Homologs in group_1201

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06520 FBDBKF_06520 100.0 Morganella morganii S1 thrC threonine synthase
EHELCC_09565 EHELCC_09565 100.0 Morganella morganii S2 thrC threonine synthase
NLDBIP_09945 NLDBIP_09945 100.0 Morganella morganii S4 thrC threonine synthase
HKOGLL_07360 HKOGLL_07360 100.0 Morganella morganii S5 thrC threonine synthase
F4V73_RS15410 F4V73_RS15410 93.0 Morganella psychrotolerans thrC threonine synthase
PMI_RS00015 PMI_RS00015 77.4 Proteus mirabilis HI4320 thrC threonine synthase

Distribution of the homologs in the orthogroup group_1201

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1201

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P27735 0.0 676 76 0 425 3 thrC Threonine synthase Serratia marcescens
P00934 0.0 651 76 0 426 1 thrC Threonine synthase Escherichia coli (strain K12)
P44503 0.0 605 68 1 427 3 thrC Threonine synthase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57289 0.0 558 61 2 428 3 thrC Threonine synthase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AR5 0.0 555 60 2 428 3 thrC Threonine synthase Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q8K9V1 0.0 555 59 2 428 3 thrC Threonine synthase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P16120 3.26e-71 236 34 15 495 1 THR4 Threonine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P29363 5.54e-70 231 33 11 462 3 thrC Threonine synthase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q00063 2.43e-66 223 34 12 445 3 THR4 Threonine synthase Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
Q42598 1.91e-62 213 33 14 486 1 thrc Threonine synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P37145 2.65e-59 204 31 10 476 3 thrC Threonine synthase Methylobacillus glycogenes
P23669 6.15e-54 189 29 12 475 1 thrC Threonine synthase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q2YDP8 2.45e-48 174 30 14 429 2 thnsl2 Threonine synthase-like 2 Danio rerio
Q8BH55 3.64e-43 164 30 16 445 1 Thnsl1 Threonine synthase-like 1 Mus musculus
Q5R5P3 2.03e-42 162 29 14 433 2 THNSL1 Threonine synthase-like 1 Pongo abelii
Q9BH05 2.18e-42 162 29 14 433 2 THNSL1 Threonine synthase-like 1 Macaca fascicularis
Q8IYQ7 4.34e-42 161 29 14 433 1 THNSL1 Threonine synthase-like 1 Homo sapiens
Q5XH07 2.3e-41 155 30 6 315 2 thnsl2 Threonine synthase-like 2 Xenopus laevis
Q5M7T9 2.35e-40 153 31 15 433 2 Thnsl2 Threonine synthase-like 2 Rattus norvegicus
Q5RFE6 2.59e-40 153 30 13 432 2 THNSL2 Threonine synthase-like 2 Pongo abelii
Q80W22 5.45e-40 152 30 13 431 1 Thnsl2 Threonine synthase-like 2 Mus musculus
Q86YJ6 6.94e-39 149 29 13 432 1 THNSL2 Threonine synthase-like 2 Homo sapiens
Q9ZMX5 3.29e-36 142 27 12 414 3 thrC Threonine synthase Helicobacter pylori (strain J99 / ATCC 700824)
O24924 2.24e-34 137 26 12 417 3 thrC Threonine synthase Helicobacter pylori (strain ATCC 700392 / 26695)
Q9MT28 7.49e-11 67 26 16 304 2 None Threonine synthase, chloroplastic Solanum tuberosum
Q9S7B5 1.35e-10 66 25 17 343 1 TS1 Threonine synthase 1, chloroplastic Arabidopsis thaliana
Q9SSP5 1.85e-09 63 26 15 305 1 TS2 Threonine synthase 2, chloroplastic Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_07810
Feature type CDS
Gene thrC
Product threonine synthase
Location 71948 - 73240 (strand: 1)
Length 1293 (nucleotides) / 430 (amino acids)
In genomic island -

Contig

Accession ZDB_364
Length 217237 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1201
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00291 Pyridoxal-phosphate dependent enzyme
PF14821 Threonine synthase N terminus

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0498 Amino acid transport and metabolism (E) E Threonine synthase

Kegg Ortholog Annotation(s)

Protein Sequence

MELYNLKDESEKVSFAQAVKQGLGRGQGLFFPREIPFFEQAEMDKLLAMDFVSRSTAILHALIGDEIPEAELAARVRAAFAFPAPLNPVEPDVACLELFHGPTLAFKDFGGRFMAQALAAVAGDKPVTILTATSGDTGAAVAHAFYGLKNVQVVILYPQGKISPLQEKLFCTLGGNIHTVAVQDDFDACQALVKQAFDDEELKQTLHLNSANSINISRLLAQICYYFEAVAQVPAEKRGELVFSVPSGNFGDLTAGVLAKAMGLPVKRFIAATNANDTVPRYLKDGQWKPAATVATLSNAMDVSQPNNWPRIEALFAREGWSLKDLRSGAVSDDETRETMRDLAAKGYISEPHAAIAYRLLRSDLQPGEYGIFLGTAHPAKFLESVEAILGSKLPLPAELAERADLPLLSAVLPADFAALRDYLLKTVKP

Flanking regions ( +/- flanking 50bp)

GCCGTCTCGATCTCAAAGGCGCACGTCAGATAAGTGCATAAAGGTAAAAAATGGAACTGTACAATTTAAAAGATGAGAGTGAAAAAGTCAGTTTTGCACAGGCGGTAAAACAGGGGCTGGGACGCGGACAGGGGCTGTTCTTCCCGCGTGAGATTCCGTTTTTTGAGCAGGCGGAAATGGATAAGCTGCTGGCGATGGATTTTGTCAGCCGCAGCACCGCCATTCTGCATGCCCTGATTGGTGATGAGATCCCGGAAGCTGAGCTGGCAGCGCGTGTCCGTGCCGCCTTCGCCTTCCCGGCACCGCTGAACCCGGTGGAGCCGGATGTGGCCTGTCTGGAGTTGTTTCACGGCCCGACCCTGGCATTCAAAGATTTCGGCGGACGTTTTATGGCACAGGCGCTGGCCGCGGTTGCCGGTGACAAACCCGTCACTATTCTGACCGCGACTTCCGGGGATACCGGTGCTGCCGTCGCACACGCCTTTTACGGCCTGAAAAATGTGCAGGTGGTGATCCTCTATCCGCAGGGAAAAATCAGTCCGTTACAGGAAAAACTGTTCTGTACCCTCGGCGGCAATATTCATACCGTAGCGGTGCAGGATGATTTCGATGCCTGTCAGGCACTGGTAAAACAGGCATTTGATGATGAGGAACTGAAGCAGACGCTGCATCTGAACTCGGCAAACTCTATTAATATCAGCCGTCTGCTGGCACAAATCTGTTATTACTTTGAAGCGGTGGCACAGGTTCCGGCGGAAAAACGCGGTGAACTGGTGTTCTCGGTGCCGAGTGGTAACTTCGGTGACCTGACCGCCGGGGTGCTGGCGAAAGCGATGGGTCTGCCGGTGAAACGCTTTATCGCCGCGACCAATGCCAACGACACGGTGCCGCGCTATCTGAAGGACGGACAGTGGAAACCGGCGGCAACGGTGGCAACGTTATCCAATGCCATGGATGTCAGCCAGCCGAACAACTGGCCGCGTATTGAGGCGCTGTTTGCGCGCGAAGGCTGGTCTCTGAAGGATCTGCGTTCCGGTGCGGTAAGTGATGACGAAACCCGCGAAACCATGCGCGATCTGGCCGCGAAAGGCTATATTTCCGAGCCGCATGCCGCGATTGCCTATCGTTTGCTGCGCAGTGATTTGCAGCCGGGCGAGTACGGTATTTTCCTCGGCACAGCGCATCCGGCAAAATTCCTGGAGAGTGTGGAAGCGATTCTGGGCAGTAAACTGCCGTTACCGGCAGAGCTGGCGGAGCGGGCTGATTTGCCGCTGCTGTCTGCCGTGTTACCGGCGGATTTTGCGGCGCTGCGGGACTATCTGCTGAAGACAGTGAAGCCGTAACTTCTTATCAATCATTGATAATGTGATGATAACGGGTAAGAGAACAAAAA