Homologs in group_1382

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08540 FBDBKF_08540 100.0 Morganella morganii S1 tamA Outer membrane translocation and assembly module TamA
EHELCC_12985 EHELCC_12985 100.0 Morganella morganii S2 tamA Outer membrane translocation and assembly module TamA
LHKJJB_13230 LHKJJB_13230 100.0 Morganella morganii S3 tamA Outer membrane translocation and assembly module TamA
HKOGLL_11800 HKOGLL_11800 100.0 Morganella morganii S5 tamA Outer membrane translocation and assembly module TamA
F4V73_RS09765 F4V73_RS09765 92.4 Morganella psychrotolerans - autotransporter assembly complex family protein
PMI_RS16875 PMI_RS16875 69.7 Proteus mirabilis HI4320 - autotransporter assembly complex family protein

Distribution of the homologs in the orthogroup group_1382

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1382

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
D2TN56 0.0 780 63 2 574 1 tamA Translocation and assembly module subunit TamA Citrobacter rodentium (strain ICC168)
E1WAU4 0.0 768 62 2 574 3 tamA Translocation and assembly module subunit TamA Salmonella typhimurium (strain SL1344)
P0ADE4 0.0 758 62 2 574 1 tamA Translocation and assembly module subunit TamA Escherichia coli (strain K12)
P0ADE5 0.0 758 62 2 574 3 tamA Translocation and assembly module subunit TamA Escherichia coli O157:H7
P44038 7.97e-162 477 43 5 557 1 tama Translocation and assembly module subunit TamA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
C5B7R5 5.27e-09 62 22 22 559 3 bamA Outer membrane protein assembly factor BamA Edwardsiella ictaluri (strain 93-146)
B1JQG8 6.48e-09 62 22 20 469 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q667J7 6.48e-09 62 22 20 469 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TL83 6.48e-09 62 22 20 469 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis (strain Pestoides F)
Q1CFF5 6.48e-09 62 22 20 469 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Nepal516)
A9R388 6.48e-09 62 22 20 469 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Angola)
Q8ZH58 6.48e-09 62 22 20 469 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis
B2JZ26 6.48e-09 62 22 20 469 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CAM6 6.48e-09 62 22 20 469 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Antiqua)
A7FFH7 6.48e-09 62 22 20 469 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B2VE18 7.78e-08 59 20 20 572 3 bamA Outer membrane protein assembly factor BamA Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
A8GID8 1.04e-07 58 22 16 471 3 bamA Outer membrane protein assembly factor BamA Serratia proteamaculans (strain 568)
Q7N8N9 6.23e-07 56 21 24 647 3 bamA Outer membrane protein assembly factor BamA Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q9S341 7.33e-07 55 21 23 651 3 bamA Outer membrane protein assembly factor BamA Photorhabdus luminescens
Q729H8 9.82e-06 52 30 4 142 3 bamA Outer membrane protein assembly factor BamA Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
O32629 0.000445 47 21 20 471 3 bamA Outer membrane protein assembly factor BamA Haemophilus influenzae

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_13325
Feature type CDS
Gene tamA
Product Outer membrane translocation and assembly module TamA
Location 74056 - 75798 (strand: -1)
Length 1743 (nucleotides) / 580 (amino acids)

Contig

Accession ZDB_528
Length 162442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1382
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01103 Omp85 superfamily domain
PF07244 Surface antigen variable number repeat
PF17243 POTRA domain TamA domain 1

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0729 Cell wall/membrane/envelope biogenesis (M) M Outer membrane translocation and assembly module TamA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07278 translocation and assembly module TamA - -

Protein Sequence

MIRYPLVCVVAVSLTSPLAYSANLRLKVEGLSGQLEKNARVQLSTITTDEVVADGRFRARVEKAIKEGLRPLGYYEPVITFDYQDNAPPARPVLYARVVPGEPVKIAGVTVDIEGAAKTDPAFKKFITKNTPETGTVVNHGEYESFKSGLSGLALKRGYFDAEMEKSQLGIALSRHAAYWDFVFNSGKRYRFGKVNYQGSQISDEYLEGLVPFKEGDYYTSDQLAEFNRLLAETGWFQSAIVTPDIAKARADNSDYLTMDASFTPRAQNFVELGGGFATDVGPRVQAKWNKPWVNSSGHSLTSSISLSAPEQIIDTSYRIPLKVNPIEQYYAVSGGYKRTDLNDTKADTATVSVSRNWDLSTGWQYGINMRWSLSHFTQADITNTTMLLYPGVNVSRVRSRGGMMPSWGDSQRYSVDVSNEMWGSDVDFSIFRARNVWVRTPWDGHRFVMRGNLGWIETNNFDKVPPDLRFFAGGDGSIRGYRYNKISPEDADGKLTGGSRLVVGSLEYQYNVTGDWWGAVFVDSGEVVNDIKRSNFKTGAGVGVRWASPVGPIKFDLAAPVGDNETKNIQFYIGLGAEL

Flanking regions ( +/- flanking 50bp)

GAATGAATAAAAGTATATCTCAGTCAAATCGCAGAAATTCAGGAGTTGATGTGATCCGGTACCCTCTTGTTTGTGTTGTCGCTGTGTCTCTCACATCCCCTCTGGCATATAGTGCAAATCTTCGCTTAAAAGTGGAAGGGCTCAGCGGGCAACTTGAAAAAAATGCAAGAGTCCAGCTTTCCACTATCACGACCGATGAGGTCGTGGCTGACGGCCGTTTTCGTGCCCGGGTGGAAAAAGCCATCAAAGAGGGGCTTCGTCCGCTGGGGTATTATGAGCCGGTGATCACCTTTGATTATCAGGACAATGCACCGCCTGCACGGCCGGTGTTGTATGCCCGTGTCGTCCCGGGGGAACCGGTTAAAATTGCCGGGGTTACCGTGGATATCGAAGGCGCGGCAAAAACCGATCCCGCATTCAAAAAATTCATTACCAAAAATACACCTGAAACCGGGACTGTCGTCAATCACGGCGAGTACGAAAGTTTTAAAAGCGGATTATCCGGGCTTGCCTTAAAACGCGGCTATTTTGATGCCGAAATGGAAAAAAGCCAGCTCGGTATTGCGCTTTCCCGTCATGCGGCCTACTGGGATTTTGTGTTCAACAGCGGCAAACGATACCGTTTCGGGAAAGTGAATTACCAGGGCTCGCAAATCAGCGATGAATACCTGGAGGGTCTGGTGCCGTTTAAAGAAGGTGATTACTACACCTCTGATCAACTGGCAGAATTTAACCGTCTGCTGGCGGAAACCGGCTGGTTCCAGTCCGCGATCGTCACCCCTGATATTGCAAAGGCACGGGCGGATAACAGTGATTATCTGACCATGGATGCCTCATTCACCCCGCGCGCACAGAACTTTGTTGAGCTGGGCGGCGGCTTTGCCACCGATGTGGGGCCGCGTGTTCAGGCGAAATGGAATAAGCCGTGGGTGAATTCCAGCGGCCACAGCCTGACCTCCAGTATCAGCCTGTCCGCGCCGGAACAGATTATTGATACCTCTTACCGCATCCCGCTGAAGGTCAACCCGATTGAGCAGTATTACGCCGTCTCCGGCGGGTATAAGCGTACCGATCTGAACGATACCAAAGCCGATACTGCGACAGTCAGTGTTTCCCGTAACTGGGATTTATCCACCGGCTGGCAGTACGGTATCAATATGCGCTGGAGTCTCAGCCACTTTACCCAGGCGGATATCACCAACACCACCATGCTGCTCTATCCGGGGGTGAATGTCAGCCGTGTCCGTTCGCGGGGCGGGATGATGCCATCCTGGGGGGACAGTCAGCGCTACTCAGTGGATGTTTCCAATGAAATGTGGGGCTCGGATGTGGATTTTTCCATTTTCCGCGCCCGTAACGTCTGGGTGAGAACGCCGTGGGATGGTCACCGCTTTGTGATGCGCGGCAACCTCGGCTGGATTGAAACCAATAACTTCGACAAAGTCCCGCCTGATCTGCGTTTCTTCGCCGGTGGCGACGGCAGTATCCGGGGTTACCGTTACAACAAAATCTCACCGGAAGATGCTGACGGCAAACTGACAGGGGGCTCGCGGCTGGTGGTCGGCTCGCTGGAATACCAGTACAACGTGACCGGTGACTGGTGGGGCGCGGTGTTTGTGGACAGCGGTGAAGTGGTGAATGATATCAAACGGAGTAATTTCAAAACCGGTGCCGGTGTCGGGGTACGCTGGGCATCACCGGTCGGGCCGATCAAATTTGACCTTGCCGCGCCGGTAGGTGATAACGAAACGAAAAATATCCAGTTTTACATCGGTTTGGGGGCAGAACTCTGATGAAATGGCTGAAGTATCTGAAATGGCCGGCAATCATTCTGCTGGTCCTC