Homologs in group_2115

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15895 FBDBKF_15895 84.1 Morganella morganii S1 ppiD peptidylprolyl isomerase
EHELCC_18495 EHELCC_18495 84.1 Morganella morganii S2 ppiD peptidylprolyl isomerase
NLDBIP_17330 NLDBIP_17330 84.1 Morganella morganii S4 ppiD peptidylprolyl isomerase
LHKJJB_17330 LHKJJB_17330 84.1 Morganella morganii S3 ppiD peptidylprolyl isomerase
HKOGLL_17065 HKOGLL_17065 84.1 Morganella morganii S5 ppiD peptidylprolyl isomerase
PMI_RS00575 PMI_RS00575 41.6 Proteus mirabilis HI4320 ppiD peptidylprolyl isomerase

Distribution of the homologs in the orthogroup group_2115

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2115

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADY1 0.0 551 46 3 619 1 ppiD Periplasmic chaperone PpiD Escherichia coli (strain K12)
P0ADY2 0.0 551 46 3 619 3 ppiD Periplasmic chaperone PpiD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q7VKX4 2.31e-92 300 32 9 625 3 ppiD Periplasmic chaperone PpiD Haemophilus ducreyi (strain 35000HP / ATCC 700724)
P44092 4.38e-92 300 30 9 622 3 ppiD Periplasmic chaperone PpiD Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57550 6.43e-81 270 27 6 605 3 ppiD Periplasmic chaperone PpiD Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K987 3.02e-78 263 26 4 617 3 ppiD Periplasmic chaperone PpiD Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89A98 4.57e-14 78 22 5 221 5 ppiD Putative chaperone PpiD Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q89A98 3.68e-05 50 21 8 223 5 ppiD Putative chaperone PpiD Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q5L289 1.03e-12 72 33 5 154 3 prsA Foldase protein PrsA Geobacillus kaustophilus (strain HTA426)
C5D6L9 3.7e-12 70 34 3 135 3 prsA Foldase protein PrsA Geobacillus sp. (strain WCH70)
A4IKU2 1.29e-11 68 33 5 154 3 prsA Foldase protein PrsA Geobacillus thermodenitrificans (strain NG80-2)
Q8R760 2e-11 68 28 8 225 3 prsA Foldase protein PrsA Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Q81GN0 8.38e-11 66 29 4 159 3 prsA2 Foldase protein PrsA 2 Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q4UKY0 1.24e-10 66 31 3 161 3 plp Parvulin-like PPIase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
A5N4J2 1.25e-10 67 31 3 136 3 prsA Foldase protein PrsA Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
B9DY54 1.25e-10 67 31 3 136 3 prsA Foldase protein PrsA Clostridium kluyveri (strain NBRC 12016)
Q81TU1 1.94e-10 65 30 3 140 1 prsA2 Foldase protein PrsA 2 Bacillus anthracis
Q92H91 2.59e-10 65 31 3 162 3 plp Parvulin-like PPIase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q68WG0 4.06e-10 64 32 4 162 3 plp Parvulin-like PPIase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q1RI35 6.94e-10 63 30 3 152 3 plp Parvulin-like PPIase Rickettsia bellii (strain RML369-C)
Q9ZCX6 1.59e-08 59 30 4 162 3 plp Parvulin-like PPIase Rickettsia prowazekii (strain Madrid E)
P37566 2.9e-08 59 30 3 140 3 yacD Putative peptidyl-prolyl cis-trans isomerase YacD Bacillus subtilis (strain 168)
Q8CXK4 8.19e-08 57 28 4 128 3 prsA Foldase protein PrsA Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
Q0PAS1 1.01e-07 57 31 2 108 1 cbf2 Putative peptidyl-prolyl cis-trans isomerase Cbf2 Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
A1VYV6 1.05e-07 57 31 2 108 3 cbf2 Putative peptidyl-prolyl cis-trans isomerase Cbf2 Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)
Q71XE6 5.53e-07 55 34 2 113 3 prsA2 Foldase protein PrsA 2 Listeria monocytogenes serotype 4b (strain F2365)
Q837Y9 6.21e-07 55 44 2 75 3 prsA Foldase protein PrsA Enterococcus faecalis (strain ATCC 700802 / V583)
B1YK87 7.79e-07 55 30 2 109 3 prsA Foldase protein PrsA Exiguobacterium sibiricum (strain DSM 17290 / CCUG 55495 / CIP 109462 / JCM 13490 / 255-15)
Q9KDN4 1.02e-06 54 32 3 116 3 prsA Foldase protein PrsA Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
C3KW94 1.03e-06 54 31 3 129 3 prsA Foldase protein PrsA Clostridium botulinum (strain 657 / Type Ba4)
Q929F4 1.69e-06 53 33 2 113 3 prsA2 Foldase protein PrsA 2 Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
A7GJD2 1.73e-06 53 28 3 135 3 prsA Foldase protein PrsA Clostridium botulinum (strain Langeland / NCTC 10281 / Type F)
Q8Y557 2.52e-06 53 33 2 113 3 prsA2 Foldase protein PrsA 2 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q81CB1 3.49e-06 52 33 4 126 1 prsA4 Foldase protein PrsA 4 Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
C1FNE4 4.51e-06 52 28 3 135 3 prsA Foldase protein PrsA Clostridium botulinum (strain Kyoto / Type A2)
B1IGZ5 4.59e-06 52 28 3 135 3 prsA Foldase protein PrsA Clostridium botulinum (strain Okra / Type B1)
Q81QT1 5.26e-06 52 36 2 101 1 prsA3 Foldase protein PrsA 3 Bacillus anthracis
P24327 1.04e-05 51 34 3 113 1 prsA Foldase protein PrsA Bacillus subtilis (strain 168)
Q3K5T4 1.17e-05 52 34 1 75 3 surA Chaperone SurA Pseudomonas fluorescens (strain Pf0-1)
B1KTE0 1.45e-05 51 31 4 129 3 prsA Foldase protein PrsA Clostridium botulinum (strain Loch Maree / Type A3)
A5I7R3 1.69e-05 50 28 3 135 3 prsA Foldase protein PrsA Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)
A7FPK5 1.69e-05 50 28 3 135 3 prsA Foldase protein PrsA Clostridium botulinum (strain ATCC 19397 / Type A)
Q81DT1 2.19e-05 50 35 2 101 3 prsA3 Foldase protein PrsA 3 Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q4K4X7 2.9e-05 50 36 1 71 3 surA Chaperone SurA Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Q0HS08 0.000142 48 28 4 120 3 surA Chaperone SurA Shewanella sp. (strain MR-7)
Q8EB95 0.000151 48 28 4 120 3 surA Chaperone SurA Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q5ZYR3 0.000188 48 36 1 72 3 surA Chaperone SurA Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Q5WZN0 0.000197 47 36 1 72 3 surA Chaperone SurA Legionella pneumophila (strain Lens)
Q5X877 0.000198 47 36 1 72 3 surA Chaperone SurA Legionella pneumophila (strain Paris)
Q9I5U3 0.000199 47 33 1 77 3 surA Chaperone SurA Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q0HLT0 0.00023 47 28 4 120 3 surA Chaperone SurA Shewanella sp. (strain MR-4)
Q48NT5 0.000253 47 35 1 71 3 surA Chaperone SurA Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
Q88QT4 0.000393 47 36 2 77 3 surA Chaperone SurA Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q88A44 0.000717 46 34 1 76 3 surA Chaperone SurA Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16420
Feature type CDS
Gene ppiD
Product peptidylprolyl isomerase
Location 99887 - 101755 (strand: -1)
Length 1869 (nucleotides) / 622 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2115
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13145 PPIC-type PPIASE domain
PF13624 SurA-like N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0760 Posttranslational modification, protein turnover, chaperones (O) O Peptidyl-prolyl isomerase, parvulin family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] - -

Protein Sequence

MMENLRTAANNPVIKIIFAIIILSFILTGVGGYLVSGSNYAAKVNDTEISSQQLERAFQEERNRQQAQLGDMFSQLVSTEQGVKQIRTQALNQLIDTILLEQYAMKLGITVSDNQIINAIREEPGFAVDGQFSQQAYDTFLARNSITGESYANYLRKQMIQGQLVQPFVRDSFVLDNEVTNAAAILLQARTIRQATLTLSAAQAKQSTTDEELQAYYAKNKNNFIAPQAIKISFVELDAANIQDNTGVSEQQIQDYYDKNTARFTAPGKGEYSQITVATQDDANAILDALKSGADFSTLAKEKSTDKLTARNGGVIGWMEDAALVPEIKSANLKSAGQVSEIVKLDNGYAIFRLDVYEPETLKPLAAVKDEVTALVKGEAASKAFFDLQQKASEAAANDNESLVGVEQATGVKAVQTDWFALSKLPDAVNYPELLKALSDNLLFDEKGSSGANSDIITVSGDRAFVIRVDAYRPEAVEPFEKVRGEIEALVKRSKAEAALNAQADTLIAALKEGKGDAALAAAGVKFGEAQTIQRLNPTDPVINAAFTQAHPVDGKPTYSRTIDAQGNIVLVQLDKVIAGNATDKEKTELREVLRQQMASTELESLLINLRLNADIDVKSMD

Flanking regions ( +/- flanking 50bp)

TTTACCCTGACCTGATTTTTATTTTACCAAAAGCGGAGTTTGGATTTCTTATGATGGAAAATCTACGCACAGCGGCGAATAACCCTGTGATAAAAATTATCTTCGCCATCATTATCCTGTCATTTATTCTGACAGGTGTCGGTGGTTACCTCGTCAGCGGTTCTAATTATGCTGCCAAAGTGAATGATACTGAAATATCATCACAGCAATTAGAACGCGCCTTCCAGGAAGAGCGTAATCGCCAGCAGGCTCAGCTGGGTGACATGTTCTCGCAGTTAGTCAGTACTGAACAGGGCGTGAAACAAATTCGCACCCAGGCATTGAATCAGTTAATTGATACTATTTTGCTTGAACAGTATGCGATGAAATTAGGTATCACTGTCAGTGATAACCAAATTATTAATGCTATCCGTGAAGAACCCGGATTCGCGGTTGACGGACAGTTCAGCCAGCAGGCGTATGATACGTTCCTTGCCCGTAACAGTATAACCGGCGAAAGCTATGCGAATTATCTGCGCAAACAGATGATCCAGGGGCAACTGGTACAGCCTTTTGTCCGTGACTCTTTTGTGCTCGACAACGAAGTCACTAATGCCGCCGCTATTTTACTGCAGGCGCGTACTATCCGTCAGGCAACGCTGACGCTCTCTGCTGCTCAGGCAAAACAGAGCACCACTGACGAAGAGTTACAGGCTTACTACGCGAAAAACAAAAATAATTTTATCGCCCCTCAGGCGATAAAAATCAGCTTTGTTGAGTTGGATGCCGCAAATATCCAGGATAATACCGGGGTAAGTGAGCAGCAGATTCAGGATTATTACGATAAAAACACAGCACGCTTTACGGCGCCCGGCAAAGGTGAATACAGTCAGATTACTGTTGCAACGCAAGATGATGCCAACGCCATTCTGGATGCACTGAAAAGTGGCGCTGATTTCAGTACGCTGGCTAAAGAAAAATCAACCGATAAACTGACTGCACGTAACGGCGGTGTTATCGGCTGGATGGAAGATGCTGCATTAGTGCCTGAAATTAAATCGGCTAACCTGAAAAGTGCGGGACAGGTTTCAGAGATTGTGAAGCTGGATAATGGCTATGCTATTTTCCGTCTGGATGTGTATGAGCCGGAAACACTCAAACCACTGGCTGCGGTGAAAGATGAAGTCACTGCTCTGGTAAAAGGTGAAGCAGCAAGTAAAGCCTTCTTTGATTTACAGCAAAAAGCCAGTGAAGCGGCAGCAAATGATAATGAATCTCTGGTCGGTGTTGAGCAGGCCACAGGTGTTAAAGCTGTGCAGACAGATTGGTTCGCGCTGAGCAAACTGCCTGATGCGGTTAATTATCCGGAACTGCTGAAAGCCTTATCTGATAACCTGCTGTTTGATGAAAAAGGCTCATCCGGCGCTAACTCTGACATCATTACCGTATCCGGTGACCGTGCCTTTGTTATCCGTGTTGATGCGTATCGCCCGGAAGCTGTTGAACCGTTTGAGAAGGTCAGAGGGGAGATTGAAGCCCTGGTTAAACGCAGCAAGGCAGAAGCCGCTCTGAATGCGCAGGCAGATACATTAATTGCCGCACTGAAAGAAGGCAAAGGTGATGCTGCACTAGCCGCCGCCGGTGTGAAATTTGGTGAAGCGCAAACTATCCAGCGCCTTAACCCGACAGATCCTGTGATTAACGCAGCGTTTACTCAGGCTCATCCTGTTGACGGTAAACCGACATACAGCCGCACAATTGATGCACAGGGTAATATTGTGCTGGTACAGCTGGATAAAGTCATTGCCGGTAATGCAACAGATAAGGAAAAAACGGAACTGCGCGAGGTATTACGTCAGCAAATGGCATCAACGGAGCTTGAATCATTACTGATCAACCTGCGTTTGAATGCTGATATTGATGTGAAAAGTATGGACTAGCATTTCAGAGCGTATACCGTAAATTATAAAGCCAGTTAACCCGCGGGGTT