Orthogroup:group_2159


Homologs in group_2159

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16245 FBDBKF_16245 Morganella morganii S1 rpmB 50S ribosomal protein L28
EHELCC_16280 EHELCC_16280 Morganella morganii S2 rpmB 50S ribosomal protein L28
NLDBIP_17060 NLDBIP_17060 Morganella morganii S4 rpmB 50S ribosomal protein L28
LHKJJB_16980 LHKJJB_16980 Morganella morganii S3 rpmB 50S ribosomal protein L28
HKOGLL_16860 HKOGLL_16860 Morganella morganii S5 rpmB 50S ribosomal protein L28
F4V73_RS17350 F4V73_RS17350 Morganella psychrotolerans rpmB 50S ribosomal protein L28
PMI_RS15610 PMI_RS15610 Proteus mirabilis HI4320 rpmB 50S ribosomal protein L28

Distribution of group_2159 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2159 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2159

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2159.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpmB 7

Product

# Product Occurence
1 50S ribosomal protein L28 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0227 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L28

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02902 7 large subunit ribosomal protein L28 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00830 7 Ribosomal L28 family

Annotations of the 519 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein bL28 511
Large ribosomal subunit protein bL28B 5
Large ribosomal subunit protein bL28c 3

Protein length

Unique protein length 78

Protein length distribution