Homologs in group_3452

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15620 FBDBKF_15620 100.0 Morganella morganii S1 alpA Phage transcriptional regulator, AlpA
EHELCC_15980 EHELCC_15980 100.0 Morganella morganii S2 alpA Phage transcriptional regulator, AlpA
LHKJJB_16415 LHKJJB_16415 100.0 Morganella morganii S3 alpA Phage transcriptional regulator, AlpA
HKOGLL_16185 HKOGLL_16185 100.0 Morganella morganii S5 alpA Phage transcriptional regulator, AlpA

Distribution of the homologs in the orthogroup group_3452

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3452

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_16390
Feature type CDS
Gene alpA
Product Phage transcriptional regulator, AlpA
Location 24998 - 25342 (strand: 1)
Length 345 (nucleotides) / 114 (amino acids)
In genomic island -

Contig

Accession ZDB_533
Length 80662 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3452
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF12728 Helix-turn-helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3311 Transcription (K)
Mobilome: prophages, transposons (X)		 KX DNA-binding transcriptional regulator AlpA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07733 prophage regulatory protein - -

Protein Sequence

MTEKEMLQRMLMDMSLLKKLITEHIKNEQRPDTTKEILTVEECAELTGLKKSTLYRLTHERKIPFFKPNGNRVFFRRADILAWLQSNRVASSYEIDKAAADHLVTNRKLYGRRY

Flanking regions ( +/- flanking 50bp)

CCCACTTTCCCACATTTCCCTGTTCGATTTTGAGGTAAAGGAGTATCAACATGACTGAAAAAGAGATGCTTCAGCGCATGCTGATGGATATGTCATTGCTTAAAAAACTGATTACCGAGCATATCAAAAACGAGCAACGTCCTGACACAACAAAGGAAATCCTGACAGTTGAGGAATGTGCTGAGCTGACAGGGTTAAAGAAAAGCACTTTGTACCGGTTGACTCACGAACGCAAGATCCCATTCTTCAAACCTAATGGTAACCGTGTGTTCTTCAGGAGAGCCGATATCTTGGCTTGGTTGCAGAGTAACCGAGTGGCTTCTTCTTATGAGATTGATAAAGCCGCTGCTGATCATCTAGTGACTAACCGAAAATTGTATGGCCGGAGATATTAGGTTGAGGTTTAACCTTTTGAAAATAAATAGAAATGGTTGGATGCGTTACA