Homologs in group_1952

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14650 FBDBKF_14650 100.0 Morganella morganii S1 ndh NADH dehydrogenase, FAD-containing subunit
EHELCC_15455 EHELCC_15455 100.0 Morganella morganii S2 ndh NADH dehydrogenase, FAD-containing subunit
LHKJJB_15855 LHKJJB_15855 100.0 Morganella morganii S3 ndh NADH dehydrogenase, FAD-containing subunit
HKOGLL_14975 HKOGLL_14975 100.0 Morganella morganii S5 ndh NADH dehydrogenase, FAD-containing subunit
F4V73_RS07445 F4V73_RS07445 95.4 Morganella psychrotolerans - NAD(P)/FAD-dependent oxidoreductase
PMI_RS04295 PMI_RS04295 84.3 Proteus mirabilis HI4320 - NAD(P)/FAD-dependent oxidoreductase

Distribution of the homologs in the orthogroup group_1952

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1952

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P00393 0.0 723 81 0 434 1 ndh Type II NADH:quinone oxidoreductase Escherichia coli (strain K12)
P44856 2.13e-168 483 54 1 430 3 ndh Type II NADH:quinone oxidoreductase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q2YWP9 2.15e-42 157 29 11 391 3 SAB0807 Type II NADH:quinone oxidoreductase Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q6GIE7 2.51e-42 157 29 11 391 3 SAR0903 Type II NADH:quinone oxidoreductase Staphylococcus aureus (strain MRSA252)
Q7A6J4 2.51e-42 157 29 11 391 1 SA0802 Type II NADH:quinone oxidoreductase Staphylococcus aureus (strain N315)
Q99VE0 2.51e-42 157 29 11 391 3 None Type II NADH:quinone oxidoreductase Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HHE4 2.51e-42 157 29 11 391 3 SACOL0944 Type II NADH:quinone oxidoreductase Staphylococcus aureus (strain COL)
Q2FZV7 2.51e-42 157 29 11 391 1 SAOUHSC_00878 Type II NADH:quinone oxidoreductase Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FID4 2.51e-42 157 29 11 391 3 SAUSA300_0844 Type II NADH:quinone oxidoreductase Staphylococcus aureus (strain USA300)
Q8NXG0 3.29e-41 154 29 11 391 3 MW0823 Type II NADH:quinone oxidoreductase Staphylococcus aureus (strain MW2)
Q6GAY5 3.29e-41 154 29 11 391 3 SAS0811 Type II NADH:quinone oxidoreductase Staphylococcus aureus (strain MSSA476)
Q49W80 6.03e-40 150 28 12 394 3 SSP1834 Type II NADH:quinone oxidoreductase Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
P80861 1.83e-38 146 31 6 373 1 yjlD NADH dehydrogenase-like protein YjlD Bacillus subtilis (strain 168)
Q4L4V6 4.44e-38 145 29 12 393 3 SH2010 Type II NADH:quinone oxidoreductase Staphylococcus haemolyticus (strain JCSC1435)
Q8CPV5 7.47e-38 145 27 9 391 3 SE_0635 Type II NADH:quinone oxidoreductase Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
P95200 1.56e-37 145 28 15 440 1 ndhA Type II NADH:quinone oxidoreductase NdhA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q5HQM1 3.14e-37 143 27 9 391 3 SERP0527 Type II NADH:quinone oxidoreductase Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
P95160 2.78e-35 139 27 10 428 1 ndh Type II NADH:quinone oxidoreductase Ndh Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P73735 4.14e-31 126 27 12 433 1 ndbB Demethylphylloquinone reductase NdbB Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q55CD9 1.49e-29 122 26 7 367 3 DDB_G0270104 Probable NADH dehydrogenase Dictyostelium discoideum
O05267 4.54e-29 120 27 12 392 3 yumB NADH dehydrogenase-like protein YumB Bacillus subtilis (strain 168)
O32117 8.4e-27 113 25 13 405 3 yutJ NADH dehydrogenase-like protein YutJ Bacillus subtilis (strain 168)
M1BYJ7 2.32e-25 112 27 11 339 3 NDB1 External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial Solanum tuberosum
Q9ST62 2.09e-24 109 27 11 330 1 NDB1 External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial Solanum tuberosum
Q8GXR9 6.4e-24 107 28 12 387 1 NDC1 Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial Arabidopsis thaliana
Q1JPL4 1e-23 107 24 10 333 1 NDB1 External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial Arabidopsis thaliana
O14121 2.21e-22 103 27 11 373 3 SPAC3A11.07 Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O43090 3.38e-22 102 24 8 360 3 SPBC947.15c Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
F4JJJ3 2.47e-21 100 26 13 383 2 NDB3 External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial Arabidopsis thaliana
Q94BV7 1.76e-20 97 29 15 344 1 NDB2 External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial Arabidopsis thaliana
Q9SKT7 3.04e-18 90 26 11 327 1 NDB4 External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial Arabidopsis thaliana
P40215 9.34e-18 89 29 16 363 1 NDE1 External NADH-ubiquinone oxidoreductase 1, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O80874 1.59e-16 85 23 11 423 1 NDA2 Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial Arabidopsis thaliana
F2Z699 4.45e-16 84 24 12 357 1 NDH2 External alternative NADH-ubiquinone oxidoreductase, mitochondrial Yarrowia lipolytica (strain CLIB 122 / E 150)
Q8GWA1 3.49e-15 80 24 15 428 2 NDA1 Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial Arabidopsis thaliana
Q54NS8 5.13e-15 79 26 17 345 3 aifB Apoptosis-inducing factor homolog B Dictyostelium discoideum
P32340 3.12e-14 78 25 16 448 1 NDI1 Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9ST63 3.9e-12 71 23 15 452 1 NDA1 Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial Solanum tuberosum
M0ZYF3 6.3e-12 70 23 15 454 3 NDA1 Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial Solanum tuberosum
A6TCX6 1.63e-11 68 28 17 351 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Q07500 1.97e-11 69 24 12 347 1 NDE2 External NADH-ubiquinone oxidoreductase 2, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q6D8S1 5.94e-11 67 25 13 337 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
B5XVA0 1.05e-10 66 28 17 351 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Klebsiella pneumoniae (strain 342)
A0A142C7A5 6.16e-10 64 24 17 429 1 phnG Oxidoreductase phnG Penicillium herquei
Q0VTB0 1.18e-09 63 29 11 251 1 rubB Rubredoxin-NAD(+) reductase Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2)
Q3YYF3 3.67e-09 62 26 16 357 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Shigella sonnei (strain Ss046)
A7ZQE0 8.35e-09 60 26 17 358 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Escherichia coli O139:H28 (strain E24377A / ETEC)
B6I697 1.22e-08 60 26 17 358 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Escherichia coli (strain SE11)
A0A067XMP1 1.27e-08 60 25 14 357 2 ptaL Oxidoreductase ptaL Pestalotiopsis fici (strain W106-1 / CGMCC3.15140)
Q31X75 3.33e-08 58 26 17 358 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Shigella boydii serotype 4 (strain Sb227)
B7NSJ1 5.21e-08 58 25 17 358 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q8U1K9 6.55e-08 57 23 17 377 1 PF1197 NAD(P)H:rubredoxin oxidoreductase Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
P59403 1.67e-07 56 25 16 357 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Shigella flexneri
Q0T1D6 1.67e-07 56 25 16 357 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Shigella flexneri serotype 5b (strain 8401)
Q8D4F7 5.54e-07 55 27 6 192 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Vibrio vulnificus (strain CMCP6)
B5FXE5 5.64e-07 55 22 14 385 2 AIFM2 Ferroptosis suppressor protein 1 Taeniopygia guttata
Q8S3R2 6.86e-07 55 26 11 261 2 MDAR2 Monodehydroascorbate reductase 2, peroxisomal Oryza sativa subsp. japonica
A1A653 3.31e-06 52 26 11 273 2 fer8 Fe-regulated protein 8 Ustilago maydis (strain 521 / FGSC 9021)
Q7MFY7 5.81e-06 52 27 6 192 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Vibrio vulnificus (strain YJ016)
Q54NS9 1.06e-05 51 23 15 332 3 aifA Apoptosis-inducing factor homolog A Dictyostelium discoideum
P16640 1.29e-05 50 24 14 333 1 camA Putidaredoxin reductase CamA Pseudomonas putida
A8GG95 1.45e-05 50 25 16 345 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Serratia proteamaculans (strain 568)
B5FG80 2.26e-05 50 26 9 236 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Aliivibrio fischeri (strain MJ11)
Q06458 3.33e-05 50 32 5 117 3 nasB Nitrite reductase [NAD(P)H] large subunit Klebsiella oxytoca
W8X9R5 3.47e-05 49 25 13 330 1 ctmF Probable ferredoxin reductase CtmF Castellaniella defragrans (strain DSM 12143 / CCUG 39792 / 65Phen)
Q9HTK9 3.51e-05 49 25 13 327 1 alkT Rubredoxin-NAD(+) reductase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A9MFX5 3.52e-05 49 24 13 340 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B5BEP9 4.96e-05 48 24 14 340 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Salmonella paratyphi A (strain AKU_12601)
Q5PF36 4.96e-05 48 24 14 340 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P9WJJ1 0.00017 47 24 4 240 1 Rv1812c NADH dehydrogenase-like protein Rv1812c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WJJ0 0.000185 47 24 4 240 2 MT1860 NADH dehydrogenase-like protein MT1860 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q10499 0.00024 47 23 10 324 3 aif1 Apoptosis-inducing factor 1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q5E3X0 0.000254 46 26 5 171 3 norW Nitric oxide reductase FlRd-NAD(+) reductase Aliivibrio fischeri (strain ATCC 700601 / ES114)
P38681 0.000364 47 31 4 116 2 nit-6 Nitrite reductase [NAD(P)H] Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_15985
Feature type CDS
Gene ndh
Product NADH dehydrogenase, FAD-containing subunit
Location 59510 - 60814 (strand: -1)
Length 1305 (nucleotides) / 434 (amino acids)

Contig

Accession ZDB_532
Length 116685 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1952
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07992 Pyridine nucleotide-disulphide oxidoreductase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1252 Energy production and conversion (C) C NADH dehydrogenase, FAD-containing subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03885 NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] Oxidative phosphorylation
Metabolic pathways		 -

Protein Sequence

MTTPNTKIVIIGGGAGGLELATQLGHKLGKKKKAEITLVDRNSSHLWKPLLHEVATGSLDDGVDALSYLAHARNHYFNFQLGSMTGLDRDSKNITLAEIRDNNGDLLVPERELDYDILVMALGSTSNDFGTPGIKENCIFLDSPSQANRFHNEMLNLFLKYSASHGEGDKVNIAIVGGGATGVELSAELYNAVEQLHSYGFKGLNTDALNVTLVEAGERILPALPPKIAGAAHQELTKLGVRVMTQTMVTSADESGLNTKDGEHITASLMVWAAGIKAPDFLKEIGGLETNRINQLVVKPTLQTTRDDAIFAIGDCSSCPKKEGGFVPPRAQSAHQMATRCYHNILAVLNDKPLKDYVFKDHGSLVSLSRFSTVGSLMGNLMRGNMMIEGRIARVMYISLYRMHQIALHGYIKTGLMMLVGGINRIIRPRLKLH

Flanking regions ( +/- flanking 50bp)

TTTTCCTGAAGAGCCCTGAGATAACGTTAGATTATTTTTCAGAGGATGTTATGACTACACCGAATACGAAGATTGTGATTATCGGCGGTGGCGCAGGCGGGCTGGAACTGGCAACGCAACTCGGCCACAAATTAGGTAAGAAGAAAAAAGCGGAAATCACTCTGGTCGATCGCAACAGCAGCCACCTGTGGAAACCGCTGTTACACGAAGTGGCGACCGGTTCTCTGGATGACGGCGTGGATGCCCTGAGCTACCTGGCGCATGCCCGCAATCACTATTTCAATTTCCAGCTGGGTTCAATGACCGGACTGGATCGCGACAGTAAAAATATCACCCTGGCAGAAATCCGTGATAACAACGGTGACCTGCTGGTACCGGAGCGTGAGCTGGATTATGACATTCTGGTGATGGCGCTGGGCAGTACCTCCAACGATTTCGGTACACCGGGGATCAAAGAAAACTGCATCTTCCTCGACAGCCCGTCACAGGCAAACCGCTTCCATAATGAGATGCTGAACCTGTTCCTGAAATACTCCGCCAGCCACGGCGAAGGCGACAAAGTGAATATCGCGATTGTCGGCGGCGGGGCGACCGGAGTGGAACTGTCAGCAGAACTGTATAATGCCGTTGAGCAGCTTCACAGCTACGGTTTTAAAGGCCTGAATACCGATGCACTGAATGTGACGCTGGTGGAGGCGGGTGAGCGTATTCTGCCTGCTCTGCCGCCGAAAATTGCCGGTGCCGCTCACCAGGAGCTCACCAAACTGGGTGTGCGTGTGATGACGCAGACCATGGTCACCAGCGCCGACGAATCCGGCCTGAACACCAAAGACGGCGAGCATATCACGGCGAGCCTGATGGTCTGGGCGGCAGGTATCAAAGCGCCTGATTTCCTGAAAGAGATTGGCGGGCTGGAAACCAACCGTATTAATCAGCTGGTGGTCAAACCAACACTCCAGACCACCCGTGATGACGCAATTTTCGCTATCGGTGACTGCTCATCCTGCCCGAAAAAAGAGGGCGGATTTGTTCCGCCGCGCGCGCAGTCAGCACATCAGATGGCGACCCGCTGCTATCACAACATCCTTGCGGTACTCAATGATAAGCCGCTGAAGGATTATGTGTTTAAAGATCACGGCTCACTGGTTTCCCTCTCCCGGTTCAGTACGGTCGGGAGCCTGATGGGTAACCTGATGCGCGGGAATATGATGATTGAAGGGCGTATTGCCCGTGTGATGTATATTTCTCTGTATCGTATGCATCAGATTGCGCTGCACGGTTATATTAAAACCGGGCTGATGATGCTGGTTGGCGGTATAAACCGGATTATCCGTCCGCGGCTGAAATTACATTAATTGATCTTCCCCAAAAATGACGCCTCCGGGCGTCATTTTTTATAATAATA