Homologs in group_1873

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13985 FBDBKF_13985 100.0 Morganella morganii S1 relA GTP diphosphokinase
EHELCC_11660 EHELCC_11660 100.0 Morganella morganii S2 relA GTP diphosphokinase
LHKJJB_11860 LHKJJB_11860 100.0 Morganella morganii S3 relA GTP diphosphokinase
HKOGLL_10475 HKOGLL_10475 100.0 Morganella morganii S5 relA GTP diphosphokinase
F4V73_RS12840 F4V73_RS12840 95.4 Morganella psychrotolerans relA GTP diphosphokinase
PMI_RS01045 PMI_RS01045 83.8 Proteus mirabilis HI4320 relA GTP diphosphokinase

Distribution of the homologs in the orthogroup group_1873

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1873

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AG23 0.0 1214 78 1 741 3 relA GTP pyrophosphokinase Shigella flexneri
P0AG20 0.0 1214 78 1 741 1 relA GTP pyrophosphokinase Escherichia coli (strain K12)
P0AG21 0.0 1214 78 1 741 3 relA GTP pyrophosphokinase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AG22 0.0 1214 78 1 741 3 relA GTP pyrophosphokinase Escherichia coli O157:H7
P55133 0.0 986 63 3 743 3 relA GTP pyrophosphokinase Photobacterium angustum (strain S14 / CCUG 15956)
P44644 0.0 982 62 6 747 3 relA GTP pyrophosphokinase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O54408 8.56e-178 529 38 10 692 1 relA GTP pyrophosphokinase Bacillus subtilis (strain 168)
Q6GG70 1.79e-167 503 38 11 693 3 relA GTP pyrophosphokinase Staphylococcus aureus (strain MRSA252)
P0A0E9 1.89e-167 503 38 11 693 3 relA GTP pyrophosphokinase Staphylococcus aureus (strain MW2)
P0A0F0 1.89e-167 503 38 11 693 3 relA GTP pyrophosphokinase Staphylococcus aureus
Q6G8T5 1.89e-167 503 38 11 693 3 relA GTP pyrophosphokinase Staphylococcus aureus (strain MSSA476)
Q99TL8 1.89e-167 503 38 11 693 1 relA GTP pyrophosphokinase Staphylococcus aureus (strain N315)
Q931Q4 6e-167 501 38 11 693 1 relA GTP pyrophosphokinase Staphylococcus aureus (strain Mu50 / ATCC 700699)
P74007 9.8e-165 496 38 14 691 3 spoT Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O52177 1.32e-162 491 37 11 705 3 relA GTP pyrophosphokinase Myxococcus xanthus
P52560 4.83e-162 492 37 13 734 3 relA GTP pyrophosphokinase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q8CS97 1.69e-160 484 37 10 690 3 relA GTP pyrophosphokinase Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HNR8 1.69e-160 484 37 10 690 3 relA GTP pyrophosphokinase Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
O87331 3.45e-158 479 36 11 695 3 relA GTP pyrophosphokinase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q54089 2.12e-156 474 37 12 697 1 relA Bifunctional (p)ppGpp synthase/hydrolase RelA Streptococcus dysgalactiae subsp. equisimilis
P9WHG9 1.42e-154 469 36 10 698 1 relA Bifunctional (p)ppGpp synthase/hydrolase RelA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WHG8 1.42e-154 469 36 10 698 3 relA Bifunctional (p)ppGpp synthase/hydrolase RelA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66015 2.94e-154 471 36 10 698 3 relA Probable GTP pyrophosphokinase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q49640 3.4e-151 462 37 9 650 3 relA Probable GTP pyrophosphokinase Mycobacterium leprae (strain TN)
O85709 2.39e-150 462 35 10 727 3 relA GTP pyrophosphokinase Streptomyces antibioticus
O67012 1.52e-149 455 34 12 738 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Aquifex aeolicus (strain VF5)
Q9KNM2 1.64e-131 409 31 8 684 1 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P0AG26 1.19e-129 404 32 13 696 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Shigella flexneri
P0AG24 1.19e-129 404 32 13 696 1 spoT Bifunctional (p)ppGpp synthase/hydrolase SpoT Escherichia coli (strain K12)
P0AG25 1.19e-129 404 32 13 696 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Escherichia coli O157:H7
P43811 1.7e-113 361 30 11 687 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8YG65 2.87e-109 352 31 16 741 1 rsh GTP pyrophosphokinase rsh Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
A5VPI9 3.22e-109 352 31 16 741 3 rsh GTP pyrophosphokinase rsh Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Q8CY42 4.51e-109 352 31 16 741 1 rsh GTP pyrophosphokinase rsh Brucella suis biovar 1 (strain 1330)
Q57E90 1.12e-108 350 31 16 741 1 rsh GTP pyrophosphokinase rsh Brucella abortus biovar 1 (strain 9-941)
Q2YN11 1.12e-108 350 31 16 741 3 rsh GTP pyrophosphokinase rsh Brucella abortus (strain 2308)
O34098 3.94e-107 346 29 16 748 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Spiroplasma citri
O51216 3.03e-91 302 36 6 449 3 spoT Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
P0DKG8 1.42e-65 237 26 21 733 1 RSH1 Putative GTP diphosphokinase RSH1, chloroplastic Arabidopsis thaliana
F4JHA2 3.05e-64 233 26 22 734 1 RSH1 Putative GTP diphosphokinase RSH1, chloroplastic Arabidopsis thaliana
Q9SYH1 8.51e-63 226 37 7 339 2 RSH3 Probable GTP diphosphokinase RSH3, chloroplastic Arabidopsis thaliana
Q9M5P5 7.34e-61 221 37 8 339 2 RSH3 Probable GTP diphosphokinase RSH3, chloroplastic Arabidopsis thaliana
Q9LVJ3 1.96e-60 219 36 6 333 2 RSH2 Probable GTP diphosphokinase RSH2, chloroplastic Arabidopsis thaliana
Q9AYT5 2.18e-59 219 29 11 489 2 RSH1 Putative GTP diphosphokinase RSH1, chloroplastic Oryza sativa subsp. japonica
Q9M5P6 4.69e-59 216 36 6 333 2 RSH2 Probable GTP diphosphokinase RSH2, chloroplastic Arabidopsis thaliana
Q67UU0 2.39e-57 211 36 7 334 2 RSH3 Probable GTP diphosphokinase RSH3, chloroplastic Oryza sativa subsp. japonica
Q7XAP4 1.46e-56 209 35 5 332 2 RSH2 Probable GTP diphosphokinase RSH2, chloroplastic Oryza sativa subsp. japonica
P75386 5.88e-43 169 24 13 629 3 spoT Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P47520 9.14e-35 145 27 2 327 3 spoT Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
Q84R11 8.99e-27 119 27 7 328 2 CRSH Probable GTP diphosphokinase CRSH, chloroplastic Arabidopsis thaliana
Q6ATB4 2.61e-26 117 31 6 264 1 CRSH1 GTP diphosphokinase CRSH1, chloroplastic Oryza sativa subsp. japonica
Q4UMH6 1.76e-22 107 31 3 208 4 RF_0381 Putative ankyrin repeat protein RF_0381 Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q75IS2 8e-19 94 23 7 333 1 CRSH3 GTP diphosphokinase CRSH3, chloroplastic Oryza sativa subsp. japonica
Q6ATB2 1.12e-18 94 24 8 323 1 CRSH2 GTP diphosphokinase CRSH2, chloroplastic Oryza sativa subsp. japonica
P39583 4.98e-06 51 29 2 119 1 ywaC GTP pyrophosphokinase YwaC Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_12000
Feature type CDS
Gene relA
Product GTP diphosphokinase
Location 177234 - 179468 (strand: -1)
Length 2235 (nucleotides) / 744 (amino acids)

Contig

Accession ZDB_526
Length 188522 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1873
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02824 TGS domain
PF04607 Region found in RelA / SpoT proteins
PF13291 ACT domain
PF13328 HD domain
PF19296 RelA/SpoT, AH and RIS domains

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0317 Signal transduction mechanisms (T)
Transcription (K)		 TK (p)ppGpp synthase/hydrolase, HD superfamily

Protein Sequence

MVAVRSAHLTPAGEFDPAHWINSLGLHNPVTGEKLEEVWHYCHQKVDGHQDAALLLGRGIEMVEILSTLSMDLDSLRAALLFPLAEAEILGEEEISEAFGSAIWLLVKGVMDMDAIRQLKATHNDETSSVQVDNIRRMLLSMVEDFRCVVIKLAERIAHLREVKDAGEDERVLAAKECFNIYAPLANRLGIGQLKWELEDYCFRYLHPDDYKRIASLLHERRLDREEYIDNFVTTLRNDMKEEGIQAEIYGRPKHIYSIWRKMQKKSLSFDELFDVRAVRIVVERLQDCYAALGIVHTHFRHLPDEFDDYVANPKPNGYQSIHTVVLGPAGKTLEIQIRTRQMHEDAELGVAAHWKYKEGTAGGGKTGSYENRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFSYQLQMGDQIEVITQKQPNPSRDWLNPNLGYVTTSRGRAKIHNWFRKQDRDKNIIAGRQMLDNELAAQDISLKEAEKLLIARYNVHSLDEVLAGIGVGDIRINQLSNYLQSKLNKPTAEEADREALKTLEKAPPAKPAPAHQSSGRIVVEGVGNLMHHIARCCQPIPGDDIVGFITKGRGISIHRADCEQLAELQEQAPERLVEAVWSASYSSGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVRSHSDVKQQIATIDMDMEIYNIQTLSRVLAKLNQLPDVIEAKRHTQ

Flanking regions ( +/- flanking 50bp)

CGATGGTGCTTTTCACAAAGACACCACCGGTCAGTCAGTAGGGAGAATGTATGGTCGCGGTAAGAAGTGCGCATTTAACACCGGCCGGTGAGTTTGACCCGGCACACTGGATTAACAGCCTCGGGCTGCATAACCCGGTGACGGGTGAAAAACTGGAAGAGGTCTGGCATTACTGTCATCAGAAGGTTGATGGACATCAGGATGCGGCGCTGTTGCTCGGGCGCGGTATTGAGATGGTGGAGATTTTATCCACCCTCAGTATGGATCTCGACAGTCTGCGCGCAGCGTTGCTTTTTCCGCTGGCCGAAGCGGAGATCCTCGGAGAGGAAGAGATAAGCGAAGCCTTTGGTTCCGCTATCTGGCTGCTGGTCAAAGGTGTGATGGATATGGATGCTATCCGTCAGCTGAAAGCCACCCATAACGACGAAACCAGTTCGGTGCAGGTGGATAACATCCGCCGTATGCTGCTCTCCATGGTGGAAGATTTCCGCTGCGTGGTTATCAAACTGGCAGAGCGGATAGCCCATCTGCGCGAAGTGAAAGATGCCGGTGAGGATGAGCGCGTTCTGGCCGCCAAAGAGTGTTTCAATATTTATGCCCCGCTGGCGAACCGCCTCGGGATCGGGCAGCTTAAATGGGAGCTGGAGGATTACTGCTTCCGTTATCTGCACCCGGATGATTACAAACGCATTGCCAGCCTGCTGCATGAGCGCCGTCTTGACCGCGAAGAGTATATTGATAACTTTGTCACGACCCTGCGCAACGACATGAAAGAAGAGGGCATTCAGGCCGAGATCTACGGACGGCCGAAGCATATCTACAGTATCTGGCGCAAGATGCAGAAAAAATCGCTCTCCTTTGATGAGCTGTTTGATGTCCGTGCCGTGCGGATTGTGGTGGAGCGTCTTCAGGACTGCTACGCCGCGCTGGGGATTGTTCATACCCATTTCCGTCATCTGCCGGATGAGTTTGATGACTATGTGGCGAACCCGAAACCGAACGGCTATCAGTCGATTCATACCGTGGTACTGGGGCCGGCGGGTAAAACCCTGGAGATTCAGATCCGCACCCGGCAGATGCATGAGGATGCGGAACTCGGCGTTGCCGCGCACTGGAAATACAAAGAAGGTACCGCAGGCGGCGGCAAAACCGGCAGTTACGAGAACCGTATCGCCTGGCTGCGTAAACTGATCGCGTGGCAGGAAGAGATGGCCGATTCCGGCGAAATGCTGGATGAAGTGCGCAGTCAGGTATTTGATGACCGCGTTTACGTTTTTACCCCGAAAGGGGATGTGGTGGATTTACCGGCAGGCTCCACGCCGCTCGATTTCGCCTACCATATCCACAGCGATGTGGGTCACCGCTGCATCGGCGCGAAAATCGGCGGCCGTATTGTGCCGTTCAGTTATCAGTTGCAGATGGGCGATCAGATTGAAGTGATCACCCAGAAACAGCCGAACCCGAGCCGTGACTGGCTGAACCCGAACCTGGGGTATGTCACCACCAGCCGGGGCCGCGCCAAGATCCATAACTGGTTCCGCAAGCAGGATCGCGATAAAAATATTATCGCCGGGCGGCAGATGCTGGACAACGAACTGGCCGCGCAGGATATCAGCCTGAAAGAGGCGGAAAAACTGCTGATCGCCCGTTATAACGTTCACTCGCTGGATGAAGTGCTGGCCGGTATTGGTGTGGGTGATATCCGCATCAACCAGCTGTCGAACTACCTGCAAAGCAAACTGAACAAGCCGACTGCGGAAGAAGCTGACCGCGAGGCCCTGAAAACCCTGGAAAAAGCCCCGCCGGCCAAACCGGCACCGGCTCACCAGAGCAGCGGCCGTATTGTGGTTGAGGGCGTCGGTAACCTGATGCATCACATCGCCCGCTGCTGCCAGCCGATTCCCGGGGATGATATCGTCGGCTTTATCACCAAAGGCCGGGGAATTTCTATCCACCGCGCGGATTGCGAACAGCTGGCGGAATTGCAGGAGCAGGCACCGGAACGTCTGGTGGAAGCGGTCTGGAGTGCGAGTTACTCCAGCGGCTATTCCCTGGTGGTGCGGGTGGTGGCAAATGACCGCAGCGGCCTGCTGCGCGATATCACCACCATTCTGGCCAACGAGAAAGTGAATGTTCTCGGGGTGCGCAGCCACAGTGATGTAAAACAGCAGATTGCCACCATCGATATGGATATGGAAATCTACAATATCCAGACCCTCAGCCGTGTGCTGGCAAAACTGAACCAGCTGCCGGATGTGATTGAGGCAAAACGTCACACTCAGTAAAACGGCCGGAAATCGGTTACACTGAAAAGCAGACTCCGGTCTGCTTTTTT