Homologs in group_3003

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17600 FBDBKF_17600 100.0 Morganella morganii S1 metC Cystathionine beta-lyase/cystathionine gamma-synthase
EHELCC_18085 EHELCC_18085 100.0 Morganella morganii S2 metC Cystathionine beta-lyase/cystathionine gamma-synthase
LHKJJB_18260 LHKJJB_18260 100.0 Morganella morganii S3 metC Cystathionine beta-lyase/cystathionine gamma-synthase
HKOGLL_17940 HKOGLL_17940 100.0 Morganella morganii S5 metC Cystathionine beta-lyase/cystathionine gamma-synthase
F4V73_RS14980 F4V73_RS14980 88.5 Morganella psychrotolerans - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme

Distribution of the homologs in the orthogroup group_3003

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3003

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O05394 8.08e-86 268 41 4 339 1 mccB Cystathionine gamma-lyase Bacillus subtilis (strain 168)
A2RM21 4.88e-79 251 39 4 340 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris (strain MG1363)
P0A4K2 4.88e-79 251 39 4 340 3 metC Cystathionine beta-lyase Lactococcus lactis subsp. lactis (strain IL1403)
P0C2T9 3.15e-76 243 38 4 340 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris
P13254 1.34e-75 243 37 2 337 1 mdeA L-methionine gamma-lyase Pseudomonas putida
Q8RDT4 2.64e-75 241 36 3 341 1 FN1419 L-methionine gamma-lyase Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
Q8L0X4 7.82e-75 240 35 3 341 1 mgl L-methionine gamma-lyase Fusobacterium nucleatum subsp. polymorphum
P56069 9.6e-74 237 39 4 338 1 metB Cystathionine gamma-synthase Helicobacter pylori (strain ATCC 700392 / 26695)
Q1M0P5 1.19e-73 237 38 4 338 1 metB Cystathionine gamma-synthase Helicobacter pylori
A0A0J6G7P5 1.51e-72 234 36 5 368 3 megL L-methionine gamma-lyase Pseudomonas deceptionensis
Q73KL7 2.02e-72 234 34 3 342 1 megL L-methionine gamma-lyase Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104)
Q7MX71 1.24e-71 232 36 3 341 1 mgl L-methionine gamma-lyase Porphyromonas gingivalis (strain ATCC BAA-308 / W83)
Q9ZMW7 2.35e-70 228 35 6 387 3 metB Cystathionine gamma-synthase Helicobacter pylori (strain J99 / ATCC 700824)
Q83A83 1.44e-69 226 34 6 364 1 metC Cystathionine beta-lyase Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
O31632 1.65e-69 226 36 4 340 1 metC Cystathionine beta-lyase MetC Bacillus subtilis (strain 168)
P0DXC4 2.02e-69 226 37 5 341 1 JFQ02_10020 Canavanine gamma-lyase Pseudomonas canavaninivorans
P0DXD3 1.21e-67 222 37 5 345 1 Rleg2_5066 Canavanine gamma-lyase Rhizobium leguminosarum bv. trifolii (strain WSM2304)
P46807 3.91e-66 218 35 3 341 3 metB Cystathionine gamma-synthase Mycobacterium leprae (strain TN)
P9WGB7 7.5e-66 217 35 3 341 1 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB6 7.5e-66 217 35 3 341 3 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66876 7.5e-66 217 35 3 341 3 metB Cystathionine gamma-synthase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q60HG7 1.05e-65 217 34 5 340 2 CTH Cystathionine gamma-lyase Macaca fascicularis
Q8VCN5 3.04e-65 216 34 5 351 1 Cth Cystathionine gamma-lyase Mus musculus
Q19QT7 4.11e-65 216 33 4 339 2 CTH Cystathionine gamma-lyase Sus scrofa
P55217 1.39e-64 218 36 2 339 1 CGS1 Cystathionine gamma-synthase 1, chloroplastic Arabidopsis thaliana
O31631 2.39e-64 213 34 6 362 1 metI Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase Bacillus subtilis (strain 168)
P24601 8.79e-64 209 36 3 278 3 metB Probable cystathionine gamma-synthase (Fragment) Herpetosiphon aurantiacus
P55218 1.7e-63 211 35 1 335 1 metZ O-succinylhomoserine sulfhydrylase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9C876 3.15e-63 211 34 4 364 3 CGS2 Probable cystathionine gamma-synthase 2 Arabidopsis thaliana
Q55DV9 4.06e-63 210 33 3 342 1 cysA Cystathionine gamma-lyase Dictyostelium discoideum
Q4L332 4.71e-63 210 35 6 350 1 metC Cystathionine beta-lyase MetC Staphylococcus haemolyticus (strain JCSC1435)
A0A0M3VI47 5.24e-62 209 35 5 349 1 CBL Cystathionine beta-lyase, chloroplastic Mimosa pudica
P18757 1.88e-61 206 32 4 339 1 Cth Cystathionine gamma-lyase Rattus norvegicus
Q58DW2 6.32e-61 204 33 4 324 2 CTH Cystathionine gamma-lyase Bos taurus
P55216 6.78e-61 204 34 5 343 3 cth-2 Putative cystathionine gamma-lyase 2 Caenorhabditis elegans
P53780 1.99e-60 205 33 4 344 1 At3g57050 Cystathionine beta-lyase, chloroplastic Arabidopsis thaliana
Q5SK88 2.97e-60 203 31 9 424 1 oah1 O-acetyl-L-homoserine sulfhydrylase 1 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Q9WZY4 1.31e-59 202 31 7 397 1 TM_0882 O-acetyl-L-homoserine sulfhydrylase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P32929 1.58e-59 201 34 5 340 1 CTH Cystathionine gamma-lyase Homo sapiens
P31373 3.73e-59 200 34 6 346 1 CYS3 Cystathionine gamma-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A8CEI3 1.7e-57 197 32 6 363 1 None Mimosinase, chloroplastic Leucaena leucocephala
P44502 1.86e-57 194 34 7 363 3 metB Cystathionine gamma-synthase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P94890 8.1e-57 195 28 7 430 1 metY O-acetyl-L-homoserine sulfhydrylase Leptospira meyeri
U6BYK3 9.17e-56 192 32 5 343 1 None Mimosinase, chloroplastic Mimosa pudica
O13326 5.64e-54 187 30 4 401 1 met17 Homocysteine synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P00935 1.06e-53 185 33 2 342 1 metB Cystathionine gamma-synthase Escherichia coli (strain K12)
P9WGB5 9.26e-53 183 32 5 374 1 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB4 9.26e-53 183 32 5 374 3 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q79VI4 4.68e-52 182 30 3 368 1 metY O-acetyl-L-homoserine sulfhydrylase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q1K8G0 1.54e-51 181 34 8 351 1 met-2 Cystathionine beta-lyase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Q5SJ58 4.76e-51 179 31 9 394 1 oah2 O-acetyl-L-homoserine sulfhydrylase 2 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
S0DUX5 1.13e-50 179 28 7 408 1 FUB7 Sulfhydrylase FUB7 Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831)
Q52811 1.45e-50 177 32 4 350 3 metC Putative cystathionine beta-lyase Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
W7MS09 4.06e-50 177 28 7 408 1 FUB7 Sulfhydrylase FUB7 Gibberella moniliformis (strain M3125 / FGSC 7600)
A0A0D2YG02 4.15e-50 177 28 7 408 1 FUB7 Sulfhydrylase FUB7 Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936)
P50125 1.14e-48 173 29 7 401 1 cysD Homocysteine synthase Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Q59829 2.04e-48 171 34 10 355 3 cysA Putative cystathionine gamma-lyase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q9X0Z7 9.51e-48 169 31 7 347 1 aar L-alanine/L-glutamate racemase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q92441 9.07e-45 163 28 8 432 3 MET17 Homocysteine/cysteine synthase Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Q826W3 2.56e-43 159 34 7 341 1 mgl L-methionine gamma-lyase Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
P06106 4.4e-43 159 27 9 430 1 MET17 Homocysteine/cysteine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q07703 9.25e-43 157 29 6 357 1 metC Cystathionine beta-lyase Bordetella avium
O94350 4.26e-42 155 30 5 342 3 str3 Cystathionine beta-lyase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P06721 1.01e-40 151 28 4 340 1 metC Cystathionine beta-lyase MetC Escherichia coli (strain K12)
Q5MNH8 5.01e-39 148 26 3 365 2 lolC2 Sulfhydrylase-like protein lolC2 Epichloe uncinata
P18949 1.01e-38 146 28 4 340 3 metC Cystathionine beta-lyase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9SGU9 1.06e-37 144 30 9 336 1 MGL Methionine gamma-lyase Arabidopsis thaliana
P44527 6.78e-37 141 27 5 359 3 metC Cystathionine beta-lyase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8J0B2 1.73e-36 141 25 6 417 2 lolC1 Sulfhydrylase-like protein lolC1 Epichloe uncinata
Q73GL9 2.14e-35 137 25 10 402 1 aar L-alanine/L-glutamate racemase Wolbachia pipientis wMel
P43623 2.24e-29 119 29 3 245 1 IRC7 Putative cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P38716 1.54e-28 118 29 12 351 1 YHR112C Uncharacterized trans-sulfuration enzyme YHR112C Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P53101 5.39e-24 106 28 13 367 1 STR3 Cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O42851 1.05e-21 99 29 17 391 1 SPAC23A1.14c Uncharacterized trans-sulfuration enzyme C23A1.14c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
A0A397HQN2 7.16e-11 67 25 8 317 1 ankD Cystathionine gamma-synthase-like protein ankD Aspergillus thermomutatus
P38675 4.53e-09 62 27 5 247 3 met-7 Cystathionine gamma-synthase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
A0A0C2WKN7 6.65e-09 61 23 13 369 2 iboG1 Cystathionine gamma-synthase-like enzyme iboG1 Amanita muscaria (strain Koide BX008)
G8XHD7 9.87e-08 57 27 10 254 1 besB L-2-amino-4-chloropent-4-enoate dechlorinase/desaturase Streptantibioticus cattleyicolor (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
A0A2V5GUR2 1.92e-07 56 26 9 267 1 ungC Alanine racemase ungC Aspergillus violaceofuscus (strain CBS 115571)
O74314 3.45e-07 55 27 9 257 3 SPBC15D4.09c Probable cystathionine gamma-synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q12198 2.16e-06 53 24 14 371 1 HSU1 Homocysteine/cysteine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q04533 4.77e-06 52 25 8 254 1 YML082W Putative cystathionine gamma-synthase YML082W Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A0A2I1D2M7 1.06e-05 51 37 1 70 3 ungC' Alanine racemase ungC' Aspergillus campestris (strain IBT 28561)
P47164 1.57e-05 50 27 11 252 1 STR2 Cystathionine gamma-synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A0A0C2S258 0.000166 47 23 8 284 2 iboG2 Cystathionine gamma-synthase-like enzyme iboG2 Amanita muscaria (strain Koide BX008)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_18065
Feature type CDS
Gene metC
Product Cystathionine beta-lyase/cystathionine gamma-synthase
Location 22532 - 23704 (strand: -1)
Length 1173 (nucleotides) / 390 (amino acids)

Contig

Accession ZDB_539
Length 38736 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3003
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF01053 Cys/Met metabolism PLP-dependent enzyme

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0626 Amino acid transport and metabolism (E) E Cystathionine beta-lyase/cystathionine gamma-synthase

Protein Sequence

MKERTQLLYSGEMNLPGHIHPDAPAIFPATAYAMQDTQHYFAVSSGNGEYQYNRTANPNRDSLSAAISLMEDGEVSAVMASGMAAISATLLSLLRQGDHLVVNEAIYGETIELIDLILVPLGVTVTYADFLSPESVQAAIRPETVMLYTEIISNPLIKVVDIDAIAGISRANGCLLVVDNTFSTPFVIKPLQHGADIVIHSLTKFFGGHSDLTAGSVTCSQVLMQKIELKARLLGGCSDPYTAWLCLRSIRTMEMRVSRQMENAQRIAEALSGDPRVAQVNYPGLASHPQHDLAKSLFLQGCGPMLSFRVADDQTKVDAFIRRLNLITYLGTLGGFRTSLAHPATAFRTEFTPQQLIDFGMHEGLIRISAGCEAAEDLIADITQALDVFN

Flanking regions ( +/- flanking 50bp)

GGTTTAGGGTGTGCGCATTGTTATTTATTGTTAAAAAAGCAGGATAAAAAATGAAAGAACGCACACAGCTATTGTATTCAGGGGAAATGAATTTACCGGGTCATATTCATCCGGATGCGCCCGCTATTTTTCCGGCTACCGCCTATGCCATGCAGGATACGCAGCACTATTTTGCTGTCAGCAGCGGCAATGGTGAGTATCAGTATAACCGTACCGCAAATCCTAACCGGGACAGCTTATCTGCCGCGATCTCACTGATGGAAGACGGCGAAGTCTCTGCAGTTATGGCTTCCGGGATGGCAGCAATCTCAGCGACATTGCTTAGCCTGCTCAGACAGGGTGACCATCTTGTCGTGAATGAGGCTATTTACGGCGAAACCATTGAACTGATTGATTTAATTCTGGTTCCGCTGGGGGTAACAGTAACCTATGCGGATTTTCTGTCACCGGAGTCGGTACAGGCCGCCATCCGGCCGGAAACGGTGATGCTGTATACTGAAATTATCAGTAACCCGCTGATTAAAGTGGTCGATATCGATGCCATTGCCGGTATCAGCCGGGCAAATGGTTGCCTGCTGGTGGTGGATAATACCTTTTCAACCCCGTTTGTCATCAAGCCCTTACAGCACGGCGCGGATATCGTGATCCACAGCCTGACCAAATTTTTTGGCGGCCACAGTGATTTAACCGCCGGCTCGGTAACCTGCTCACAGGTACTGATGCAGAAAATTGAGCTGAAAGCCCGTCTGTTGGGGGGATGCAGTGATCCTTATACGGCCTGGCTCTGTCTGCGCAGCATCCGGACAATGGAAATGCGGGTATCGCGCCAGATGGAAAATGCACAGCGTATTGCGGAAGCACTCAGCGGTGACCCGCGTGTGGCACAGGTGAATTATCCGGGCCTGGCGTCACATCCTCAGCATGATTTAGCGAAATCTCTGTTTCTGCAGGGCTGCGGCCCGATGCTCAGTTTCCGTGTCGCTGATGACCAGACAAAAGTCGATGCTTTTATCCGCCGTTTAAATCTTATTACCTATCTGGGCACGCTGGGCGGGTTCCGCACCTCTCTGGCGCATCCGGCAACCGCATTCCGCACTGAATTTACACCGCAGCAACTGATTGATTTCGGTATGCATGAGGGGCTTATCCGTATTTCTGCCGGATGCGAAGCTGCCGAAGATTTAATTGCTGATATTACTCAGGCACTTGATGTGTTTAATTAAACCGGATACTCACTATGGACACGATTCTTAATATTATTAATCAGTTTTCA