Orthogroup:group_2258



Homologs in group_2258

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17390 FBDBKF_17390 Morganella morganii S1 secF Preprotein translocase subunit SecF
EHELCC_17285 EHELCC_17285 Morganella morganii S2 secF Preprotein translocase subunit SecF
NLDBIP_17910 NLDBIP_17910 Morganella morganii S4 secF Preprotein translocase subunit SecF
LHKJJB_17830 LHKJJB_17830 Morganella morganii S3 secF Preprotein translocase subunit SecF
HKOGLL_17840 HKOGLL_17840 Morganella morganii S5 secF Preprotein translocase subunit SecF
F4V73_RS16565 F4V73_RS16565 Morganella psychrotolerans secF protein translocase subunit SecF
PMI_RS00380 PMI_RS00380 Proteus mirabilis HI4320 secF protein translocase subunit SecF

Distribution of group_2258 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2258 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2258

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2258.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 secF 7

Product

# Product Occurence
1 Preprotein translocase subunit SecF 5
2 protein translocase subunit SecF 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0341 7 U Intracellular trafficking, secretion, and vesicular transport (U) Preprotein translocase subunit SecF

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03074 7 preprotein translocase subunit SecF Protein export
Bacterial secretion system
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02355 7 Protein export membrane protein
PF07549 7 SecD/SecF GG Motif

Annotations of the 104 SwissProt hits

Annotation Number of occurrences
Protein translocase subunit SecD 39
Protein translocase subunit SecDF 4
Protein translocase subunit SecF 48
Protein-export membrane protein SecD 5
Protein-export membrane protein SecF 8

Protein length

Unique protein length 322

Protein length distribution