Homologs in group_1595

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10405 FBDBKF_10405 100.0 Morganella morganii S1 hofQ Type II secretory pathway, component HofQ
EHELCC_14740 EHELCC_14740 100.0 Morganella morganii S2 hofQ Type II secretory pathway, component HofQ
LHKJJB_14775 LHKJJB_14775 100.0 Morganella morganii S3 hofQ Type II secretory pathway, component HofQ
HKOGLL_13395 HKOGLL_13395 100.0 Morganella morganii S5 hofQ Type II secretory pathway, component HofQ
F4V73_RS14100 F4V73_RS14100 78.0 Morganella psychrotolerans - transporter
PMI_RS14965 PMI_RS14965 49.5 Proteus mirabilis HI4320 - competence protein E

Distribution of the homologs in the orthogroup group_1595

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1595

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P34749 4.18e-80 253 47 5 298 3 hofQ DNA utilization protein HofQ Escherichia coli (strain K12)
P31772 7.64e-66 217 38 3 307 3 comE Competence protein E Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q5FAD2 7.38e-36 141 28 6 322 3 pilQ Type IV pilus biogenesis and competence protein PilQ Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
Q9JVW4 2.35e-34 137 28 7 321 1 pilQ Type IV pilus biogenesis and competence protein PilQ Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Q70M91 2.43e-34 137 28 7 321 1 pilQ Type IV pilus biogenesis and competence protein PilQ Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9ZHF3 2.47e-34 137 28 7 321 3 pilQ Type IV pilus biogenesis and competence protein PilQ Neisseria meningitidis serogroup B / serotype 15 (strain H44/76)
P34750 5.14e-32 130 26 7 326 1 pilQ Fimbrial assembly protein PilQ Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P31780 4.46e-29 121 29 8 334 1 exeD Secretin ExeD Aeromonas hydrophila
P03668 3.71e-27 114 27 5 297 3 None Putative assembly protein ORF430 Pseudomonas phage Pf3
P45778 2.54e-23 104 28 11 337 3 exeD Secretin ExeD Aeromonas salmonicida
P35819 5e-23 103 27 4 264 3 pilQ Type IV pilus biogenesis and competence protein PilQ Neisseria gonorrhoeae
P45758 1.19e-19 93 26 7 333 1 gspD Putative secretin GspD Escherichia coli (strain K12)
P15644 1.57e-18 90 26 9 328 1 pulD Secretin PulD Klebsiella pneumoniae
E3PJ86 7.68e-18 88 22 9 380 1 gspD2 Secretin GspD 2 Escherichia coli O78:H11 (strain H10407 / ETEC)
Q01565 9.86e-18 88 27 9 279 1 outD Secretin OutD Dickeya dadantii (strain 3937)
P31701 2.31e-17 86 25 7 325 3 outD Secretin OutD Pectobacterium carotovorum subsp. carotovorum
P45779 7.5e-17 85 26 11 356 1 epsD Secretin GspD Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P35818 9.48e-17 85 26 7 288 1 xcpQ Secretin XcpQ Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O80300 6.25e-16 82 25 6 246 3 IV Virion export protein Escherichia phage If1
P31700 8.93e-16 82 27 9 281 3 outD Secretin OutD Dickeya chrysanthemi
P15420 5.51e-15 79 22 8 315 3 IV Virion export protein Enterobacteria phage I2-2
P03664 7.15e-15 78 23 9 312 3 IV Virion export protein Enterobacteria phage fd
P55702 7.27e-15 78 24 4 233 3 NGR_a00790 Uncharacterized protein y4xJ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P03666 9.18e-15 78 23 9 312 1 IV Virion export protein Enterobacteria phage f1
P03665 1.05e-14 78 23 9 312 3 IV Virion export protein Enterobacteria phage M13
P29041 2.31e-14 77 22 6 288 1 xpsD Secretin XpsD Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
Q01723 4.43e-14 77 25 5 257 3 sctC Type 3 secretion system secretin Pseudomonas syringae pv. syringae
Q52498 1.68e-13 75 22 5 287 3 sctC Type 3 secretion system secretin Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
P03667 4.74e-13 73 20 7 310 3 IV Virion export protein Salmonella phage IKe
P80151 8.07e-12 70 23 5 284 3 sctC Type 3 secretion system secretin Xanthomonas euvesicatoria
Q01244 2.96e-11 68 24 11 274 1 sctC Type 3 secretion system secretin Yersinia enterocolitica
Q56974 8.33e-11 66 24 11 274 1 sctC Type 3 secretion system secretin Yersinia pestis
D0ZWR9 2.04e-10 65 24 10 249 2 sctC2 SPI-2 type 3 secretion system secretin Salmonella typhimurium (strain 14028s / SGSC 2262)
Q55293 2.62e-10 65 21 4 257 3 sctC Type 3 secretion system secretin Shigella sonnei
Q04641 3.93e-10 64 21 4 257 1 sctC Type 3 secretion system secretin Shigella flexneri
P35672 5.75e-10 64 23 5 255 1 sctC1 SPI-1 type 3 secretion system secretin Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9RW95 1.94e-08 59 22 8 276 1 DR_0774 Probable type IV piliation system protein DR_0774 Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_14570
Feature type CDS
Gene hofQ
Product Type II secretory pathway, component HofQ
Location 36923 - 37984 (strand: 1)
Length 1062 (nucleotides) / 353 (amino acids)

Contig

Accession ZDB_530
Length 141725 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1595
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00263 Bacterial type II and III secretion system protein
PF03958 Bacterial type II/III secretion system short domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4796 Intracellular trafficking, secretion, and vesicular transport (U) U Type II secretory pathway, component HofQ

Protein Sequence

MMMIKAKSVARRITGCCLLLAAAASGGQHPRDLFQPVIISEEPAVLTELPGMYSPPLIPESRQSRTFTLQYADAADMLALLKQHHGEWFTDNKAPEADLLTNSLFIEAQPDVLSRAEAWLAQMDQPQQQVQITAHIVSGSREGLHELGLQWGTVLPSPESGNRLQLHQARGNNTFTFNIARLGGHLLEMELSALEQEQQLDIVASPRLTTAHEHPASIKQGAEIPYTTQNHESGSQVQFREAVLGMEVTPQILRDNKVRLTLHISRNAPGAALMQNGSEQYSIDKQEITTQVIVRSGETLILGGIFQQDKGRQVTGVPYLSSIPLMGKLFTHQYDKLSRRELVIFITPQLIDI

Flanking regions ( +/- flanking 50bp)

GCATCTGGCATTACCGGGGGCGGATTCACCGGATCCGGAAAAGGAATGGCATGATGATGATTAAAGCAAAATCAGTCGCCCGGCGGATCACCGGTTGTTGTCTGCTGCTTGCGGCAGCGGCTTCCGGCGGGCAGCATCCGAGGGATCTTTTTCAGCCTGTCATCATCAGTGAGGAACCGGCCGTGCTGACAGAACTCCCCGGGATGTATTCCCCGCCGCTGATACCGGAAAGCAGGCAGAGCCGCACATTTACCCTGCAATATGCGGATGCAGCGGACATGCTGGCCCTGCTGAAACAGCATCACGGGGAATGGTTTACAGATAATAAAGCGCCGGAAGCCGACCTGCTGACAAATTCCCTCTTTATAGAAGCACAACCGGATGTGCTGTCGCGGGCGGAAGCCTGGCTGGCACAGATGGATCAGCCGCAGCAGCAGGTGCAGATTACGGCGCATATTGTGTCCGGCTCGCGGGAAGGGCTGCATGAGCTGGGGCTGCAGTGGGGAACCGTGCTGCCGTCACCGGAGTCCGGCAACCGCCTGCAGCTGCATCAGGCGCGGGGAAATAACACGTTCACCTTTAATATCGCCCGTCTCGGCGGCCATCTGCTGGAGATGGAACTGAGCGCACTGGAGCAGGAACAGCAGCTGGATATTGTCGCCAGCCCGCGCCTGACCACGGCGCACGAGCATCCCGCCAGTATCAAACAGGGAGCGGAAATTCCGTACACCACGCAAAACCATGAGTCCGGTTCACAGGTACAGTTCCGCGAGGCGGTACTGGGGATGGAGGTGACACCGCAGATCCTGCGGGATAATAAAGTACGTCTGACACTGCATATCAGCCGTAATGCTCCCGGTGCGGCGCTGATGCAGAACGGCAGCGAGCAGTATTCCATTGATAAGCAGGAAATCACCACACAGGTGATTGTCCGCAGCGGGGAAACCCTGATCCTCGGCGGGATTTTTCAGCAGGATAAAGGCAGGCAGGTGACCGGGGTGCCGTATTTATCGTCGATCCCATTGATGGGAAAGCTTTTTACTCATCAATACGATAAACTCAGCCGCCGTGAATTAGTGATATTCATTACACCGCAGTTGATCGATATTTAGTAACTGTATCAATATCAGCATGTTGTATCATTATTCACGGATTATATGCG