Homologs in group_1122

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06395 FBDBKF_06395 100.0 Morganella morganii S1 exbB tonB-system energizer ExbB
NLDBIP_09820 NLDBIP_09820 100.0 Morganella morganii S4 exbB tonB-system energizer ExbB
LHKJJB_07935 LHKJJB_07935 100.0 Morganella morganii S3 exbB tonB-system energizer ExbB
HKOGLL_07485 HKOGLL_07485 100.0 Morganella morganii S5 exbB tonB-system energizer ExbB
F4V73_RS15530 F4V73_RS15530 80.9 Morganella psychrotolerans exbB tonB-system energizer ExbB
PMI_RS00140 PMI_RS00140 60.9 Proteus mirabilis HI4320 exbB tonB-system energizer ExbB

Distribution of the homologs in the orthogroup group_1122

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1122

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A1H7 4.47e-100 296 65 0 225 3 exbB Biopolymer transport protein ExbB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1H8 4.47e-100 296 65 0 225 3 exbB Biopolymer transport protein ExbB Salmonella typhi
P0ABU7 2.3e-98 292 63 0 230 1 exbB Biopolymer transport protein ExbB Escherichia coli (strain K12)
P0ABU8 2.3e-98 292 63 0 230 3 exbB Biopolymer transport protein ExbB Escherichia coli O157:H7
Q05605 1.47e-84 260 56 1 236 3 exbB Biopolymer transport protein ExbB Pseudomonas putida
P50598 6.75e-29 113 36 4 204 3 tolQ Tol-Pal system protein TolQ Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P43768 1.47e-28 112 34 6 223 3 tolQ Tol-Pal system protein TolQ Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0ABV1 1.67e-22 96 36 6 208 3 tolQ Tol-Pal system protein TolQ Shigella flexneri
P0ABU9 1.67e-22 96 36 6 208 1 tolQ Tol-Pal system protein TolQ Escherichia coli (strain K12)
P0ABV0 1.67e-22 96 36 6 208 3 tolQ Tol-Pal system protein TolQ Escherichia coli O157:H7
P95375 1.37e-21 94 31 3 207 3 exbB Biopolymer transport protein ExbB Neisseria meningitidis serogroup C
P64100 2.76e-21 93 30 4 209 3 exbB Biopolymer transport protein ExbB Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P64099 2.76e-21 93 30 4 209 3 exbB Biopolymer transport protein ExbB Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
O06433 7.41e-21 92 30 4 209 3 exbB Biopolymer transport protein ExbB Neisseria gonorrhoeae
P0C7L9 9.46e-14 73 44 1 89 3 exbB Biopolymer transport protein ExbB Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
B0RLE6 9.46e-14 73 44 1 89 3 exbB Biopolymer transport protein ExbB Xanthomonas campestris pv. campestris (strain B100)
O25986 2.1e-10 61 44 0 67 3 HP_1445 Putative biopolymer transport protein ExbB-like 2 Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZJH1 2.1e-10 61 44 0 67 3 jhp_1338 Putative biopolymer transport protein ExbB-like 2 Helicobacter pylori (strain J99 / ATCC 700824)
O25755 9.13e-10 60 26 3 192 3 HP_1130 Putative biopolymer transport protein ExbB-like 1 Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZK83 1.65e-09 59 26 3 192 3 jhp_1058 Putative biopolymer transport protein ExbB-like 1 Helicobacter pylori (strain J99 / ATCC 700824)
P43008 1.44e-08 56 40 1 82 3 exbB Biopolymer transport protein ExbB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O51808 7.05e-07 51 43 1 69 3 exbB Biopolymer transport protein ExbB Haemophilus ducreyi (strain 35000HP / ATCC 700724)
O25897 8.44e-06 48 42 0 68 3 exbB Biopolymer transport protein ExbB Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZJP6 9.12e-06 48 42 0 68 3 exbB Biopolymer transport protein ExbB Helicobacter pylori (strain J99 / ATCC 700824)
P72202 1.29e-05 47 38 1 72 3 exbB Biopolymer transport protein ExbB Mannheimia haemolytica

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_09440
Feature type CDS
Gene exbB
Product tonB-system energizer ExbB
Location 114313 - 115221 (strand: -1)
Length 909 (nucleotides) / 302 (amino acids)

Contig

Accession ZDB_218
Length 215957 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1122
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF01618 MotA/TolQ/ExbB proton channel family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0811 Intracellular trafficking, secretion, and vesicular transport (U) U Biopolymer transport protein ExbB/TolQ

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03561 biopolymer transport protein ExbB - -

Protein Sequence

MRNLTVSVLLALCLTGSAFADNTAAVTPATTTPVTAPAATAGQPAQTPEQPAAPVSATEVPVQEISAAPADGNRGFAAELSVISMYQGADVIVKSVMIGLIIASVITWSIFFAKGADLIASRRRIRREAAAIKDARSLDEAAAIADKFGKKSVTRMLVLDAVNERTASEKSRDLSGIKDRVTFRQERIVAGVARHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGLVAAIPAVVIYNIFARMISAYRGDLGDTAAHTILWLGRDLDLADSKAG

Flanking regions ( +/- flanking 50bp)

ATTTTTTGCTGAGAAAGAGTTCATAACAAAAGAGAGTTGAAGGCCAACTGATGCGTAATTTGACCGTTTCTGTGCTATTGGCATTATGTTTAACCGGCAGTGCATTCGCAGATAACACTGCAGCTGTCACACCAGCGACAACAACACCTGTCACCGCGCCGGCAGCAACCGCCGGTCAGCCTGCTCAGACGCCTGAACAACCGGCGGCCCCGGTATCCGCGACAGAGGTTCCTGTTCAGGAAATCAGCGCAGCACCGGCAGACGGTAACCGTGGCTTTGCGGCGGAATTGTCCGTGATTTCCATGTATCAGGGCGCGGATGTTATCGTTAAGTCGGTTATGATCGGCCTTATTATAGCCTCAGTGATTACCTGGTCCATTTTCTTTGCCAAGGGTGCGGATCTTATCGCTTCCCGCCGCCGTATCCGCCGTGAAGCGGCAGCAATCAAAGATGCCCGCTCGCTGGATGAAGCGGCTGCGATTGCCGATAAATTCGGGAAAAAGAGCGTCACCCGGATGTTGGTGCTTGATGCCGTCAATGAGCGGACTGCATCAGAAAAAAGCCGTGATCTGAGCGGCATCAAAGACCGTGTGACATTCCGTCAGGAGCGTATCGTTGCCGGTGTTGCCCGTCATATGGGACGTGGTAACGGCTATCTGGCCACTATCGGGGCAATCTCACCGTTTGTCGGTCTGTTTGGTACCGTATGGGGTATCATGAACAGCTTTATCGGTATCGCTCACTCACAGACCACCAACCTCGCGGTTGTGGCGCCCGGGATTGCAGAAGCACTGCTGGCAACGGCACTGGGTCTGGTCGCGGCAATTCCTGCGGTCGTTATCTACAACATCTTTGCCCGTATGATCTCCGCTTACCGTGGTGACCTGGGTGATACCGCAGCACACACTATTTTATGGCTGGGCCGTGATCTCGACCTGGCAGACAGCAAAGCAGGGTAATATCTGATGGCAATGCGTCTTAACGAAGAGTCGGATGACAGCGGCGAATT