Homologs in group_2115

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15895 FBDBKF_15895 43.2 Morganella morganii S1 ppiD peptidylprolyl isomerase
EHELCC_18495 EHELCC_18495 43.2 Morganella morganii S2 ppiD peptidylprolyl isomerase
NLDBIP_17330 NLDBIP_17330 43.2 Morganella morganii S4 ppiD peptidylprolyl isomerase
LHKJJB_17330 LHKJJB_17330 43.2 Morganella morganii S3 ppiD peptidylprolyl isomerase
HKOGLL_17065 HKOGLL_17065 43.2 Morganella morganii S5 ppiD peptidylprolyl isomerase
F4V73_RS16420 F4V73_RS16420 41.6 Morganella psychrotolerans ppiD peptidylprolyl isomerase

Distribution of the homologs in the orthogroup group_2115

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2115

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADY1 3.34e-169 499 41 2 621 1 ppiD Periplasmic chaperone PpiD Escherichia coli (strain K12)
P0ADY2 3.34e-169 499 41 2 621 3 ppiD Periplasmic chaperone PpiD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P44092 3.35e-96 310 33 12 629 3 ppiD Periplasmic chaperone PpiD Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q7VKX4 1.57e-87 288 30 12 632 3 ppiD Periplasmic chaperone PpiD Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q8K987 4e-82 273 28 5 618 3 ppiD Periplasmic chaperone PpiD Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57550 1.38e-73 251 25 5 611 3 ppiD Periplasmic chaperone PpiD Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8R760 2.62e-15 80 34 4 146 3 prsA Foldase protein PrsA Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Q81GN0 5.23e-15 79 33 4 160 3 prsA2 Foldase protein PrsA 2 Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q81GY5 4.91e-14 76 32 4 184 3 prsA1 Foldase protein PrsA 1 Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
A4IKU2 1.92e-13 74 31 4 165 3 prsA Foldase protein PrsA Geobacillus thermodenitrificans (strain NG80-2)
Q81TU1 2.2e-13 74 32 4 160 1 prsA2 Foldase protein PrsA 2 Bacillus anthracis
Q929F4 1.96e-12 71 33 5 180 3 prsA2 Foldase protein PrsA 2 Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Q5L289 3.86e-12 70 32 4 153 3 prsA Foldase protein PrsA Geobacillus kaustophilus (strain HTA426)
C5D6L9 5.6e-12 70 31 3 139 3 prsA Foldase protein PrsA Geobacillus sp. (strain WCH70)
Q81QT1 7.98e-12 69 34 3 124 1 prsA3 Foldase protein PrsA 3 Bacillus anthracis
Q71XE6 1.98e-11 68 38 3 125 3 prsA2 Foldase protein PrsA 2 Listeria monocytogenes serotype 4b (strain F2365)
Q89A98 2.01e-11 70 22 0 209 5 ppiD Putative chaperone PpiD Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q89A98 8.89e-05 49 19 10 303 5 ppiD Putative chaperone PpiD Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q81DT1 2.49e-11 68 34 3 124 3 prsA3 Foldase protein PrsA 3 Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
A7GJD2 4.22e-11 68 23 10 371 3 prsA Foldase protein PrsA Clostridium botulinum (strain Langeland / NCTC 10281 / Type F)
P24327 5.29e-11 67 32 7 168 1 prsA Foldase protein PrsA Bacillus subtilis (strain 168)
A5N4J2 8.79e-11 67 24 11 378 3 prsA Foldase protein PrsA Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
B9DY54 8.79e-11 67 24 11 378 3 prsA Foldase protein PrsA Clostridium kluyveri (strain NBRC 12016)
Q8Y557 1.01e-10 66 37 3 125 3 prsA2 Foldase protein PrsA 2 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q8CXK4 2.8e-10 65 27 5 153 3 prsA Foldase protein PrsA Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
B1IGZ5 3.5e-10 65 24 12 374 3 prsA Foldase protein PrsA Clostridium botulinum (strain Okra / Type B1)
C1FNE4 3.56e-10 65 23 10 371 3 prsA Foldase protein PrsA Clostridium botulinum (strain Kyoto / Type A2)
Q81U45 9.3e-10 63 30 5 185 1 prsA1 Foldase protein PrsA 1 Bacillus anthracis
A5I7R3 1.63e-09 63 23 12 374 3 prsA Foldase protein PrsA Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)
A7FPK5 1.63e-09 63 23 12 374 3 prsA Foldase protein PrsA Clostridium botulinum (strain ATCC 19397 / Type A)
Q81CB1 2.88e-09 62 29 3 144 1 prsA4 Foldase protein PrsA 4 Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q9KDN4 4.16e-09 62 31 2 119 3 prsA Foldase protein PrsA Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P37566 9.8e-09 60 29 3 129 3 yacD Putative peptidyl-prolyl cis-trans isomerase YacD Bacillus subtilis (strain 168)
B1YK87 1.79e-08 60 32 5 153 3 prsA Foldase protein PrsA Exiguobacterium sibiricum (strain DSM 17290 / CCUG 55495 / CIP 109462 / JCM 13490 / 255-15)
C3KW94 6.65e-08 58 23 13 371 3 prsA Foldase protein PrsA Clostridium botulinum (strain 657 / Type Ba4)
A1VYV6 9.68e-08 57 31 3 138 3 cbf2 Putative peptidyl-prolyl cis-trans isomerase Cbf2 Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)
Q0PAS1 9.95e-08 57 31 3 138 1 cbf2 Putative peptidyl-prolyl cis-trans isomerase Cbf2 Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
B1KTE0 2.08e-07 57 23 13 374 3 prsA Foldase protein PrsA Clostridium botulinum (strain Loch Maree / Type A3)
Q1RI35 3.19e-07 55 32 5 133 3 plp Parvulin-like PPIase Rickettsia bellii (strain RML369-C)
Q899I2 2.34e-06 53 30 6 178 3 prsA Foldase protein PrsA Clostridium tetani (strain Massachusetts / E88)
Q1QZ33 3.54e-06 53 30 2 122 3 surA Chaperone SurA Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11)
Q9ZCX6 3.43e-05 49 27 8 192 3 plp Parvulin-like PPIase Rickettsia prowazekii (strain Madrid E)
Q68WG0 3.82e-05 49 27 8 192 3 plp Parvulin-like PPIase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q8Y759 4.12e-05 49 33 2 113 1 prsA1 Foldase protein PrsA 1 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q7WCX5 4.76e-05 48 23 9 273 3 BB3803 Probable parvulin-type peptidyl-prolyl cis-trans isomerase Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q97E99 6.01e-05 49 28 3 137 3 prsA Foldase protein PrsA Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q71ZM6 8.74e-05 48 32 2 113 3 prsA1 Foldase protein PrsA 1 Listeria monocytogenes serotype 4b (strain F2365)
Q1BTQ6 0.000108 48 39 2 63 3 surA Chaperone SurA Burkholderia orbicola (strain AU 1054)
Q39D35 0.000111 48 39 2 63 3 surA Chaperone SurA Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383)
Q92BR2 0.000143 47 32 2 113 3 prsA1 Foldase protein PrsA 1 Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
P40415 0.000149 47 23 9 273 2 BP3561 Probable parvulin-type peptidyl-prolyl cis-trans isomerase Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Q7W5E0 0.000149 47 23 9 273 3 BPP3352 Probable parvulin-type peptidyl-prolyl cis-trans isomerase Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
P60749 0.00016 47 34 3 120 3 prsA Foldase protein PrsA Staphylococcus aureus (strain MW2)
A8YY10 0.00016 47 34 3 120 3 prsA Foldase protein PrsA Staphylococcus aureus (strain USA300 / TCH1516)
Q6G894 0.00016 47 34 3 120 3 prsA Foldase protein PrsA Staphylococcus aureus (strain MSSA476)
P60748 0.00016 47 34 3 120 1 prsA Foldase protein PrsA Staphylococcus aureus (strain N315)
P60747 0.00016 47 34 3 120 1 prsA Foldase protein PrsA Staphylococcus aureus (strain Mu50 / ATCC 700699)
A6QI23 0.00016 47 34 3 120 3 prsA Foldase protein PrsA Staphylococcus aureus (strain Newman)
Q5HET4 0.00016 47 34 3 120 3 prsA Foldase protein PrsA Staphylococcus aureus (strain COL)
Q2G2S6 0.00016 47 34 3 120 3 prsA Foldase protein PrsA Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FFQ5 0.00016 47 34 3 120 3 prsA Foldase protein PrsA Staphylococcus aureus (strain USA300)
A6U2U4 0.00016 47 34 3 120 3 prsA Foldase protein PrsA Staphylococcus aureus (strain JH1)
A7X3U8 0.00016 47 34 3 120 3 prsA Foldase protein PrsA Staphylococcus aureus (strain Mu3 / ATCC 700698)
Q4UKY0 0.000162 47 29 4 122 3 plp Parvulin-like PPIase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q88QT4 0.000175 48 26 5 146 3 surA Chaperone SurA Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q62MM4 0.000177 48 37 2 66 3 surA Chaperone SurA Burkholderia mallei (strain ATCC 23344)
Q92H91 0.000179 47 29 4 122 3 plp Parvulin-like PPIase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q3JVW8 0.000193 48 37 2 66 3 surA Chaperone SurA Burkholderia pseudomallei (strain 1710b)
Q63X78 0.000195 48 37 2 66 3 surA Chaperone SurA Burkholderia pseudomallei (strain K96243)
Q15QB3 0.000204 47 35 2 87 3 surA Chaperone SurA Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)
Q2YTZ6 0.000305 47 34 3 120 3 prsA Foldase protein PrsA Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q6GFL5 0.000328 47 34 3 120 3 prsA Foldase protein PrsA Staphylococcus aureus (strain MRSA252)
Q8CNR4 0.000398 46 37 1 66 3 prsA Foldase protein PrsA Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HN96 0.00042 46 37 1 66 3 prsA Foldase protein PrsA Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q21MS8 0.00043 47 34 1 78 3 surA Chaperone SurA Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)
Q82W17 0.000664 46 37 3 70 3 surA Chaperone SurA Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)
Q2T116 0.000675 46 36 2 66 3 surA Chaperone SurA Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00575
Feature type CDS
Gene ppiD
Product peptidylprolyl isomerase
Location 148619 - 150496 (strand: 1)
Length 1878 (nucleotides) / 625 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2115
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13145 PPIC-type PPIASE domain
PF13624 SurA-like N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0760 Posttranslational modification, protein turnover, chaperones (O) O Peptidyl-prolyl isomerase, parvulin family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] - -

Protein Sequence

MMDNIRSTANNPFIKILLAVIILSFVLTGVGGYLFSSGVNDAAEVNGYKISRAQLEQAYQQRRAQLQKDMGDNFASLASSDEGQKMIRQQALNVLINQALLDQFAQELGISAGDQQIRDAIFALPYFQTDGKFDNKKYVELLTANNIDADAFAEGIRQNLINQQLRYSIQGTDFALESEVKDFAGLMLQSRNVRLASLDIQPFLEKETVSDEELKAFYDQNTSMFIAPAQVKVSYIQLEAQKDLSNITISDDEVKAYYDSNISEFTVPGQKKYSLLVLADETAAKEAEDALKNGADFVTLVKEKSIDTFSAKQDGSLGWITIGQELPELANASLTEKGQISQPVKISNGYAIFRLDDIKPSVVKPFDDIKADLLVKMRENKAIDDFFALQQKVSQAASNDNDTLATAAKAGNVTVINTDWFDENNVPAALNNEKLTQLIFGGSLVDDNGPTGMNSDMVTLGNDSAYIVRVEGYKPASTQPLDKVRDKVITLVKQQKASQAMNAQAQKLLAALKEGKGEAALKEANISFGEVESVVHSSATDPIQSAIFAMPKPAEGKKEYGMSNVPGSKVVLIQLDSVTDGKPTAEQLEFMTNLYRAQMGEEALQLMLSDLREKAKIEIFDKDYQ

Flanking regions ( +/- flanking 50bp)

GTAACACCAATAAAAAATAATTTTTTCACCAAACGGAGCCTAGTCTCGTTATGATGGACAACATTCGTTCAACTGCTAATAATCCTTTTATTAAGATACTATTAGCTGTGATCATCCTCTCTTTCGTCCTAACTGGTGTGGGCGGATATCTCTTTAGTTCTGGTGTTAATGATGCCGCTGAAGTTAACGGTTATAAAATAAGTCGTGCTCAGTTAGAGCAAGCTTATCAACAACGCCGAGCACAACTACAAAAAGATATGGGTGACAATTTTGCTTCCCTCGCATCATCAGATGAGGGACAAAAAATGATCCGCCAACAAGCATTGAATGTGCTGATTAACCAAGCTTTGCTGGATCAATTTGCTCAAGAGTTAGGTATTTCTGCTGGCGACCAGCAAATCAGAGACGCGATTTTTGCGCTACCTTATTTCCAAACTGATGGTAAATTTGATAACAAAAAATACGTTGAGTTATTAACGGCGAATAATATTGACGCGGATGCCTTTGCTGAAGGAATTCGTCAAAATCTGATTAATCAACAATTACGTTATTCTATTCAAGGCACTGACTTTGCTTTAGAGAGCGAAGTTAAAGACTTTGCCGGCTTAATGCTACAAAGCCGTAATGTGCGTCTCGCTTCATTAGATATTCAGCCATTCCTTGAAAAAGAGACGGTATCAGATGAAGAATTAAAAGCCTTTTATGACCAAAATACCTCTATGTTTATCGCTCCAGCACAAGTTAAAGTGAGCTATATTCAGTTAGAAGCCCAAAAAGATTTAAGCAACATCACTATTTCAGATGATGAAGTTAAAGCTTATTACGATAGTAATATCAGTGAATTTACTGTTCCCGGACAAAAAAAATACAGTCTACTTGTCTTAGCAGATGAAACCGCTGCGAAAGAAGCTGAAGATGCGTTGAAAAATGGCGCTGACTTCGTCACCTTAGTAAAAGAAAAATCCATTGATACTTTTTCTGCTAAACAAGATGGTTCATTAGGCTGGATCACTATTGGTCAAGAGCTACCAGAATTAGCAAATGCGAGTTTGACTGAGAAGGGGCAAATTTCACAGCCAGTTAAAATCAGCAACGGTTATGCTATTTTCCGTCTTGATGATATTAAACCTTCGGTGGTAAAACCTTTTGATGACATTAAAGCTGACTTATTAGTAAAAATGCGTGAAAACAAAGCCATTGATGATTTCTTCGCATTGCAGCAAAAAGTGAGTCAAGCCGCTTCAAATGATAACGACACGCTAGCGACAGCAGCAAAAGCAGGGAACGTCACTGTAATCAATACAGATTGGTTTGATGAAAACAATGTACCAGCAGCCTTGAATAACGAAAAGTTAACACAGCTTATCTTTGGTGGTTCACTGGTTGATGACAATGGCCCTACAGGCATGAACTCAGATATGGTTACCCTTGGTAATGATAGTGCTTATATTGTTCGTGTCGAAGGATATAAACCTGCATCAACCCAACCATTAGATAAAGTACGTGACAAGGTTATTACACTGGTCAAACAGCAAAAAGCTTCTCAAGCGATGAATGCGCAAGCTCAGAAACTCCTTGCAGCCTTAAAAGAAGGTAAAGGAGAGGCGGCATTGAAAGAAGCAAATATCTCGTTTGGTGAGGTAGAAAGCGTGGTTCATTCATCAGCCACAGATCCGATACAAAGTGCTATTTTTGCTATGCCAAAACCAGCAGAAGGTAAAAAAGAGTACGGTATGTCTAATGTACCGGGTTCAAAAGTGGTCTTAATCCAATTAGATAGTGTCACTGATGGTAAGCCAACGGCAGAACAGCTTGAATTTATGACTAATCTCTATCGCGCCCAAATGGGAGAAGAAGCTTTACAACTTATGCTCAGCGATTTAAGAGAAAAAGCAAAAATCGAGATTTTTGATAAAGATTATCAATAAACTATCTTAGATTGATTGAATAAAAACCCAGTTTCGACTGGGTTTTTTTA