COG0811


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0811, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Biopolymer transport protein ExbB/TolQ
Function(s) descr. Intracellular trafficking, secretion, and vesicular transport (U)

Occurence in the database

COG0811 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1122 FBDBKF_06395 113741 114649 -1 exbB tonB-system energizer ExbB Morganella morganii S1
1 group_1509 FBDBKF_09755 47011 47697 -1 tolQ Tol-Pal system protein TolQ Morganella morganii S1
2 group_1509 EHELCC_04555 238976 239662 -1 tolQ Tol-Pal system protein TolQ Morganella morganii S2
3 group_1122 EHELCC_09440 114313 115221 -1 exbB tonB-system energizer ExbB Morganella morganii S2
4 group_1509 NLDBIP_04555 238772 239458 -1 tolQ Tol-Pal system protein TolQ Morganella morganii S4
5 group_1122 NLDBIP_09820 114313 115221 -1 exbB tonB-system energizer ExbB Morganella morganii S4
6 group_1122 LHKJJB_07935 102017 102925 1 exbB tonB-system energizer ExbB Morganella morganii S3
7 group_1509 LHKJJB_14075 95920 96606 1 tolQ Tol-Pal system protein TolQ Morganella morganii S3
8 group_1122 HKOGLL_07485 102017 102925 1 exbB tonB-system energizer ExbB Morganella morganii S5
9 group_1509 HKOGLL_12460 47792 48478 -1 tolQ Tol-Pal system protein TolQ Morganella morganii S5
10 group_1509 F4V73_RS00585 124917 125603 1 tolQ Tol-Pal system protein TolQ Morganella psychrotolerans
11 group_1122 F4V73_RS15530 99366 100307 1 exbB tonB-system energizer ExbB Morganella psychrotolerans
12 group_1122 PMI_RS00140 50098 51108 1 exbB tonB-system energizer ExbB Proteus mirabilis HI4320
13 group_1509 PMI_RS02855 628196 628882 1 tolQ Tol-Pal system protein TolQ Proteus mirabilis HI4320