Homologs in group_959

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05260 FBDBKF_05260 100.0 Morganella morganii S1 yciU HI1450 family dsDNA-mimic protein
EHELCC_12330 EHELCC_12330 100.0 Morganella morganii S2 yciU HI1450 family dsDNA-mimic protein
LHKJJB_12530 LHKJJB_12530 100.0 Morganella morganii S3 yciU HI1450 family dsDNA-mimic protein
HKOGLL_11145 HKOGLL_11145 100.0 Morganella morganii S5 yciU HI1450 family dsDNA-mimic protein
F4V73_RS05715 F4V73_RS05715 81.9 Morganella psychrotolerans - HI1450 family dsDNA-mimic protein
PMI_RS06555 PMI_RS06555 59.1 Proteus mirabilis HI4320 - HI1450 family dsDNA-mimic protein

Distribution of the homologs in the orthogroup group_959

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_959

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A4WB85 2.07e-25 94 55 1 93 3 Ent638_2296 UPF0263 protein Ent638_2296 Enterobacter sp. (strain 638)
B7LS30 1.13e-24 92 54 1 93 3 yciU UPF0263 protein YciU Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B2TZZ3 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B1LH52 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli (strain SMS-3-5 / SECEC)
B6I9W1 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli (strain SE11)
B7N459 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0A8L7 1.86e-24 91 53 1 93 1 yciU UPF0263 protein YciU Escherichia coli (strain K12)
B1ITK8 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
P0A8L8 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TIC3 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A7ZZI4 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli O9:H4 (strain HS)
B1XAT8 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli (strain K12 / DH10B)
C4ZTU0 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli (strain K12 / MC4100 / BW2952)
B7LY03 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli O8 (strain IAI1)
B7MU35 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli O81 (strain ED1a)
B7NVL7 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5YYF3 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0A8L9 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli O157:H7
B7LHJ3 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli (strain 55989 / EAEC)
B7UQD8 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZL19 1.86e-24 91 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli O139:H28 (strain E24377A / ETEC)
A8AG49 2.42e-24 91 53 1 93 3 CKO_01325 UPF0263 protein CKO_01325 Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q8Z7E5 3.18e-24 90 53 1 93 3 yciU UPF0263 protein YciU Salmonella typhi
B5BIA7 3.18e-24 90 53 1 93 3 yciU UPF0263 protein YciU Salmonella paratyphi A (strain AKU_12601)
Q5PNL2 3.18e-24 90 53 1 93 3 yciU UPF0263 protein YciU Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57NR9 3.18e-24 90 53 1 93 3 yciU UPF0263 protein YciU Salmonella choleraesuis (strain SC-B67)
B7ML00 4.17e-24 90 53 1 93 3 yciU UPF0263 protein YciU Escherichia coli O45:K1 (strain S88 / ExPEC)
C6DGY2 4.6e-24 90 54 1 93 3 PC1_1990 UPF0263 protein PC1_1990 Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q8ZP48 5.25e-24 90 53 1 93 3 yciU UPF0263 protein YciU Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A9MWP8 5.25e-24 90 53 1 93 3 yciU UPF0263 protein YciU Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q6D4S1 6.46e-24 90 54 1 93 3 ECA2319 UPF0263 protein ECA2319 Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
A9MPD4 7.21e-24 90 52 1 93 3 yciU UPF0263 protein YciU Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q83LD1 9.26e-24 89 52 1 93 3 yciU UPF0263 protein YciU Shigella flexneri
Q7N466 3.08e-23 88 50 1 93 3 plu2488 UPF0263 protein plu2488 Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A6TAJ8 3.63e-23 88 51 1 93 3 KPN78578_21580 UPF0263 protein KPN78578_21580 Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XQA8 3.63e-23 88 51 1 93 3 KPK_2119 UPF0263 protein KPK_2119 Klebsiella pneumoniae (strain 342)
Q8ZEI3 4.61e-23 88 52 1 93 3 YPO2187 UPF0263 protein YPO2187/y2032/YP_1985 Yersinia pestis
A9R8K9 4.61e-23 88 52 1 93 3 YpAngola_A2157 UPF0263 protein YpAngola_A2157 Yersinia pestis bv. Antiqua (strain Angola)
Q66AM0 4.61e-23 88 52 1 93 3 YPTB2110 UPF0263 protein YPTB2110 Yersinia pseudotuberculosis serotype I (strain IP32953)
A7FI51 4.61e-23 88 52 1 93 3 YpsIP31758_1954 UPF0263 protein YpsIP31758_1954 Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q87NB9 4.79e-23 87 56 0 79 3 VP1949 UPF0263 protein VP1949 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A1JQ46 5.15e-23 87 51 1 93 3 YE2228 UPF0263 protein YE2228 Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A8GFA1 8.88e-23 87 52 1 93 3 Spro_2690 UPF0263 protein Spro_2690 Serratia proteamaculans (strain 568)
A7MRY9 1.03e-22 87 56 0 79 3 VIBHAR_02752 UPF0263 protein VIBHAR_02752 Vibrio campbellii (strain ATCC BAA-1116)
B3GYC8 1.35e-22 86 51 2 94 3 APP7_1400 UPF0263 protein APP7_1400 Actinobacillus pleuropneumoniae serotype 7 (strain AP76)
B0BQT7 1.35e-22 86 51 2 94 3 APJL_1366 UPF0263 protein APJL_1366 Actinobacillus pleuropneumoniae serotype 3 (strain JL03)
A3N1Z6 1.35e-22 86 51 2 94 3 APL_1348 UPF0263 protein APL_1348 Actinobacillus pleuropneumoniae serotype 5b (strain L20)
A5UEW7 2.51e-22 86 50 2 94 3 CGSHiGG_01135 UPF0263 protein CGSHiGG_01135 Haemophilus influenzae (strain PittGG)
P44199 1.18e-21 84 50 2 94 1 HI_1450 UPF0263 protein HI_1450 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
B8F5L9 1.25e-21 84 51 2 93 3 HAPS_1002 UPF0263 protein HAPS_1002 Glaesserella parasuis serovar 5 (strain SH0165)
Q7VMJ1 2.65e-21 83 50 2 94 3 HD_0986 UPF0263 protein HD_0986 Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q65TT7 3.08e-21 83 50 2 94 3 MS1016 UPF0263 protein MS1016 Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
B0UUJ4 3.26e-21 83 48 2 94 3 HSM_1473 UPF0263 protein HSM_1473 Histophilus somni (strain 2336)
B2VKV3 3.67e-21 83 50 1 93 3 ETA_15890 UPF0263 protein ETA_15890 Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
Q0I370 3.8e-21 83 48 2 94 3 HS_0995 UPF0263 protein HS_0995 Histophilus somni (strain 129Pt)
A6VNS2 8.99e-21 82 48 2 94 3 Asuc_1259 UPF0263 protein Asuc_1259 Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
A5F1Y1 1.2e-20 82 53 0 79 3 VC0395_A0828 UPF0263 protein VC0395_A0828/VC395_1327 Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q9KSP8 1.2e-20 82 53 0 79 3 VC_1208 UPF0263 protein VC_1208 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
C3LLQ4 1.2e-20 82 53 0 79 3 VCM66_1163 UPF0263 protein VCM66_1163 Vibrio cholerae serotype O1 (strain M66-2)
Q9CN99 2.55e-20 80 50 2 94 3 PM0536 UPF0263 protein PM0536 Pasteurella multocida (strain Pm70)
A7MNA3 3.7e-20 80 47 1 93 3 ESA_01547 UPF0263 protein ESA_01547 Cronobacter sakazakii (strain ATCC BAA-894)
Q4QKH7 7.29e-20 80 47 2 94 3 NTHI1680 UPF0263 protein NTHI1680 Haemophilus influenzae (strain 86-028NP)
Q6LRZ3 1.75e-19 79 50 0 79 3 PBPRA1522 UPF0263 protein PBPRA1522 Photobacterium profundum (strain SS9)
Q7MM45 3.13e-19 78 50 0 79 3 VV1228 UPF0263 protein VV1228 Vibrio vulnificus (strain YJ016)
Q8D8C1 7.09e-19 77 50 0 79 3 VV1_3059 UPF0263 protein VV1_3059 Vibrio vulnificus (strain CMCP6)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_12670
Feature type CDS
Gene yciU
Product HI1450 family dsDNA-mimic protein
Location 122760 - 123044 (strand: -1)
Length 285 (nucleotides) / 94 (amino acids)

Contig

Accession ZDB_527
Length 181446 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_959
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04269 Protein of unknown function, DUF440

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3099 Function unknown (S) S Uncharacterized conserved protein YciU, UPF0263 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09901 uncharacterized protein - -

Protein Sequence

MAYDLFLEQAMDNLDPADVLLFNLQFEEIGGAEIVPTGSDWSEFAPFLAQNPACAEVVIGLAPDENADIDQIFARVLISRHFTGSPEYAVRWRE

Flanking regions ( +/- flanking 50bp)

CTATGAGTATCTCTCTGCCCCGTCGCCTCAGCGAACAGGAAACGATTGAAATGGCCTATGACCTGTTTCTGGAACAGGCAATGGATAACCTTGACCCGGCAGACGTCCTGCTGTTTAACCTTCAGTTTGAAGAGATTGGCGGTGCTGAAATTGTACCAACCGGCAGTGACTGGTCAGAATTCGCACCTTTTCTGGCACAAAACCCGGCATGTGCCGAAGTGGTTATCGGCCTGGCTCCGGATGAAAATGCTGATATCGACCAGATTTTTGCCCGTGTGCTTATTTCCCGGCATTTTACCGGCTCACCAGAATACGCTGTCCGCTGGCGGGAATAATCTCCCCGCCGGTCACGCGGTCAGCAGCGGCATTTTTCACGCCGGGCGAT