Homologs in group_2122

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15940 FBDBKF_15940 100.0 Morganella morganii S1 amtB ammonium transporter AmtB
EHELCC_18540 EHELCC_18540 100.0 Morganella morganii S2 amtB ammonium transporter AmtB
LHKJJB_17285 LHKJJB_17285 100.0 Morganella morganii S3 amtB ammonium transporter AmtB
HKOGLL_17110 HKOGLL_17110 100.0 Morganella morganii S5 amtB ammonium transporter AmtB
F4V73_RS16370 F4V73_RS16370 84.3 Morganella psychrotolerans amtB ammonium transporter AmtB
PMI_RS00615 PMI_RS00615 65.3 Proteus mirabilis HI4320 amtB ammonium transporter AmtB

Distribution of the homologs in the orthogroup group_2122

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2122

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P69681 0.0 547 64 0 414 1 amtB Ammonium transporter AmtB Escherichia coli (strain K12)
P69680 0.0 547 64 0 414 1 amtB Ammonium transporter AmtB Escherichia coli O157:H7
Q07429 2.72e-109 330 47 5 407 1 nrgA Ammonium transporter Bacillus subtilis (strain 168)
O26759 1.99e-105 321 46 5 407 3 MTH_663 Putative ammonium transporter MTH_663 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
O66515 1.57e-104 319 45 6 411 1 amt Ammonium transporter Aquifex aeolicus (strain VF5)
O28525 5.92e-96 296 43 7 402 3 amt3 Ammonium transporter Amt3 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
O26757 3.53e-90 281 43 9 415 3 MTH_661 Putative ammonium transporter MTH_661 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
O29285 1.26e-86 272 39 7 403 1 amt1 Ammonium transporter Amt1 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q9BLG4 6.22e-72 236 37 8 411 1 amtA Ammonium transporter 1 Dictyostelium discoideum
P9WQ65 9.93e-71 233 40 9 434 3 amt Ammonium transporter Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQ64 9.93e-71 233 40 9 434 3 amt Ammonium transporter Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P63520 9.93e-71 233 40 9 434 3 amt Ammonium transporter Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9C0V1 1.14e-68 229 35 8 413 3 amt1 Ammonium transporter 1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P53390 6.34e-68 226 35 8 417 1 MEP3 Ammonium transporter MEP3 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P54146 4.46e-65 218 33 9 418 2 amt Ammonium transporter Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q9US00 3.73e-64 217 35 11 424 3 amt2 Ammonium transporter 2 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P41948 4.71e-64 217 37 11 423 1 MEP2 Ammonium transporter MEP2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
G7L1W7 7.88e-62 210 33 9 440 2 AMT2-4 Ammonium transporter 2 member 4 Medicago truncatula
P40260 2.76e-61 209 32 8 417 1 MEP1 Ammonium transporter MEP1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A0A072VHJ1 1.07e-59 205 33 6 431 2 AMT2-5 Ammonium transporter 2 member 5 Medicago truncatula
Q8S230 2.32e-59 204 29 8 460 2 AMT2-2 Ammonium transporter 2 member 2 Oryza sativa subsp. japonica
G7LAA8 2.46e-58 201 32 9 433 2 AMT2-3 Ammonium transporter 2 member 3 Medicago truncatula
P54147 5.91e-58 201 35 11 405 3 sll0108 Putative ammonium transporter sll0108 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9M6N7 2.17e-57 198 31 9 431 1 AMT2 Ammonium transporter 2 Arabidopsis thaliana
Q84KJ6 1.96e-56 196 30 7 457 2 AMT3-1 Ammonium transporter 3 member 1 Oryza sativa subsp. japonica
Q8S233 1.13e-55 194 30 9 455 2 AMT2-3 Ammonium transporter 2 member 3 Oryza sativa subsp. japonica
Q84KJ7 8.28e-54 189 30 8 442 2 AMT2-1 Ammonium transporter 2 member 1 Oryza sativa subsp. japonica
Q69T29 8.82e-54 189 30 5 437 2 AMT3-3 Ammonium transporter 3 member 3 Oryza sativa subsp. japonica
Q851M9 1.21e-51 183 31 5 437 2 AMT3-2 Ammonium transporter 3 member 2 Oryza sativa subsp. japonica
Q9P7F3 5.62e-49 177 31 12 461 3 amt3 Ammonium transporter 3 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O28528 4.55e-43 160 31 8 413 3 amt2 Ammonium transporter Amt2 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
P72935 6.8e-40 151 32 10 407 3 sll1017 Putative ammonium transporter sll1017 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P54144 1.78e-38 148 28 11 435 1 AMT1-1 Ammonium transporter 1 member 1 Arabidopsis thaliana
Q9ZPJ8 9.78e-38 146 28 14 440 1 AMT1-2 Ammonium transporter 1 member 2 Arabidopsis thaliana
B8ZYW3 3.04e-37 144 30 10 414 2 amt2 Ammonium transporter Amt2 Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)
Q7XQ12 4e-37 144 30 15 444 2 AMT1-1 Ammonium transporter 1 member 1 Oryza sativa subsp. japonica
Q9LK16 1.06e-36 143 28 13 441 3 AMT1-5 Putative ammonium transporter 1 member 5 Arabidopsis thaliana
Q6K9G1 1.39e-36 143 29 17 440 2 AMT1-2 Ammonium transporter 1 member 2 Oryza sativa subsp. japonica
Q9FVN0 1.76e-36 142 28 13 442 2 AMT1-3 Ammonium transporter 1 member 3 Solanum lycopersicum
I3R0S7 2.84e-36 142 32 12 424 1 amt1 Ammonium transporter Amt1 Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)
Q9SQH9 3.91e-36 142 28 11 435 1 AMT1-3 Ammonium transporter 1 member 3 Arabidopsis thaliana
Q9BLG3 4.66e-36 140 29 13 430 1 amtB Ammonium transporter 2 Dictyostelium discoideum
Q9SVT8 6.99e-35 138 28 13 447 1 AMT1-4 Ammonium transporter 1 member 4 Arabidopsis thaliana
O04161 9.23e-35 138 28 14 440 2 AMT1-2 Ammonium transporter 1 member 2 Solanum lycopersicum
Q60366 9.85e-34 133 30 14 414 1 amt1 Ammonium transporter Amt1 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58739 1.49e-32 130 30 13 422 1 amt2 Ammonium transporter Amt2 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P58905 1.83e-32 131 29 18 441 2 AMT1-1 Ammonium transporter 1 member 1 Solanum lycopersicum
P54145 1.85e-31 129 28 13 432 3 amt-1 Putative ammonium transporter 1 Caenorhabditis elegans
Q6K9G3 3.3e-31 128 28 16 452 2 AMT1-3 Ammonium transporter 1 member 3 Oryza sativa subsp. japonica
P54148 7.56e-29 122 28 10 419 3 sll0537 Putative ammonium transporter sll0537 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q8MXY0 3.17e-28 119 29 11 418 2 amtC Ammonium transporter 3 Dictyostelium discoideum
Q21565 1.08e-18 92 24 11 414 3 amt-3 Putative ammonium transporter 3 Caenorhabditis elegans
Q20605 4.05e-13 74 24 17 438 3 amt-2 Putative ammonium transporter 2 Caenorhabditis elegans
Q95JD3 4.15e-07 55 28 5 187 2 RHCG Ammonium transporter Rh type C Oryctolagus cuniculus
Q19KI0 1.54e-06 53 28 6 187 2 RHCG Ammonium transporter Rh type C Sus scrofa
Q3BCQ5 1.57e-06 53 26 9 254 2 RHAG Ammonium transporter Rh type A Canis lupus familiaris
Q5U4V1 1.79e-06 53 27 7 203 2 rhcg Ammonium transporter Rh type C Xenopus laevis
Q3BCQ4 4.11e-06 52 29 7 186 2 RHCG Ammonium transporter Rh type C Canis lupus familiaris
Q7TNN9 4.29e-06 52 28 5 171 1 Rhcg Ammonium transporter Rh type C Rattus norvegicus
Q4VUZ1 5.51e-06 52 27 9 197 2 rhcg Ammonium transporter Rh type C Oncorhynchus mykiss
Q95M75 5.98e-06 52 29 7 201 2 RHBG Ammonium transporter Rh type B Sus scrofa
Q10CV4 9.14e-06 50 28 3 154 3 AMT4-1 Putative ammonium transporter 4 member 1 Oryza sativa subsp. japonica
Q19KH7 9.19e-06 51 28 7 197 2 rhcg Ammonium transporter Rh type C Gasterosteus aculeatus
Q9QXP0 1.79e-05 50 28 5 171 1 Rhcg Ammonium transporter Rh type C Mus musculus
Q9NIV0 1.91e-05 50 26 10 268 1 rhgA Rhesus-like glycoprotein A Dictyostelium discoideum
Q8JI14 2.72e-05 50 24 9 260 2 rhcgl2 Ammonium transporter Rh type C-like 2 Danio rerio
Q9GKN7 3.54e-05 49 25 8 237 2 RHAG Ammonium transporter Rh type A Bos taurus
Q7T3R4 3.86e-05 49 28 7 197 1 rhcg2 Ammonium transporter Rh type C 2 Takifugu rubripes
Q4VUI0 4.59e-05 49 27 10 234 2 RHBG Ammonium transporter Rh type B Canis lupus familiaris
Q6WRY0 6.59e-05 48 26 6 202 2 rhcg Ammonium transporter Rh type C Xenopus tropicalis
Q02094 0.000147 47 28 10 236 1 RHAG Ammonium transporter Rh type A Homo sapiens
Q3BBX8 0.00015 47 28 7 194 2 rhbg Ammonium transporter Rh type B Tetraodon nigroviridis
Q18PF6 0.000161 47 26 12 278 1 rhbg Ammonium transporter Rh type B Takifugu rubripes
Q8WMW2 0.000185 47 29 8 201 3 RHBG Ammonium transporter Rh type B Gorilla gorilla gorilla
Q9H310 0.00024 47 26 13 333 1 RHBG Ammonium transporter Rh type B Homo sapiens
Q2T9S6 0.000327 46 28 5 169 2 RHCG Ammonium transporter Rh type C Bos taurus
Q95M74 0.000379 46 28 7 201 2 RHBG Ammonium transporter Rh type B Pan troglodytes
Q7T070 0.000393 46 28 11 216 2 rhbg Ammonium transporter Rh type B Danio rerio
Q6XL41 0.000393 46 27 8 187 2 RHCG Ammonium transporter Rh type C Gallus gallus
Q8WNQ5 0.000425 46 25 13 333 3 RHBG Ammonium transporter Rh type B Papio hamadryas
Q8WNQ6 0.000451 46 25 13 333 3 RHBG Ammonium transporter Rh type B Macaca mulatta
Q18PF5 0.000752 45 26 8 197 2 rhcg1 Ammonium transporter Rh type C 1 Takifugu rubripes
Q95JD4 0.000797 45 28 9 209 2 RHBG Ammonium transporter Rh type B Oryctolagus cuniculus

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_17375
Feature type CDS
Gene amtB
Product ammonium transporter AmtB
Location 26701 - 27990 (strand: 1)
Length 1290 (nucleotides) / 429 (amino acids)

Contig

Accession ZDB_536
Length 56187 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2122
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00909 Ammonium Transporter Family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0004 Inorganic ion transport and metabolism (P) P Ammonia channel protein AmtB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03320 ammonium transporter, Amt family - -

Protein Sequence

MMKRKMVLPVVMSAVLPLPAFSATEGMERADNGFMLICAALVYFMTLPGIALFYGGLVRRENVLSVMTQVIVSFALVLLLWVFYGYSMAFSDGNGVIGGLSHAFLSGITPVSNSGSISQLTHVIFQGSFAAITVALITGALAERIKFTAFLLFTVIWFSLAYVPMAHMVWGGGWLAEDGALDFAGGTVVHINAAVAGLVGAYILGPRLLPGKTATKPHSLPMVFTGTAILYIGWFGFNAGSAGKPDGIAALAFLNTVIAVAAGVLAWVIAEWCMRGKPSLLGACSGCIGGLVGITPAAGTVGVAGAIVIGLISGIAGYWGVTALKRRLKADDVCDVFGIHGVCGIAGCLLTGVFTASALGGTGYAEGVTMLHQVWIQAESILVTVLWSGVITYIAFKCAALTTGVRCTEEDEISGLDISTHGEQAYNRS

Flanking regions ( +/- flanking 50bp)

TACCGGTGAACAAAATGATGAAGCTATTTAAACCGCGCGGAGATGCTCAGATGATGAAACGAAAAATGGTCTTGCCTGTTGTGATGTCCGCGGTGCTGCCGCTTCCGGCATTCAGTGCAACGGAAGGAATGGAGCGTGCGGATAATGGTTTTATGCTGATTTGTGCCGCACTGGTGTATTTTATGACACTTCCCGGTATCGCGCTGTTTTACGGCGGACTGGTACGACGTGAGAATGTGTTATCAGTCATGACACAGGTGATTGTCAGCTTCGCGCTGGTGCTGCTGTTATGGGTTTTTTATGGCTACAGCATGGCATTTTCTGACGGAAATGGGGTGATTGGCGGTCTGTCTCATGCATTTCTCAGCGGGATCACGCCTGTCAGTAACAGCGGCAGTATCAGCCAGCTGACACATGTTATTTTCCAGGGCTCTTTTGCGGCAATTACTGTTGCACTTATCACCGGTGCGCTGGCAGAACGGATCAAATTCACGGCCTTTCTGTTGTTCACCGTTATCTGGTTCTCTCTGGCTTATGTACCGATGGCGCATATGGTTTGGGGCGGCGGCTGGCTGGCGGAAGATGGTGCACTGGATTTTGCCGGGGGAACCGTTGTACATATTAACGCGGCGGTTGCCGGGTTAGTTGGTGCTTACATATTGGGACCGCGCCTGTTACCGGGGAAAACCGCGACCAAACCGCACAGTCTGCCGATGGTCTTTACCGGCACGGCGATCCTTTATATCGGCTGGTTCGGGTTTAATGCCGGATCGGCCGGAAAACCGGATGGTATTGCAGCACTGGCTTTTCTGAATACCGTGATTGCGGTGGCGGCGGGCGTGCTGGCGTGGGTGATTGCAGAGTGGTGCATGCGGGGTAAGCCCTCACTTCTCGGTGCGTGTTCCGGCTGTATCGGCGGTCTGGTCGGGATCACCCCGGCGGCCGGGACGGTGGGCGTCGCGGGGGCGATAGTTATCGGCCTTATCAGCGGTATTGCCGGTTATTGGGGCGTCACTGCACTGAAGCGCCGCCTGAAAGCGGATGATGTCTGCGATGTCTTCGGGATCCACGGCGTCTGCGGTATTGCGGGCTGTCTGCTGACCGGCGTGTTTACTGCGTCCGCTCTCGGCGGTACCGGTTATGCAGAAGGTGTCACTATGCTGCATCAGGTATGGATTCAGGCGGAAAGCATCCTGGTTACTGTGCTCTGGAGCGGAGTGATTACTTACATCGCATTCAAATGCGCGGCACTGACAACCGGTGTACGCTGCACAGAAGAAGATGAGATCAGTGGGCTGGATATCAGTACGCATGGTGAACAGGCCTATAACCGCTCATAGCTGAAAAAAAGTAAGCCCCCGCTCACCGATGTACAGCGGGGGCTTTTTTA