Homologs in group_1295

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07895 FBDBKF_07895 69.1 Morganella morganii S1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
EHELCC_13725 EHELCC_13725 69.1 Morganella morganii S2 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_14170 NLDBIP_14170 69.1 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_08680 LHKJJB_08680 69.1 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_08230 HKOGLL_08230 69.1 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS13085 F4V73_RS13085 66.3 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator

Distribution of the homologs in the orthogroup group_1295

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1295

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q65R67 1.33e-05 47 32 2 106 3 slmA Nucleoid occlusion factor SlmA Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00740
Feature type CDS
Gene -
Product TetR/AcrR family transcriptional regulator
Location 190128 - 190763 (strand: 1)
Length 636 (nucleotides) / 211 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1295
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00440 Bacterial regulatory proteins, tetR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1309 Transcription (K) K DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Protein Sequence

MSFSRNEIDTMSGTRKRTYQLLVTTALQLFEQGMLPTVSELAAHAGVSRATAYRYFPTQSDLISATVDASLAPIIAWQPTPEDNTQQRITALLNLAYPQMFKHEGALRGALQVSLQQWAKERQSSEYTEKRFIRGHRKEILLKVIEPLKAHYPQEMWDKVIKAFSLIYGSEVFLVMKDIWKMDDQQVIDMTQWMAKAILNQAKSDFPIDND

Flanking regions ( +/- flanking 50bp)

AAAATCAGTATAGTAGCCACGAAAAGTGGAGTAATAGCGAAGGAATTTTTATGAGTTTTAGTCGTAATGAAATAGATACAATGTCAGGTACTCGAAAAAGAACCTACCAATTATTGGTGACAACGGCATTGCAACTTTTTGAACAAGGGATGTTACCTACCGTATCAGAGCTTGCAGCACATGCTGGTGTTTCAAGGGCAACGGCGTATCGCTATTTTCCCACTCAAAGTGATTTAATTAGTGCTACTGTTGATGCAAGTTTAGCACCGATCATTGCATGGCAGCCCACTCCAGAAGATAATACACAACAGCGTATTACTGCGTTGCTCAATCTTGCTTATCCACAAATGTTTAAACATGAAGGGGCGTTGCGTGGCGCATTGCAGGTTTCATTACAGCAGTGGGCTAAAGAGCGGCAATCAAGCGAATATACAGAAAAACGATTTATTCGTGGTCATCGTAAAGAGATCTTACTTAAAGTCATCGAACCATTAAAAGCGCATTATCCGCAAGAAATGTGGGATAAAGTGATAAAAGCTTTCTCACTTATTTATGGTTCTGAAGTTTTTTTAGTAATGAAAGATATCTGGAAAATGGATGATCAGCAGGTCATTGATATGACCCAATGGATGGCTAAAGCTATTTTAAATCAGGCAAAGTCAGATTTTCCGATAGATAACGATTAATTATTTGAATAAATCGGTTAAAATTGTATAAATCATTTACGTTTTAGCTA