Homologs in group_2258

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17390 FBDBKF_17390 87.0 Morganella morganii S1 secF Preprotein translocase subunit SecF
EHELCC_17285 EHELCC_17285 87.0 Morganella morganii S2 secF Preprotein translocase subunit SecF
NLDBIP_17910 NLDBIP_17910 87.0 Morganella morganii S4 secF Preprotein translocase subunit SecF
LHKJJB_17830 LHKJJB_17830 87.0 Morganella morganii S3 secF Preprotein translocase subunit SecF
HKOGLL_17840 HKOGLL_17840 87.0 Morganella morganii S5 secF Preprotein translocase subunit SecF
F4V73_RS16565 F4V73_RS16565 86.3 Morganella psychrotolerans secF protein translocase subunit SecF

Distribution of the homologs in the orthogroup group_2258

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2258

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AG93 0.0 511 75 1 323 1 secF Protein translocase subunit SecF Escherichia coli (strain K12)
P0AG94 0.0 511 75 1 323 3 secF Protein translocase subunit SecF Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AG95 0.0 511 75 1 323 3 secF Protein translocase subunit SecF Escherichia coli O157:H7
E9RGS4 7.32e-128 370 56 0 308 1 secF Protein translocase subunit SecF Vibrio alginolyticus
P44590 1.37e-106 317 52 2 296 3 secF Protein translocase subunit SecF Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9HXI2 1.4e-90 275 47 2 302 3 secF Protein translocase subunit SecF Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A8F0L9 1.72e-75 237 42 3 290 3 secF Protein translocase subunit SecF Rickettsia massiliae (strain Mtu5)
Q4UKA5 1.19e-74 234 41 3 290 3 secF Protein translocase subunit SecF Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q92JB3 1.52e-74 234 42 3 290 3 secF Protein translocase subunit SecF Rickettsia conorii (strain ATCC VR-613 / Malish 7)
A8GM76 1.9e-74 234 42 3 290 3 secF Protein translocase subunit SecF Rickettsia akari (strain Hartford)
A8GQT5 2.17e-74 234 41 3 290 2 secF Protein translocase subunit SecF Rickettsia rickettsii (strain Sheila Smith)
Q1RH99 2.01e-73 231 41 2 281 3 secF Protein translocase subunit SecF Rickettsia bellii (strain RML369-C)
A8GYD9 2.01e-73 231 41 2 281 3 secF Protein translocase subunit SecF Rickettsia bellii (strain OSU 85-389)
A8EXI0 2.19e-73 231 40 2 281 3 secF Protein translocase subunit SecF Rickettsia canadensis (strain McKiel)
E4TJ19 1.01e-72 229 45 2 281 3 secF Protein translocase subunit SecF Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1)
Q9ZE34 1.07e-72 230 42 3 290 3 secF Protein translocase subunit SecF Rickettsia prowazekii (strain Madrid E)
Q68XY2 4.22e-72 228 41 2 281 3 secF Protein translocase subunit SecF Rickettsia typhi (strain ATCC VR-144 / Wilmington)
A0LCK8 4.93e-71 225 40 4 306 3 secF Protein translocase subunit SecF Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1)
E6W4K9 1.83e-70 224 43 2 283 3 secF Protein translocase subunit SecF Desulfurispirillum indicum (strain ATCC BAA-1389 / DSM 22839 / S5)
O33518 6.96e-63 205 37 5 314 3 secF Protein translocase subunit SecF Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
C1A8P3 3.62e-61 201 39 6 287 3 secF Protein translocase subunit SecF Gemmatimonas aurantiaca (strain DSM 14586 / JCM 11422 / NBRC 100505 / T-27)
O26073 1.33e-59 196 36 2 293 3 secF Protein translocase subunit SecF Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZJ65 2.33e-59 196 36 2 287 3 secF Protein translocase subunit SecF Helicobacter pylori (strain J99 / ATCC 700824)
D0MIN3 3.56e-57 190 38 5 261 3 secF Protein translocase subunit SecF Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10)
O33568 3.18e-56 188 38 4 301 3 secF Protein translocase subunit SecF Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)
P0C117 7.24e-56 196 37 4 310 3 secDF Protein translocase subunit SecDF Brucella abortus biovar 1 (strain 9-941)
P0C117 7.9e-07 54 30 2 110 3 secDF Protein translocase subunit SecDF Brucella abortus biovar 1 (strain 9-941)
Q2YNM0 7.24e-56 196 37 4 310 3 secDF Protein translocase subunit SecDF Brucella abortus (strain 2308)
Q2YNM0 7.9e-07 54 30 2 110 3 secDF Protein translocase subunit SecDF Brucella abortus (strain 2308)
D1CDJ6 8.2e-53 179 34 8 320 3 secF Protein translocase subunit SecF Thermobaculum terrenum (strain ATCC BAA-798 / CCMEE 7001 / YNP1)
B2KBZ0 1.59e-52 178 35 6 285 3 secF Protein translocase subunit SecF Elusimicrobium minutum (strain Pei191)
E3F0U0 2.16e-52 178 33 3 305 3 secF Protein translocase subunit SecF Ketogulonicigenium vulgare (strain Y25)
D1AMK8 7.21e-51 173 35 6 310 3 secF Protein translocase subunit SecF Sebaldella termitidis (strain ATCC 33386 / NCTC 11300)
B1H0M3 2.01e-50 172 33 5 301 3 secF Protein translocase subunit SecF Endomicrobium trichonymphae
Q5SKE6 2.69e-50 181 39 4 270 1 secDF Protein translocase subunit SecDF Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
B5YIG8 3.64e-50 171 35 6 298 3 secF Protein translocase subunit SecF Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
Q1IVE8 1.57e-48 170 47 0 178 3 secF Protein translocase subunit SecF Koribacter versatilis (strain Ellin345)
D2RLC7 3.34e-48 166 34 5 282 3 secF Protein translocase subunit SecF Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / CCUG 9996 / CIP 106432 / VR4)
A9BG78 2.03e-47 164 33 6 304 3 secF Protein translocase subunit SecF Petrotoga mobilis (strain DSM 10674 / SJ95)
O67536 1.31e-46 162 39 5 306 3 secF Protein translocase subunit SecF Aquifex aeolicus (strain VF5)
O51597 1.15e-45 160 31 5 297 3 secF Protein translocase subunit SecF Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
B8E2N2 1.03e-41 149 32 5 286 3 secF Protein translocase subunit SecF Dictyoglomus turgidum (strain DSM 6724 / Z-1310)
B0CEA6 7.14e-41 148 31 5 270 3 secF Protein translocase subunit SecF Acaryochloris marina (strain MBIC 11017)
C8WQG6 1.35e-40 147 33 5 286 3 secF Protein translocase subunit SecF Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / BCRC 14685 / JCM 5260 / KCTC 1825 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 / 104-IA)
Q53956 1.58e-38 143 31 6 297 3 secF Protein translocase subunit SecF Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q55611 3.59e-38 140 31 8 299 3 secF Protein translocase subunit SecF Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
B1XQC0 3.21e-36 135 34 5 259 3 secF Protein translocase subunit SecF Picosynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)
E8N5I9 4.77e-35 132 30 7 281 3 secF Protein translocase subunit SecF Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1)
Q7VCH2 5.24e-35 132 29 5 274 3 secF Protein translocase subunit SecF Prochlorococcus marinus (strain SARG / CCMP1375 / SS120)
O32047 6.17e-34 134 33 5 287 1 secDF Protein translocase subunit SecDF Bacillus subtilis (strain 168)
O32047 1.57e-05 50 25 5 198 1 secDF Protein translocase subunit SecDF Bacillus subtilis (strain 168)
P9WGN8 3.56e-21 96 26 4 290 3 secF Protein translocase subunit SecF Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P9WGN9 4.12e-21 96 26 4 290 1 secF Protein translocase subunit SecF Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P38386 4.21e-20 94 27 6 284 3 secF Protein translocase subunit SecF Mycobacterium leprae (strain TN)
O83426 1.03e-18 89 37 2 164 3 secF Protein translocase subunit SecF Treponema pallidum (strain Nichols)
C7JGJ8 3.16e-12 70 27 3 152 3 secD Protein translocase subunit SecD Acetobacter pasteurianus (strain NBRC 105184 / IFO 3283-01)
Q57575 5.71e-12 69 27 3 158 3 secD Protein-export membrane protein SecD Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58650 1.64e-11 67 26 6 242 3 secF Protein-export membrane protein SecF Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
D4GTK4 5.6e-11 65 23 5 240 1 secF Protein-export membrane protein SecF Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
E4TJ18 9.28e-11 66 27 4 173 3 secD Protein translocase subunit SecD Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1)
B2KBZ1 9.37e-11 65 26 4 175 3 secD Protein translocase subunit SecD Elusimicrobium minutum (strain Pei191)
Q1RIN3 2.06e-10 65 28 5 174 3 secD Protein translocase subunit SecD Rickettsia bellii (strain RML369-C)
E6W4K8 1.58e-08 59 26 5 165 3 secD Protein translocase subunit SecD Desulfurispirillum indicum (strain ATCC BAA-1389 / DSM 22839 / S5)
O83425 2.19e-08 58 28 5 176 3 secD Protein translocase subunit SecD Treponema pallidum (strain Nichols)
Q8U4B4 5e-08 57 25 5 164 3 secD Protein-export membrane protein SecD Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
E1RHR2 1.23e-07 55 25 10 253 3 secF Protein-export membrane protein SecF Methanolacinia petrolearia (strain DSM 11571 / OCM 486 / SEBR 4847)
B0CEA7 2.43e-07 55 24 3 170 3 secD Protein translocase subunit SecD Acaryochloris marina (strain MBIC 11017)
O51596 3e-07 55 23 2 166 3 secD Protein translocase subunit SecD Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
Q4UKW3 4e-07 55 28 4 164 3 secD Protein translocase subunit SecD Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
D0MIN4 4.31e-07 55 23 2 158 3 secD Protein translocase subunit SecD Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10)
Q9ZFF8 4.87e-07 54 25 4 172 3 secD Protein translocase subunit SecD Salmonella choleraesuis (strain SC-B67)
Q2IKX9 5.86e-07 54 23 3 167 3 secD Protein translocase subunit SecD Anaeromyxobacter dehalogenans (strain 2CP-C)
O26074 6.03e-07 54 26 6 167 3 secD Protein translocase subunit SecD Helicobacter pylori (strain ATCC 700392 / 26695)
C1A8P2 6.15e-07 54 30 4 167 3 secD Protein translocase subunit SecD Gemmatimonas aurantiaca (strain DSM 14586 / JCM 11422 / NBRC 100505 / T-27)
P44591 7.61e-07 54 23 5 179 3 secD Protein translocase subunit SecD Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9ZJ66 7.9e-07 53 24 5 165 3 secD Protein translocase subunit SecD Helicobacter pylori (strain J99 / ATCC 700824)
Q92H77 1.04e-06 53 28 3 162 3 secD Protein translocase subunit SecD Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q55610 1.13e-06 53 26 2 148 3 secD Protein translocase subunit SecD Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
B8E2N3 2.36e-06 52 25 4 164 3 secD Protein translocase subunit SecD Dictyoglomus turgidum (strain DSM 6724 / Z-1310)
A9BG79 2.65e-06 52 25 3 165 3 secD Protein translocase subunit SecD Petrotoga mobilis (strain DSM 10674 / SJ95)
C5A3H4 4.01e-06 52 25 3 162 3 secD Protein-export membrane protein SecD Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
B1H0M4 4.13e-06 51 26 3 149 3 secD Protein translocase subunit SecD Endomicrobium trichonymphae
O67102 4.25e-06 51 23 2 162 3 secD Protein translocase subunit SecD Aquifex aeolicus (strain VF5)
A0LCK9 6.15e-06 51 23 3 163 3 secD Protein translocase subunit SecD Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1)
Q9HXI1 7.41e-06 51 26 5 167 3 secD Protein translocase subunit SecD Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
E9RGS3 7.94e-06 51 22 3 149 1 secD Protein translocase subunit SecD Vibrio alginolyticus
Q9ZCW8 1.08e-05 50 28 4 164 3 secD Protein translocase subunit SecD Rickettsia prowazekii (strain Madrid E)
Q18FQ7 2.18e-05 48 21 8 273 3 secF Protein-export membrane protein SecF Haloquadratum walsbyi (strain DSM 16790 / HBSQ001)
C5A3H3 3.11e-05 48 22 10 289 3 secF Protein-export membrane protein SecF Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
O26936 3.8e-05 48 22 7 206 3 secF Protein-export membrane protein SecF Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
P0AG92 4.29e-05 48 23 4 172 3 secD Protein translocase subunit SecD Shigella flexneri
P0AG90 4.29e-05 48 23 4 172 1 secD Protein translocase subunit SecD Escherichia coli (strain K12)
P0AG91 4.29e-05 48 23 4 172 3 secD Protein translocase subunit SecD Escherichia coli O157:H7
Q1IVE9 4.56e-05 48 24 4 169 3 secD Protein translocase subunit SecD Koribacter versatilis (strain Ellin345)
Q68WF2 7.13e-05 48 27 4 164 3 secD Protein translocase subunit SecD Rickettsia typhi (strain ATCC VR-144 / Wilmington)
E8N5I8 7.46e-05 47 22 3 152 3 secD Protein translocase subunit SecD Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1)
Q8TWM4 0.000149 46 26 4 144 3 secD Protein-export membrane protein SecD Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
C8WQG7 0.000153 47 26 10 197 3 secD Protein translocase subunit SecD Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / BCRC 14685 / JCM 5260 / KCTC 1825 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 / 104-IA)
Q7VCH3 0.000184 46 24 4 157 3 secD Protein translocase subunit SecD Prochlorococcus marinus (strain SARG / CCMP1375 / SS120)
O33517 0.000193 46 19 4 177 3 secD Protein translocase subunit SecD Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
D1AMK9 0.000209 46 22 4 160 3 secD Protein translocase subunit SecD Sebaldella termitidis (strain ATCC 33386 / NCTC 11300)
Q8U4B5 0.000245 45 28 3 96 3 secF Protein-export membrane protein SecF Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
C7NC37 0.000337 45 25 7 181 3 secD Protein translocase subunit SecD Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249 / C-1013-b)
B5YIG9 0.000713 44 24 4 158 3 secD Protein translocase subunit SecD Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00380
Feature type CDS
Gene secF
Product protein translocase subunit SecF
Location 107820 - 108788 (strand: 1)
Length 969 (nucleotides) / 322 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2258
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02355 Protein export membrane protein
PF07549 SecD/SecF GG Motif

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0341 Intracellular trafficking, secretion, and vesicular transport (U) U Preprotein translocase subunit SecF

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03074 preprotein translocase subunit SecF Protein export
Bacterial secretion system		 -

Protein Sequence

MAQDYTVEQLNHGRKVIDFMRWDNVAFTISFLLLVASIAIISVKGFNWGLDFTGGTVIEINLSQPADLDKMRDSLAAAGYKDPLLQNFGSSRDIMVRMPPVEGQAGQELGKKVIDIINVEIDNDATVKRIEFVGPSVGSELAQTGAMALLSALICILIYVGFRFEWRLALGAVISLAHDVVITLGILSLFQIEVDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTSYEIMNVSLTQTLSRTIMTSATTLLVVLMLYIFGGSMLKGFSLVMLIGVSFGTVSSIYVASALALKMGMKREHLIVQKVEKEGADQTTLLP

Flanking regions ( +/- flanking 50bp)

GCTGTATGGCGGTAAACGCATCAAGAAACTGTCTATTTAAGGAGCACGTTGTGGCACAGGATTATACTGTTGAACAATTAAACCATGGTCGTAAAGTCATTGACTTTATGCGTTGGGACAACGTCGCCTTTACTATTTCGTTTCTGCTTTTGGTAGCATCTATTGCTATCATTTCCGTGAAAGGATTTAACTGGGGATTAGATTTTACTGGAGGAACGGTTATTGAGATCAATCTCAGTCAACCGGCCGATCTAGATAAAATGCGTGATAGCTTGGCAGCCGCCGGCTATAAAGATCCTCTGTTACAAAACTTTGGTAGCAGCCGCGATATTATGGTGCGTATGCCTCCTGTTGAAGGACAGGCTGGTCAAGAATTAGGTAAGAAAGTCATCGATATTATCAATGTTGAAATTGATAATGATGCAACAGTCAAACGTATTGAATTTGTTGGGCCAAGTGTCGGGAGTGAATTGGCTCAAACAGGGGCAATGGCGTTACTTTCTGCACTTATCTGTATTCTGATCTATGTTGGATTCCGTTTTGAGTGGCGTCTAGCATTAGGGGCTGTTATTTCACTTGCCCATGACGTGGTGATCACTTTGGGTATTTTATCACTCTTCCAAATTGAAGTTGATTTAACCATTGTGGCGTCATTGATGTCTGTTATCGGTTATTCCTTGAACGATAGTATCGTGGTATCAGATCGTATTCGTGAGAATTTCCGTAAAATTCGTCGTGGTACCTCTTATGAGATCATGAACGTTTCATTAACACAGACATTAAGCCGTACCATCATGACATCAGCAACAACATTATTAGTTGTGTTGATGCTCTATATCTTTGGTGGTTCAATGCTTAAAGGCTTCTCTTTAGTGATGTTAATCGGTGTTTCATTCGGTACTGTTTCATCTATTTATGTGGCTTCTGCATTAGCACTGAAAATGGGCATGAAACGCGAACACCTGATTGTTCAAAAAGTGGAAAAAGAGGGTGCAGATCAGACAACACTCTTACCTTAATAGAGCGTTTTTCTGACATAAACATCGCAAACACCCTGCCAGTTAATGAC