Homologs in group_1290

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07850 FBDBKF_07850 91.8 Morganella morganii S1 yjiA GTPase
EHELCC_13680 EHELCC_13680 91.8 Morganella morganii S2 yjiA GTPase
NLDBIP_14125 NLDBIP_14125 91.8 Morganella morganii S4 yjiA GTPase
LHKJJB_08725 LHKJJB_08725 91.8 Morganella morganii S3 yjiA GTPase
HKOGLL_08275 HKOGLL_08275 91.8 Morganella morganii S5 yjiA GTPase
PMI_RS00695 PMI_RS00695 71.5 Proteus mirabilis HI4320 yjiA GTPase

Distribution of the homologs in the orthogroup group_1290

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1290

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P24203 2.04e-156 442 70 1 317 1 yjiA Zinc chaperone YjiA Escherichia coli (strain K12)
Q99MB4 3.17e-39 145 31 9 343 2 Zng1 Zinc-regulated GTPase metalloprotein activator 1 Rattus norvegicus
Q8VEH6 1.66e-38 143 29 7 346 1 Zng1 Zinc-regulated GTPase metalloprotein activator 1 Mus musculus
B0R0B1 1.09e-37 140 30 9 342 2 zng1 Zinc-regulated GTPase metalloprotein activator 1 Danio rerio
Q9BRT8 1.43e-36 138 30 9 347 1 ZNG1A Zinc-regulated GTPase metalloprotein activator 1A Homo sapiens
Q5RIA9 1.49e-35 135 31 9 347 2 ZNG1E Zinc-regulated GTPase metalloprotein activator 1E Homo sapiens
Q8IUF1 2.87e-35 134 30 9 347 1 ZNG1B Zinc-regulated GTPase metalloprotein activator 1B Homo sapiens
Q9HZQ2 3.39e-35 134 31 13 354 3 cobW Zinc chaperone CobW Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q5JTY5 7.19e-35 134 30 9 347 1 ZNG1C Zinc-regulated GTPase metalloprotein activator 1C Homo sapiens
Q4V339 1.89e-34 132 31 10 349 3 ZNG1F Zinc-regulated GTPase metalloprotein activator 1F Homo sapiens
O74310 5.26e-28 115 39 6 197 3 zng1 Zinc-regulated GTPase metalloprotein activator 1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P53729 3.24e-25 107 29 14 362 1 ZNG1 Zinc-regulated GTPase metalloprotein activator 1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P94400 7.73e-25 106 29 11 306 2 yciC Zinc chaperone YciC Bacillus subtilis (strain 168)
P29937 2.3e-23 101 25 11 351 3 cobW Zinc chaperone CobW Sinorhizobium sp.
Q869Q0 3.33e-23 102 28 13 320 3 DDB_G0274527 Zinc-regulated GTPase metalloprotein activator 1 Dictyostelium discoideum
P31521 1.01e-22 100 29 9 299 3 None Zinc chaperone P47K Pseudomonas chlororaphis
P33030 1.19e-14 77 31 8 184 1 yeiR Zinc chaperone YeiR Escherichia coli (strain K12)
P22042 1.61e-08 53 45 0 48 4 None Uncharacterized protein in trpE 3'region (Fragment) Spirochaeta aurantia

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13190
Feature type CDS
Gene yjiA
Product GTPase
Location 257321 - 258280 (strand: -1)
Length 960 (nucleotides) / 319 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1290
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02492 CobW/HypB/UreG, nucleotide-binding domain
PF07683 Cobalamin synthesis protein cobW C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0523 General function prediction only (R) R Zinc metallochaperone YeiR/ZagA and related GTPases, G3E family

Protein Sequence

MQPISVTILTGFLGAGKTTLLRHILHEDHGQKIAVIENEFGEVPIDNEIIGDRATQIKTLSNGCICCSRSDELEDALLDLCDNLDKGNIDFDRLVIECTGMADPGPITQTFFSNEKLCERYVLDGIITLVDAVHAPQQLDQFTIAQAQIGYADRILLTKTDVNPDNEALITRLQRINAKAPIHKVLNGDISPDLLFNVGGFMLDDNVAVSQPVFRFAPKQQNDIQSLVITMDKPVEISAISRAMETLLLSYADNLLRYKGLLWIENEPRRLLFQGVQRLYSADFDREWRESDTKQSVLIFIGMQLPEQEIRNAFATLTA

Flanking regions ( +/- flanking 50bp)

CTATTATTTGTTACTCTGTATTCCTGTCTGTCAGTAAGAAGGATCTGATGATGCAACCTATTTCTGTGACTATTCTGACCGGTTTTCTGGGCGCCGGAAAAACGACGCTGCTGCGCCATATCCTGCATGAAGATCACGGGCAAAAAATTGCAGTGATTGAAAATGAATTTGGTGAAGTGCCGATTGATAATGAAATTATCGGCGATCGCGCTACACAAATAAAAACCCTGAGCAATGGCTGTATTTGTTGCAGCCGTTCAGATGAGCTGGAAGATGCACTGCTTGACCTGTGTGATAACCTGGATAAAGGCAATATTGATTTTGACCGCCTGGTGATTGAATGCACAGGCATGGCCGATCCCGGTCCGATTACACAAACTTTTTTCTCCAATGAAAAGCTGTGTGAGCGTTATGTTCTGGACGGTATTATCACGCTGGTGGATGCGGTTCATGCGCCGCAGCAACTGGATCAGTTTACTATCGCGCAGGCACAGATTGGCTATGCGGATCGCATTCTGCTGACCAAAACGGATGTTAATCCTGATAATGAAGCACTTATCACCCGCTTACAGCGTATTAATGCCAAAGCGCCGATCCATAAAGTGCTGAACGGTGATATCAGCCCGGATCTGTTGTTTAACGTGGGCGGTTTTATGCTGGATGACAATGTTGCTGTCAGTCAGCCGGTATTCCGCTTTGCTCCTAAGCAGCAAAATGACATTCAGTCTCTGGTGATAACCATGGACAAGCCCGTTGAAATCAGTGCTATTTCCCGTGCAATGGAGACATTGCTGCTCAGTTATGCAGATAATCTGTTGCGTTACAAAGGGCTGCTGTGGATTGAAAATGAGCCGCGCCGCTTATTATTCCAGGGTGTTCAGCGCCTGTATAGTGCGGATTTTGACCGCGAATGGCGGGAAAGTGATACCAAACAGAGCGTGCTGATTTTTATCGGAATGCAACTGCCGGAGCAGGAAATCCGTAATGCATTTGCGACCCTGACGGCGTAAAATAATGCCCGGAAAATGACACTGGTATCTGTTTGTATGGCATCAGCGGT