Homologs in group_400

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16055 FBDBKF_16055 30.2 Morganella morganii S1 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
EHELCC_18660 EHELCC_18660 30.2 Morganella morganii S2 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
NLDBIP_17490 NLDBIP_17490 30.2 Morganella morganii S4 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
LHKJJB_17170 LHKJJB_17170 30.2 Morganella morganii S3 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
HKOGLL_17225 HKOGLL_17225 30.2 Morganella morganii S5 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
F4V73_RS16215 F4V73_RS16215 30.6 Morganella psychrotolerans ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
PMI_RS10730 PMI_RS10730 29.0 Proteus mirabilis HI4320 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA

Distribution of the homologs in the orthogroup group_400

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_400

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P54602 7.83e-82 280 32 11 522 1 yhcR Endonuclease YhcR Bacillus subtilis (strain 168)
Q8YAJ5 5.31e-59 212 30 14 534 1 lmo0130 Cell wall protein Lmo0130 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
P07778 1.85e-42 154 42 5 197 4 None Uncharacterized protein in pqq-V 5'region (Fragment) Acinetobacter calcoaceticus
A9BJC1 6.95e-41 157 29 19 510 1 mggB Mannosylglucosyl-3-phosphoglycerate phosphatase Petrotoga mobilis (strain DSM 10674 / SJ95)
O34313 1.05e-33 140 27 21 515 1 yfkN Trifunctional nucleotide phosphoesterase protein YfkN Bacillus subtilis (strain 168)
O34313 7.6e-19 94 23 23 566 1 yfkN Trifunctional nucleotide phosphoesterase protein YfkN Bacillus subtilis (strain 168)
Q8DFG4 2.63e-29 125 26 25 584 3 nutA 5'-nucleotidase Vibrio vulnificus (strain CMCP6)
P22848 5.2e-28 121 25 24 591 3 nutA 5'-nucleotidase Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q9KQ30 1.64e-27 119 26 26 576 3 nutA 5'-nucleotidase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q56878 8.7e-27 117 24 21 579 3 ushA Protein UshA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P07024 8.18e-26 114 24 21 571 1 ushA Protein UshA Escherichia coli (strain K12)
P06196 1.58e-24 110 24 23 559 3 ushA Silent protein UshA(0) Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9RN37 2.57e-23 107 24 23 559 3 ushA Protein UshA Salmonella pullorum
B3A0N5 3.02e-22 103 22 20 550 1 APY Apyrase Tabanus yao
P52307 5.57e-22 103 25 22 565 1 None Protein 5NUC (Fragment) Rhipicephalus microplus
O83142 1.81e-19 95 22 23 629 3 TP_0104 Probable 5'-nucleotidase Treponema pallidum (strain Nichols)
P44569 7.36e-16 84 22 22 609 1 HI_0206 NAD 5'-nucleotidase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44764 2.15e-15 82 22 23 590 3 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A0A2I4HXH5 2.84e-15 82 22 20 527 1 None Snake venom 5'-nucleotidase (Fragment) Naja atra
Q9XZ43 4.56e-15 81 23 23 534 1 5NUC Protein 5NUC Lutzomyia longipalpis
P08331 4.57e-14 78 20 16 578 1 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase Escherichia coli (strain K12)
P29240 1.54e-13 77 22 21 566 2 None 5'-nucleotidase Diplobatis ommata
B6EWW8 4.31e-13 75 22 16 520 2 None Snake venom 5'-nucleotidase Gloydius brevicauda
P26265 7.72e-13 74 21 15 578 3 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q05927 2.43e-12 73 22 20 527 1 NT5E 5'-nucleotidase Bos taurus
P53052 2.9e-12 73 20 20 559 3 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase Yersinia enterocolitica
P21589 3.24e-12 72 22 21 540 1 NT5E 5'-nucleotidase Homo sapiens
F8S0Z7 5.04e-12 72 22 17 520 1 None Snake venom 5'-nucleotidase Crotalus adamanteus
Q61503 1.81e-11 70 22 21 534 1 Nt5e 5'-nucleotidase Mus musculus
P21588 3.37e-10 66 22 18 515 1 Nt5e 5'-nucleotidase Rattus norvegicus
E0D877 2.71e-09 63 22 18 491 1 APY Apyrase Aedes albopictus
P50635 3.48e-09 63 21 19 553 1 APY Apyrase Aedes aegypti
W8EFS0 1.25e-05 51 26 7 168 1 None Snake venom 5'-nucleotidase (Fragment) Macrovipera lebetina

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00230
Feature type CDS
Gene -
Product bifunctional metallophosphatase/5'-nucleotidase
Location 71104 - 72726 (strand: 1)
Length 1623 (nucleotides) / 540 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_400
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00149 Calcineurin-like phosphoesterase
PF02872 5'-nucleotidase, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0737 Nucleotide transport and metabolism (F)
Defense mechanisms (V)		 FV 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family

Kegg Ortholog Annotation(s)

Protein Sequence

MNHKYKLVALAVSSVLLAGCAKNYDEANVVDVRVIALNDFHGALKAPGPNKPGGIEHMATLVKELKKDNPNNIVVAAGDMVGASPLLSSMFHDEPTIEALSLAGLEATSVGNHEFDKGMGELLRKQNGGCHPVTGCQGPTEFKGADFQYLAANVTVNETGKTLFPEYVIKEFNGIPVAFIGLTLEGTAAIVTPKGTEGLSFHNEAKTINALVPKLQAQGVQAIGVLIHEGAAQRRDGGPVNINACNGITGKVLGVVEQLDPAVDFVVTGHTHQAYNCTINGRSVTSAQSNGAMLTRIDLKLDKTTKDVVDVEARNIWVDNRKYEKDPAVTKLLEAYEKIATPLANRIIGKLEGNLTKQTNDAGESGLGQVIADAHLYTAKPKDMGGAQIALMNSGGIRADMTGGDVSYNAIYTVQPFSNVLLTQTLTGEQIKRLLEQQWDRSRPQVLAVSGNFQYTWDSKAPVGQRVIVESMRIDGKPVDMKANYRVVANEYLATGGSNFSVLKEGKDPVYSVPDVDAVVKYFAEQSPIAQPKANNITRK

Flanking regions ( +/- flanking 50bp)

AAGTGATTGATTGTCCGAAACGTGAATATTGATCTAGGGATAAAACTTAAATGAACCATAAATATAAACTCGTAGCCCTTGCAGTAAGCTCCGTCTTATTAGCAGGTTGTGCTAAAAATTATGACGAAGCGAACGTCGTTGATGTCCGAGTGATTGCACTCAATGACTTCCATGGTGCATTAAAAGCACCAGGTCCAAACAAGCCTGGTGGTATTGAGCATATGGCTACGCTGGTCAAAGAGCTGAAAAAAGATAACCCAAATAATATTGTGGTAGCTGCCGGTGATATGGTTGGTGCTAGCCCACTGTTATCTTCAATGTTCCATGATGAGCCAACTATTGAAGCGCTGTCATTAGCAGGTTTAGAAGCAACTTCAGTGGGTAACCACGAATTTGATAAAGGTATGGGTGAGTTACTGCGTAAGCAAAACGGTGGTTGCCATCCAGTTACAGGTTGTCAAGGTCCTACTGAATTTAAAGGTGCTGATTTCCAATATTTAGCGGCTAACGTGACTGTTAACGAAACAGGTAAAACGTTATTCCCTGAATATGTGATTAAAGAGTTCAATGGTATTCCGGTTGCCTTTATTGGTTTAACTTTAGAAGGTACTGCGGCTATCGTGACACCAAAAGGAACTGAAGGTTTAAGCTTCCACAATGAAGCAAAAACAATCAACGCTTTAGTGCCTAAGTTACAAGCTCAAGGTGTACAGGCGATTGGTGTTCTGATCCACGAAGGTGCTGCACAGCGCCGTGATGGTGGTCCAGTAAATATCAACGCATGTAATGGTATTACAGGTAAAGTACTTGGTGTGGTTGAACAATTAGATCCAGCGGTTGACTTTGTTGTAACGGGTCATACTCACCAAGCTTATAACTGTACTATTAACGGTAGATCAGTGACTTCTGCACAATCTAATGGCGCCATGTTAACGCGTATCGACCTGAAATTAGATAAAACAACGAAAGATGTTGTTGATGTAGAAGCGCGTAATATTTGGGTTGATAACCGCAAATATGAAAAAGATCCTGCTGTCACTAAACTGTTAGAAGCTTACGAGAAAATTGCTACACCATTAGCGAACCGTATTATTGGTAAACTAGAAGGTAACTTAACCAAGCAAACTAACGATGCGGGCGAATCGGGTCTAGGTCAAGTTATTGCTGATGCCCATTTATATACGGCAAAACCAAAAGATATGGGTGGCGCACAAATCGCCTTAATGAACAGTGGTGGTATTCGTGCTGATATGACGGGTGGTGATGTTTCTTATAACGCTATTTATACCGTACAACCATTCTCTAATGTACTGTTAACACAAACATTAACGGGTGAGCAGATCAAACGCTTATTAGAGCAACAGTGGGATCGTTCACGTCCACAAGTATTAGCGGTATCGGGTAATTTCCAATATACATGGGACAGCAAAGCACCTGTTGGACAACGTGTGATTGTTGAATCAATGCGTATTGATGGTAAGCCTGTGGATATGAAAGCGAATTACCGTGTAGTTGCAAATGAATACTTAGCAACAGGTGGTAGTAACTTCTCTGTACTGAAAGAAGGTAAAGATCCGGTTTACAGCGTGCCAGATGTTGATGCAGTAGTGAAATACTTTGCTGAGCAGTCACCTATTGCTCAACCAAAAGCGAACAACATTACTCGTAAATAACATATTTTCATACGCCTTGTGAAAATAGCACCTCTTACGAGAGGTGCGTA