Homologs in group_1122

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06395 FBDBKF_06395 60.9 Morganella morganii S1 exbB tonB-system energizer ExbB
EHELCC_09440 EHELCC_09440 60.9 Morganella morganii S2 exbB tonB-system energizer ExbB
NLDBIP_09820 NLDBIP_09820 60.9 Morganella morganii S4 exbB tonB-system energizer ExbB
LHKJJB_07935 LHKJJB_07935 60.9 Morganella morganii S3 exbB tonB-system energizer ExbB
HKOGLL_07485 HKOGLL_07485 60.9 Morganella morganii S5 exbB tonB-system energizer ExbB
F4V73_RS15530 F4V73_RS15530 58.8 Morganella psychrotolerans exbB tonB-system energizer ExbB

Distribution of the homologs in the orthogroup group_1122

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1122

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ABU7 1.01e-97 291 64 0 221 1 exbB Biopolymer transport protein ExbB Escherichia coli (strain K12)
P0ABU8 1.01e-97 291 64 0 221 3 exbB Biopolymer transport protein ExbB Escherichia coli O157:H7
P0A1H7 3.19e-97 290 64 0 223 3 exbB Biopolymer transport protein ExbB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1H8 3.19e-97 290 64 0 223 3 exbB Biopolymer transport protein ExbB Salmonella typhi
Q05605 3.78e-85 263 59 1 226 3 exbB Biopolymer transport protein ExbB Pseudomonas putida
P50598 1.18e-29 116 37 5 206 3 tolQ Tol-Pal system protein TolQ Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0ABV1 3.23e-26 107 36 2 191 3 tolQ Tol-Pal system protein TolQ Shigella flexneri
P0ABU9 3.23e-26 107 36 2 191 1 tolQ Tol-Pal system protein TolQ Escherichia coli (strain K12)
P0ABV0 3.23e-26 107 36 2 191 3 tolQ Tol-Pal system protein TolQ Escherichia coli O157:H7
P43768 6.24e-24 100 29 4 222 3 tolQ Tol-Pal system protein TolQ Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P95375 2.42e-22 96 35 5 204 3 exbB Biopolymer transport protein ExbB Neisseria meningitidis serogroup C
P64100 1.02e-21 94 34 3 201 3 exbB Biopolymer transport protein ExbB Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P64099 1.02e-21 94 34 3 201 3 exbB Biopolymer transport protein ExbB Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
O06433 6.19e-21 92 33 3 201 3 exbB Biopolymer transport protein ExbB Neisseria gonorrhoeae
P0C7L9 7.51e-14 73 46 1 84 3 exbB Biopolymer transport protein ExbB Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
B0RLE6 7.51e-14 73 46 1 84 3 exbB Biopolymer transport protein ExbB Xanthomonas campestris pv. campestris (strain B100)
Q9ZJH1 1.5e-10 62 34 1 93 3 jhp_1338 Putative biopolymer transport protein ExbB-like 2 Helicobacter pylori (strain J99 / ATCC 700824)
O25986 1.59e-10 62 34 1 93 3 HP_1445 Putative biopolymer transport protein ExbB-like 2 Helicobacter pylori (strain ATCC 700392 / 26695)
O25755 8.43e-09 58 27 7 221 3 HP_1130 Putative biopolymer transport protein ExbB-like 1 Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZK83 1.09e-08 57 27 7 221 3 jhp_1058 Putative biopolymer transport protein ExbB-like 1 Helicobacter pylori (strain J99 / ATCC 700824)
P43008 7.19e-08 54 37 1 83 3 exbB Biopolymer transport protein ExbB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O51808 8.09e-07 51 40 1 77 3 exbB Biopolymer transport protein ExbB Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q9ZJP6 4.83e-06 49 34 0 91 3 exbB Biopolymer transport protein ExbB Helicobacter pylori (strain J99 / ATCC 700824)
O25897 5.12e-06 48 34 0 91 3 exbB Biopolymer transport protein ExbB Helicobacter pylori (strain ATCC 700392 / 26695)
P72202 8.07e-06 48 39 1 71 3 exbB Biopolymer transport protein ExbB Mannheimia haemolytica

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00140
Feature type CDS
Gene exbB
Product tonB-system energizer ExbB
Location 50098 - 51108 (strand: 1)
Length 1011 (nucleotides) / 336 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1122
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01618 MotA/TolQ/ExbB proton channel family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0811 Intracellular trafficking, secretion, and vesicular transport (U) U Biopolymer transport protein ExbB/TolQ

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03561 biopolymer transport protein ExbB - -

Protein Sequence

MRNLTASIILAIGLTGSAFADTTPAKQTEQPATTATSSTASTQGTATTTIAPTAENTATPTGEAAKTATSETPVAEENTSTSTGDAAQTALEPENATQGATPEIVTGGGFAEDLSVMGMYRNADLVVKSVMIGLLLASIVTWALFFAKGSYLLALRRRLRNESAQLVEAKSLKEALAISQKFGNKSATADFFNDAELERTYSQDSHVASGIKERVEMRMERRVAAIIRELGRGNGYLATIGAISPFIGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAIGLIAAIPAVIIYNIFARMISGYRGEIGDIATGVVTLVSRDLDIENSKSR

Flanking regions ( +/- flanking 50bp)

TTCATTACTGAATAGATAATTAGATAAGAAAGAGAGTAAAAGGCCAACTGATGCGTAATTTGACAGCTTCTATTATATTGGCAATCGGTCTGACAGGCTCTGCTTTTGCGGATACGACACCGGCTAAGCAAACTGAGCAACCTGCGACTACGGCCACTTCTTCAACCGCTTCTACACAGGGAACGGCGACTACAACGATTGCACCAACAGCAGAAAATACGGCAACGCCAACGGGGGAAGCAGCCAAAACGGCAACTTCTGAAACACCAGTGGCAGAAGAGAATACATCGACGAGCACAGGAGATGCTGCACAGACAGCTCTAGAGCCAGAAAATGCCACGCAAGGTGCGACACCTGAAATCGTCACTGGAGGGGGATTTGCTGAAGATCTCTCTGTTATGGGAATGTATCGCAATGCAGATCTCGTGGTAAAAAGTGTCATGATCGGTTTGCTACTCGCCTCTATTGTCACTTGGGCGCTGTTCTTTGCTAAAGGTAGCTACTTATTAGCATTACGTCGTCGTTTAAGAAATGAAAGTGCGCAATTAGTAGAAGCGAAATCCCTCAAAGAGGCATTAGCGATTAGCCAAAAATTTGGCAATAAAAGTGCGACAGCCGATTTTTTTAATGATGCTGAATTAGAGCGTACTTACTCTCAAGATAGTCACGTTGCATCCGGTATTAAAGAGCGTGTTGAGATGCGCATGGAGCGTCGTGTCGCGGCTATTATTCGTGAATTAGGACGTGGTAATGGTTATTTAGCGACCATTGGGGCAATTTCTCCTTTTATCGGTTTGTTTGGTACGGTTTGGGGGATCATGAATAGTTTTATTGGTATTGCGCATTCTCAAACTACCAACTTAGCGGTGGTTGCCCCCGGTATCGCAGAAGCATTATTAGCAACCGCCATCGGCTTGATTGCAGCTATCCCTGCGGTCATTATTTACAATATTTTTGCACGTATGATTTCCGGTTATCGTGGTGAAATTGGCGATATTGCAACAGGTGTAGTGACCTTAGTCAGTCGTGACTTAGATATTGAAAACAGCAAATCAAGGTAATGAATTATGGCAATGAATCTTGGTAATGATTCAGGTGAAGATAATGAATT