Homologs in group_3048

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18210 FBDBKF_18210 100.0 Morganella morganii S1 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
EHELCC_18245 EHELCC_18245 100.0 Morganella morganii S2 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
LHKJJB_18365 LHKJJB_18365 100.0 Morganella morganii S3 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
HKOGLL_18100 HKOGLL_18100 100.0 Morganella morganii S5 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
PMI_RS15425 PMI_RS15425 69.7 Proteus mirabilis HI4320 - nitrilase family protein

Distribution of the homologs in the orthogroup group_3048

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3048

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9UYV8 1.06e-20 93 27 7 281 1 PYRAB13990 Nitrilase Pyrococcus abyssi (strain GE5 / Orsay)
Q75SP7 3.12e-17 83 28 12 283 1 ramA (R)-stereoselective amidase Pseudomonas sp.
Q8VYF5 6.33e-16 80 24 11 318 1 CPA N-carbamoylputrescine amidase Arabidopsis thaliana
O31664 1.63e-15 78 27 10 280 1 mtnU 2-oxoglutaramate amidase Bacillus subtilis (strain 168)
Q6INI7 1.53e-14 76 27 13 295 2 nit2b Omega-amidase NIT2-B Xenopus laevis
Q28IE5 3.27e-14 75 25 11 295 2 nit2 Omega-amidase NIT2 Xenopus tropicalis
Q6IR61 2.84e-13 72 26 13 295 2 nit2a Omega-amidase NIT2-A Xenopus laevis
Q2T9R6 4.59e-13 72 25 15 320 2 NIT2 Omega-amidase NIT2 Bos taurus
Q9XGI9 4.64e-13 72 24 11 320 2 CPA N-carbamoylputrescine amidase Solanum lycopersicum
Q3HVN1 4.96e-13 72 24 11 320 2 CPA N-carbamoylputrescine amidase Solanum tuberosum
P55176 6.3e-13 71 27 10 314 3 None Hydrolase in pqqF 5'region Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)
Q9JHW2 9.94e-13 70 24 12 320 1 Nit2 Omega-amidase NIT2 Mus musculus
Q497B0 4.22e-12 68 24 14 327 1 Nit2 Omega-amidase NIT2 Rattus norvegicus
Q9NQR4 5.06e-12 68 25 10 300 1 NIT2 Omega-amidase NIT2 Homo sapiens
Q5NHL7 8.63e-12 68 24 13 313 1 ctu Citrullinase Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
Q10166 9.78e-12 68 25 13 316 3 SPAC26A3.11 Hydrolase C26A3.11 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q93XI4 1.07e-11 68 25 11 324 2 CPA N-carbamoylputrescine amidase Oryza sativa subsp. japonica
O67091 2.86e-10 65 25 11 274 3 nadE Glutamine-dependent NAD(+) synthetase Aquifex aeolicus (strain VF5)
G9AIU0 4.49e-10 63 23 10 326 1 nit Aliphatic nitrilase Rhizobium fredii (strain HH103)
O59829 5.46e-10 62 22 11 306 3 SPCC965.09 Probable nitrilase C965.09 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P60327 4.14e-09 60 22 9 272 1 None N-carbamoyl-D-amino acid hydrolase Agrobacterium sp. (strain KNK712)
Q44185 5.71e-09 60 22 9 287 1 None N-carbamoyl-D-amino acid hydrolase Rhizobium radiobacter
Q5S260 1.29e-07 55 22 9 272 1 None N-carbamoyl-D-amino acid hydrolase Ensifer adhaerens
P46010 3.81e-07 54 25 13 307 1 NIT3 Nitrilase 3 Arabidopsis thaliana
Q9PC24 9.39e-06 50 26 10 281 3 nadE Glutamine-dependent NAD(+) synthetase Xylella fastidiosa (strain 9a5c)
Q87D47 1.05e-05 50 26 10 281 3 nadE Glutamine-dependent NAD(+) synthetase Xylella fastidiosa (strain Temecula1 / ATCC 700964)
P9WJ01 0.000157 46 29 6 129 1 Rv0480c Hydrolase Rv0480c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WJ00 0.000157 46 29 6 129 3 MT0498 Hydrolase MT0498 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
G9N4E3 0.000348 45 27 7 161 1 TRIVIDRAFT_77162 Arylacetonitrilase Hypocrea virens (strain Gv29-8 / FGSC 10586)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_18170
Feature type CDS
Gene nit2
Product Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
Location 8166 - 9182 (strand: 1)
Length 1017 (nucleotides) / 338 (amino acids)

Contig

Accession ZDB_540
Length 35191 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3048
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00795 Carbon-nitrogen hydrolase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0388 Energy production and conversion (C) C Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate

Protein Sequence

MMPVNTPSALRVATVQFQHRPGDKEYNLACIDKFIERARTEQVQILVLPEMCITGYWHVTKLPDEDVRALSEPLADSPSLRHLCARARETGMIIGAGLIEDGGDGHCYNTYVACMPDGTYHAHRKLHAFEHPVIRSGNQYTVFDTPWGVKAAILICWDNNLVENPRACALMGADIILAPHQTGGTCSRSPYGMKPVPLTLWKERDKHPEALRAAFQGVHGRGWLMRWLPARAHDNGVFYLFSNGVGQDDDEVRTGNAMVIDPYGRVVAESQAIEDDMVVADLDLTLLPLSTGRRWITGRRPELYQILTQRQGYERDARTVRFAEYAVAVAPAEPRPKG

Flanking regions ( +/- flanking 50bp)

TCTGTGCTGTGGTGTGATAGGGGCAGAGAGTCCATTCTGATGAGGAAATGATGATGCCTGTTAACACACCTTCCGCACTGCGGGTCGCCACTGTGCAGTTTCAGCACCGCCCCGGCGACAAAGAATACAATCTTGCCTGTATTGATAAGTTTATTGAGCGCGCCCGCACGGAGCAGGTGCAGATTCTTGTGCTGCCGGAAATGTGCATCACCGGCTACTGGCATGTGACAAAACTGCCGGATGAGGATGTCCGCGCACTCAGCGAGCCGCTGGCGGACAGCCCGTCACTGCGGCATCTCTGCGCCCGCGCCCGGGAAACCGGTATGATTATCGGGGCGGGGCTGATAGAAGACGGCGGTGACGGCCATTGCTATAACACCTATGTGGCCTGTATGCCGGATGGCACTTATCATGCGCACCGCAAACTGCATGCCTTTGAGCATCCGGTTATCCGCAGCGGTAATCAATACACCGTATTTGATACACCGTGGGGTGTGAAAGCGGCCATTCTTATCTGCTGGGACAACAACCTGGTGGAAAATCCGCGTGCCTGCGCACTGATGGGGGCTGATATCATTCTGGCTCCGCACCAGACCGGCGGCACCTGTTCACGCAGTCCGTACGGAATGAAACCGGTTCCGCTGACACTGTGGAAAGAACGGGATAAACATCCGGAAGCGTTACGTGCGGCTTTTCAGGGAGTGCACGGACGCGGCTGGCTGATGCGCTGGCTGCCTGCAAGGGCGCATGATAACGGGGTATTTTATCTGTTCAGTAACGGCGTGGGACAGGATGATGATGAAGTCCGCACCGGTAATGCCATGGTGATTGATCCTTACGGGCGGGTTGTGGCGGAAAGTCAGGCGATTGAGGATGACATGGTGGTGGCTGATCTCGACCTGACATTACTGCCGTTGTCCACCGGGCGGCGCTGGATAACCGGCCGCCGTCCGGAGCTGTATCAGATCCTGACACAGCGTCAGGGTTATGAACGGGATGCGCGGACAGTCCGGTTTGCGGAATACGCTGTGGCGGTCGCTCCGGCGGAACCCCGGCCGAAAGGATGATTGCCCGGTAATGCCGGTCAGGTTATGCTCATGACCGGCATCTCAGACAG