Homologs in group_1290

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07850 FBDBKF_07850 73.4 Morganella morganii S1 yjiA GTPase
EHELCC_13680 EHELCC_13680 73.4 Morganella morganii S2 yjiA GTPase
NLDBIP_14125 NLDBIP_14125 73.4 Morganella morganii S4 yjiA GTPase
LHKJJB_08725 LHKJJB_08725 73.4 Morganella morganii S3 yjiA GTPase
HKOGLL_08275 HKOGLL_08275 73.4 Morganella morganii S5 yjiA GTPase
F4V73_RS13190 F4V73_RS13190 71.5 Morganella psychrotolerans yjiA GTPase

Distribution of the homologs in the orthogroup group_1290

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1290

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P24203 1.33e-161 456 71 1 317 1 yjiA Zinc chaperone YjiA Escherichia coli (strain K12)
Q99MB4 2.57e-40 148 29 7 344 2 Zng1 Zinc-regulated GTPase metalloprotein activator 1 Rattus norvegicus
Q8IUF1 9.65e-39 144 31 11 353 1 ZNG1B Zinc-regulated GTPase metalloprotein activator 1B Homo sapiens
B0R0B1 1.72e-38 143 30 9 354 2 zng1 Zinc-regulated GTPase metalloprotein activator 1 Danio rerio
Q9BRT8 2.41e-38 143 30 11 353 1 ZNG1A Zinc-regulated GTPase metalloprotein activator 1A Homo sapiens
Q8VEH6 4.7e-38 142 29 7 341 1 Zng1 Zinc-regulated GTPase metalloprotein activator 1 Mus musculus
Q5RIA9 1.48e-37 141 31 11 353 2 ZNG1E Zinc-regulated GTPase metalloprotein activator 1E Homo sapiens
Q5JTY5 6.88e-37 139 30 11 353 1 ZNG1C Zinc-regulated GTPase metalloprotein activator 1C Homo sapiens
Q4V339 2.06e-36 138 31 11 353 3 ZNG1F Zinc-regulated GTPase metalloprotein activator 1F Homo sapiens
Q9HZQ2 5.48e-33 128 32 14 349 3 cobW Zinc chaperone CobW Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P29937 4.05e-30 120 26 11 353 3 cobW Zinc chaperone CobW Sinorhizobium sp.
O74310 1.56e-27 114 35 6 202 3 zng1 Zinc-regulated GTPase metalloprotein activator 1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P53729 8.72e-24 103 35 6 211 1 ZNG1 Zinc-regulated GTPase metalloprotein activator 1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q869Q0 1.46e-22 100 28 11 314 3 DDB_G0274527 Zinc-regulated GTPase metalloprotein activator 1 Dictyostelium discoideum
P31521 2.53e-20 94 31 7 233 3 None Zinc chaperone P47K Pseudomonas chlororaphis
P94400 3.89e-20 93 33 9 225 2 yciC Zinc chaperone YciC Bacillus subtilis (strain 168)
P33030 2e-13 73 31 8 184 1 yeiR Zinc chaperone YeiR Escherichia coli (strain K12)
P22042 4.91e-09 55 47 0 48 4 None Uncharacterized protein in trpE 3'region (Fragment) Spirochaeta aurantia

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00695
Feature type CDS
Gene yjiA
Product GTPase
Location 178444 - 179421 (strand: 1)
Length 978 (nucleotides) / 325 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1290
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02492 CobW/HypB/UreG, nucleotide-binding domain
PF07683 Cobalamin synthesis protein cobW C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0523 General function prediction only (R) R Zinc metallochaperone YeiR/ZagA and related GTPases, G3E family

Protein Sequence

MEPIAVTILTGFLGSGKTTLLRHMLNEEHGYKIAVIENEFGEVPIDDEIIGDRATQIKTLTNGCICCSKSNELEDTLLDLCDSLDRGDIVFDRLVIECTGMADPGPITQTFFSHEVICQRYLLDGIITLVDTIHAQQQLDQFAIAQSQIGYADRILLTKTDIQPASQQLLARLRRINARAPTYTVINGQIDLALLFNVKGFMLNDTLEVKQPLFRFQPEKQDDIQSIVLNFDYPVELQAVSDVMESLLLSFADNLLRYKGILNIKDSPNRLLFQGVQRLYSADWDRPWQENETRQSTLVFIGIHLPEEEIKASFDALMHNTKEYE

Flanking regions ( +/- flanking 50bp)

TGGTAAAGGTGGTTTCCGCTGTTGCTAATAATCTGTAAAGGAGACAAATAATGGAACCTATTGCAGTAACAATATTGACTGGCTTTTTAGGATCGGGAAAAACAACGCTTTTACGCCATATGCTCAATGAGGAGCATGGCTATAAAATTGCGGTGATTGAAAATGAATTTGGTGAAGTGCCTATCGATGATGAAATTATTGGTGATAGAGCAACACAAATAAAAACACTCACCAATGGCTGTATTTGTTGTAGTAAATCGAATGAGCTTGAAGATACTTTGCTCGATCTCTGCGATAGTCTTGATCGTGGTGACATTGTGTTTGATCGCCTAGTGATTGAGTGTACAGGGATGGCTGATCCGGGGCCTATCACACAAACATTTTTTTCTCATGAAGTGATCTGCCAACGCTATTTATTAGATGGCATTATTACACTGGTTGATACAATCCATGCTCAGCAACAGTTAGATCAATTTGCTATTGCACAATCTCAAATTGGTTATGCGGATCGCATTCTATTAACTAAAACAGATATTCAACCTGCGAGCCAACAATTACTTGCTCGTTTAAGACGTATTAATGCTAGAGCGCCTACCTATACGGTGATCAATGGGCAAATAGATTTAGCACTATTATTTAACGTAAAAGGCTTTATGTTGAATGATACTTTAGAGGTCAAGCAACCCCTGTTTCGTTTTCAGCCAGAAAAACAAGATGATATTCAGTCTATTGTACTAAATTTTGATTATCCCGTTGAGTTACAAGCAGTCTCTGATGTTATGGAGTCTTTGTTATTGAGCTTTGCCGATAACTTATTACGTTATAAAGGGATCTTAAATATTAAAGATAGTCCTAACCGGTTGTTATTCCAAGGAGTGCAACGATTATATAGCGCTGATTGGGATAGACCTTGGCAAGAGAATGAAACTCGTCAAAGCACCTTAGTCTTTATTGGTATTCATCTGCCAGAAGAAGAAATAAAAGCCAGTTTCGATGCGTTAATGCATAACACTAAAGAATATGAGTAATAGCGATTGTTTGAGAAAAGTGTTTGTTGGTAGTGATGTAATAGCAGTAA