Homologs in group_3711

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2 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_19175 EHELCC_19175 100.0 Morganella morganii S2 - Helix-turn-helix transcriptional regulator
LHKJJB_19035 LHKJJB_19035 100.0 Morganella morganii S3 - Helix-turn-helix transcriptional regulator

Distribution of the homologs in the orthogroup group_3711

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3711

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q06553 1.97e-38 136 38 6 236 2 prtR HTH-type transcriptional regulator PrtR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q47587 4.46e-28 109 33 9 246 4 rdgA HTH-type transcriptional regulator RdgA Pectobacterium carotovorum subsp. carotovorum
Q37906 2.09e-19 86 31 7 228 4 CI Repressor protein CI Pseudomonas phage D3
P14819 3.69e-19 85 30 7 237 1 CI Repressor protein CI Enterobacteria phage phi80
P16117 7.77e-15 70 50 0 72 1 CI Repressor protein CI (Fragment) Enterobacteria phage 434
P44207 3.93e-11 63 27 5 209 1 HI_1476 Uncharacterized HTH-type transcriptional regulator HI_1476 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P03036 1.43e-10 58 44 0 68 1 CRO Regulatory protein cro Enterobacteria phage 434
Q79S39 1.43e-06 50 40 0 62 4 s087 HTH-type transcriptional regulator for conjugative element SXT Vibrio cholerae
Q8GJK1 1.43e-06 50 40 0 62 4 None HTH-type transcriptional regulator for conjugative element pMERPH Shewanella putrefaciens
Q79RI9 1.43e-06 50 40 0 62 4 ORF-96 HTH-type transcriptional regulator for conjugative element R391 Providencia rettgeri
O31943 2.09e-05 45 31 2 85 4 yonR SPbeta prophage-derived uncharacterized HTH-type transcriptional regulator YonR Bacillus subtilis (strain 168)
Q6F9U5 0.000441 42 31 3 94 4 cpiR Competence pilus inhibition repressor Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P18680 0.000874 42 25 5 190 4 CI-HTT 26 kDa repressor protein Escherichia phage HK022

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_19145
Feature type CDS
Gene -
Product Helix-turn-helix transcriptional regulator
Location 13424 - 14107 (strand: 1)
Length 684 (nucleotides) / 227 (amino acids)
In genomic island GI87

Contig

Accession ZDB_545
Length 23384 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3711
Orthogroup size 3
N. genomes 3

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Genomic region

Domains

PF00717 Peptidase S24-like
PF01381 Helix-turn-helix

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2932 Mobilome: prophages, transposons (X) X Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains

Protein Sequence

MSIAKRLAEARIKAGLSQQELADIVGVSQQSIGKIEAGKTSSPRKIADMARALNVSVHWLQFGAQDENAKIVDLAIKDWDDVPDDPYEFVSIPILDIDLSAGCGANAEIIETEIGTYPFRREELNRYGVNAENARLVKIIGNSLYPVLNSGDMVAVDITNKRIKDGDLYAIRDGVLLRVKILVGLPDGGLIVRSFNSEEYPDEVLNYDHTRARIHVIGRVFWSSRRW

Flanking regions ( +/- flanking 50bp)

GGTTAAAACAAAAAGTTGTAATCTTAAAGGAGGTAAATAAGGGAGTTGTGATGAGCATTGCAAAACGACTCGCAGAAGCGAGGATTAAAGCAGGGTTAAGCCAGCAAGAATTGGCCGACATAGTTGGTGTATCGCAGCAATCTATCGGAAAGATTGAGGCGGGAAAAACTTCGTCACCAAGAAAAATAGCTGATATGGCCAGAGCGTTGAATGTATCCGTACACTGGTTACAATTTGGTGCTCAGGATGAAAACGCTAAAATTGTAGATCTGGCAATTAAAGATTGGGATGATGTTCCTGATGACCCATATGAATTTGTGAGTATTCCTATTTTGGATATAGATTTATCCGCCGGCTGCGGCGCCAATGCTGAAATTATAGAAACAGAGATAGGAACATACCCATTCCGCAGAGAAGAGCTAAATCGTTACGGAGTTAACGCTGAGAATGCTCGCCTAGTAAAAATAATAGGTAACAGCCTCTACCCAGTATTAAACAGCGGGGATATGGTTGCAGTTGATATCACAAATAAAAGGATAAAAGACGGCGACCTCTATGCCATCAGAGATGGGGTATTGCTTCGTGTTAAAATATTGGTTGGTTTGCCAGATGGCGGACTCATTGTCCGTAGCTTTAATTCAGAAGAATACCCTGATGAAGTGCTTAATTATGACCACACCAGGGCAAGAATACACGTTATAGGTAGGGTTTTTTGGTCATCAAGACGCTGGTAGTACGGTCATCAACTGATCTTCGGTGATAATTTTTATATCTGATATTCCGC