Homologs in group_2115

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15895 FBDBKF_15895 100.0 Morganella morganii S1 ppiD peptidylprolyl isomerase
EHELCC_18495 EHELCC_18495 100.0 Morganella morganii S2 ppiD peptidylprolyl isomerase
LHKJJB_17330 LHKJJB_17330 100.0 Morganella morganii S3 ppiD peptidylprolyl isomerase
HKOGLL_17065 HKOGLL_17065 100.0 Morganella morganii S5 ppiD peptidylprolyl isomerase
F4V73_RS16420 F4V73_RS16420 84.1 Morganella psychrotolerans ppiD peptidylprolyl isomerase
PMI_RS00575 PMI_RS00575 43.2 Proteus mirabilis HI4320 ppiD peptidylprolyl isomerase

Distribution of the homologs in the orthogroup group_2115

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2115

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADY1 0.0 555 46 3 619 1 ppiD Periplasmic chaperone PpiD Escherichia coli (strain K12)
P0ADY2 0.0 555 46 3 619 3 ppiD Periplasmic chaperone PpiD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P44092 5.01e-103 328 32 9 622 3 ppiD Periplasmic chaperone PpiD Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q7VKX4 3.48e-93 302 33 11 629 3 ppiD Periplasmic chaperone PpiD Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q8K987 6.89e-81 270 26 4 617 3 ppiD Periplasmic chaperone PpiD Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57550 3.5e-80 268 27 8 616 3 ppiD Periplasmic chaperone PpiD Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89A98 1.06e-13 77 22 5 221 5 ppiD Putative chaperone PpiD Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q89A98 0.000415 47 20 8 223 5 ppiD Putative chaperone PpiD Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q8R760 2.17e-12 72 32 6 168 3 prsA Foldase protein PrsA Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
A4IKU2 3.7e-11 67 28 7 204 3 prsA Foldase protein PrsA Geobacillus thermodenitrificans (strain NG80-2)
C5D6L9 3.71e-11 67 31 3 129 3 prsA Foldase protein PrsA Geobacillus sp. (strain WCH70)
Q5L289 5.34e-11 67 27 6 201 3 prsA Foldase protein PrsA Geobacillus kaustophilus (strain HTA426)
Q81TU1 1.63e-10 65 34 2 109 1 prsA2 Foldase protein PrsA 2 Bacillus anthracis
A5N4J2 1.8e-10 66 34 3 138 3 prsA Foldase protein PrsA Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
B9DY54 1.8e-10 66 34 3 138 3 prsA Foldase protein PrsA Clostridium kluyveri (strain NBRC 12016)
Q8CXK4 2.17e-10 65 31 4 134 3 prsA Foldase protein PrsA Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
Q81GN0 4.08e-10 64 31 3 125 3 prsA2 Foldase protein PrsA 2 Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q1RI35 4.07e-09 61 27 2 151 3 plp Parvulin-like PPIase Rickettsia bellii (strain RML369-C)
Q68WG0 1.55e-08 60 27 3 161 3 plp Parvulin-like PPIase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q71XE6 1.6e-08 60 36 2 113 3 prsA2 Foldase protein PrsA 2 Listeria monocytogenes serotype 4b (strain F2365)
Q929F4 3.22e-08 58 35 2 113 3 prsA2 Foldase protein PrsA 2 Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
P37566 3.87e-08 58 32 2 113 3 yacD Putative peptidyl-prolyl cis-trans isomerase YacD Bacillus subtilis (strain 168)
Q0PAS1 5.12e-08 58 32 3 108 1 cbf2 Putative peptidyl-prolyl cis-trans isomerase Cbf2 Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
A1VYV6 5.51e-08 58 32 3 108 3 cbf2 Putative peptidyl-prolyl cis-trans isomerase Cbf2 Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)
Q4UKY0 5.7e-08 58 27 3 161 3 plp Parvulin-like PPIase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q8Y557 8.65e-08 57 35 2 113 3 prsA2 Foldase protein PrsA 2 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q92H91 1.14e-07 57 27 3 162 3 plp Parvulin-like PPIase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
C3KW94 1.73e-07 57 21 10 375 3 prsA Foldase protein PrsA Clostridium botulinum (strain 657 / Type Ba4)
Q837Y9 1.75e-07 57 44 2 75 3 prsA Foldase protein PrsA Enterococcus faecalis (strain ATCC 700802 / V583)
B1YK87 3.03e-07 56 31 3 111 3 prsA Foldase protein PrsA Exiguobacterium sibiricum (strain DSM 17290 / CCUG 55495 / CIP 109462 / JCM 13490 / 255-15)
A7GJD2 8.78e-07 55 21 10 375 3 prsA Foldase protein PrsA Clostridium botulinum (strain Langeland / NCTC 10281 / Type F)
Q9ZCX6 1.67e-06 53 26 3 161 3 plp Parvulin-like PPIase Rickettsia prowazekii (strain Madrid E)
C1FNE4 2.21e-06 53 21 10 375 3 prsA Foldase protein PrsA Clostridium botulinum (strain Kyoto / Type A2)
B1IGZ5 3.05e-06 53 21 10 375 3 prsA Foldase protein PrsA Clostridium botulinum (strain Okra / Type B1)
A5I7R3 3.45e-06 53 21 10 375 3 prsA Foldase protein PrsA Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)
A7FPK5 3.45e-06 53 21 10 375 3 prsA Foldase protein PrsA Clostridium botulinum (strain ATCC 19397 / Type A)
B1KTE0 4.65e-06 52 21 11 374 3 prsA Foldase protein PrsA Clostridium botulinum (strain Loch Maree / Type A3)
Q9KDN4 9.46e-06 51 31 3 116 3 prsA Foldase protein PrsA Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q81CB1 1.07e-05 51 30 4 125 1 prsA4 Foldase protein PrsA 4 Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q81QT1 1.38e-05 50 32 4 125 1 prsA3 Foldase protein PrsA 3 Bacillus anthracis
P24327 1.45e-05 50 32 3 113 1 prsA Foldase protein PrsA Bacillus subtilis (strain 168)
Q3K5T4 5.3e-05 49 32 1 75 3 surA Chaperone SurA Pseudomonas fluorescens (strain Pf0-1)
Q92BR2 5.91e-05 48 29 6 169 3 prsA1 Foldase protein PrsA 1 Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Q88A44 7.03e-05 49 34 1 76 3 surA Chaperone SurA Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Q0VMV4 7.36e-05 49 32 4 107 3 surA Chaperone SurA Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2)
Q71ZM6 7.46e-05 48 29 6 169 3 prsA1 Foldase protein PrsA 1 Listeria monocytogenes serotype 4b (strain F2365)
Q02473 0.000145 47 29 7 171 3 prsA Foldase protein PrsA Lacticaseibacillus paracasei
Q81U45 0.000153 47 29 4 129 1 prsA1 Foldase protein PrsA 1 Bacillus anthracis
Q8Y759 0.000154 47 29 6 169 1 prsA1 Foldase protein PrsA 1 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q0SQ68 0.000318 47 27 6 170 3 prsA Foldase protein PrsA Clostridium perfringens (strain SM101 / Type A)
Q145L3 0.000383 47 24 15 333 3 surA Chaperone SurA Paraburkholderia xenovorans (strain LB400)
Q3JAF1 0.000432 47 32 2 83 3 surA Chaperone SurA Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107)
Q1GZC0 0.000463 46 27 4 138 3 surA Chaperone SurA Methylobacillus flagellatus (strain ATCC 51484 / DSM 6875 / VKM B-1610 / KT)
Q48NT5 0.000472 46 32 1 71 3 surA Chaperone SurA Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
Q1WUQ1 0.000522 46 29 4 118 3 prsA Foldase protein PrsA Ligilactobacillus salivarius (strain UCC118)
Q9I5U3 0.000533 46 32 1 77 3 surA Chaperone SurA Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q4K4X7 0.000536 46 33 1 71 3 surA Chaperone SurA Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Q88QT4 0.000602 46 42 0 52 3 surA Chaperone SurA Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q0HS08 0.000608 46 32 3 85 3 surA Chaperone SurA Shewanella sp. (strain MR-7)
Q8EB95 0.00063 46 32 3 85 3 surA Chaperone SurA Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
P56112 0.000691 45 27 4 148 1 HP_0175 Putative peptidyl-prolyl cis-trans isomerase HP_0175 Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZMQ7 0.000703 45 27 4 148 3 jhp_0161 Putative peptidyl-prolyl cis-trans isomerase jhp_0161 Helicobacter pylori (strain J99 / ATCC 700824)
Q0HLT0 0.000899 45 32 3 85 3 surA Chaperone SurA Shewanella sp. (strain MR-4)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_17330
Feature type CDS
Gene ppiD
Product peptidylprolyl isomerase
Location 17313 - 19181 (strand: 1)
Length 1869 (nucleotides) / 622 (amino acids)

Contig

Accession ZDB_536
Length 56187 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2115
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13145 PPIC-type PPIASE domain
PF13624 SurA-like N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0760 Posttranslational modification, protein turnover, chaperones (O) O Peptidyl-prolyl isomerase, parvulin family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] - -

Protein Sequence

MMENLRTAANNPVIKIVFAIIILSFILTGVGGYLVSGSNYAAKVNDTEISVQQLERAFQEERNRQQAQLGDLFSQLVSTEEGVKQIRSQALNQMIDTILLEQYARKLGITVSDDQIISAIRQEPDFQVNGQFSQQAYETFLSRNGITGDNYATYLRKQMIQAQLVQPFVRDSFVLDSEVTNAAAVLLQSRTIRTATLDLASAQAKQTTTDEELQAYYAKNKNSFIAPQSLKISFVELDAANIQDNTSVTEEQIQDYYDKNIPRFTVPAKGEYSQITLATEDDAKAVLNELKNGADFKTLAKEKSTDKLTARNGGVIGWMEDAALIPEIKGAGLTTAGQISEVLKVDNGYAIFRLDVYEPETVRPLADVKEEATRLAKGEAASKAFFDLQQKASEAAANDNESLMGVEQATGVKAVQTDWFALNSLPDAVNYPEVLKALTENKLFDEKGPSGANSDIITVSGDRAFVIRVDEYRPEAVESFEKVKSDIDALVKRSKAEAALNAEADKLLTALKEGKGDAALTEAGVKFGAEQTVQRLNPSDPVINAAFTQPHPADGKPTYSRTIDGKGNIVLVQLDKVTAGTATDQEKTELRTVLRQQMASTELESLLLNLRANADIDVRNMN

Flanking regions ( +/- flanking 50bp)

ATTTCCCCTGACCTGATTTTTCTTTTACCAAAGCGGAGTTTGGATTTCTTATGATGGAAAACCTGCGCACAGCGGCGAACAACCCTGTGATTAAAATTGTCTTCGCCATCATTATCCTGTCATTTATTCTGACAGGTGTGGGTGGTTACCTCGTCAGCGGTTCTAACTATGCTGCCAAAGTGAACGATACTGAAATATCGGTCCAGCAGTTAGAGCGCGCCTTCCAGGAAGAGCGTAACCGCCAGCAGGCTCAGCTGGGTGATCTGTTCTCGCAGTTAGTCAGCACCGAAGAGGGCGTTAAACAAATCCGTTCTCAGGCGCTGAACCAGATGATTGACACCATTCTGCTGGAACAGTATGCACGGAAATTAGGTATCACTGTCAGTGATGACCAGATTATCAGCGCGATTCGTCAGGAGCCTGATTTTCAGGTTAACGGTCAGTTCAGCCAGCAGGCGTATGAGACATTCCTGTCCCGTAACGGTATCACCGGTGACAACTACGCAACTTATCTGCGCAAGCAGATGATTCAGGCACAGCTGGTTCAGCCGTTTGTGCGTGACTCATTTGTGCTTGATTCCGAAGTGACCAATGCCGCAGCTGTTTTACTCCAGTCACGTACCATCCGTACCGCGACACTGGATCTGGCTTCTGCTCAGGCAAAACAGACCACAACCGATGAAGAGCTGCAGGCTTATTACGCGAAGAATAAAAACAGCTTCATTGCGCCGCAGTCCTTAAAAATCAGTTTTGTTGAGCTGGATGCCGCGAATATCCAGGACAACACATCAGTCACTGAAGAACAGATTCAGGACTACTACGACAAAAATATCCCGCGTTTTACTGTGCCGGCAAAAGGCGAGTACAGTCAGATCACCCTGGCGACGGAAGATGATGCCAAAGCGGTACTGAATGAACTGAAAAACGGGGCGGATTTCAAAACCCTGGCTAAAGAAAAATCCACCGATAAACTGACTGCCCGTAACGGCGGCGTGATCGGCTGGATGGAAGATGCTGCGCTGATCCCTGAAATTAAAGGTGCCGGGCTGACAACCGCCGGTCAGATTTCAGAGGTTCTGAAAGTGGATAACGGCTACGCGATTTTCCGTCTGGATGTGTACGAGCCGGAAACCGTCAGACCGCTGGCGGATGTGAAAGAAGAAGCCACCCGTCTGGCCAAAGGCGAAGCGGCAAGCAAAGCCTTCTTTGACCTCCAGCAGAAAGCCAGTGAAGCTGCTGCGAACGATAACGAATCCCTGATGGGTGTTGAGCAGGCAACCGGCGTTAAAGCTGTACAGACTGACTGGTTTGCCCTGAACAGTCTGCCGGATGCGGTTAACTATCCGGAAGTGTTAAAAGCATTAACGGAAAACAAACTGTTTGATGAGAAAGGACCTTCCGGTGCTAACTCTGACATCATCACCGTTTCCGGTGACCGTGCCTTTGTGATCCGTGTTGATGAATATCGTCCGGAAGCAGTGGAATCCTTTGAAAAAGTGAAGTCAGACATTGACGCGCTGGTGAAGCGCAGCAAAGCGGAAGCCGCGCTGAATGCGGAAGCGGATAAACTGCTGACGGCACTGAAAGAAGGTAAAGGCGACGCCGCGTTAACAGAAGCCGGTGTGAAATTCGGGGCAGAGCAGACTGTTCAGCGCCTGAATCCGTCAGACCCGGTTATCAATGCTGCCTTTACCCAGCCGCATCCTGCGGACGGTAAACCGACCTACAGCCGCACCATTGACGGCAAGGGTAACATTGTTCTGGTACAGCTGGATAAAGTGACAGCCGGTACGGCAACGGATCAGGAAAAAACTGAGCTGCGTACAGTGCTGCGTCAGCAAATGGCGTCCACTGAGCTGGAATCATTACTGCTGAACCTGCGTGCTAACGCAGATATTGATGTGAGAAATATGAACTAAAATTTTTCGATCTGTACCGAAAAATAAAATGTCGTTTTACATCATCTGAA