Homologs in group_2826

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09280 FBDBKF_09280 100.0 Morganella morganii S1 sipB Cell invasion protein SipB
EHELCC_10130 EHELCC_10130 100.0 Morganella morganii S2 sipB Cell invasion protein SipB
LHKJJB_10880 LHKJJB_10880 100.0 Morganella morganii S3 sipB Cell invasion protein SipB
HKOGLL_13940 HKOGLL_13940 100.0 Morganella morganii S5 sipB Cell invasion protein SipB
F4V73_RS10685 F4V73_RS10685 35.5 Morganella psychrotolerans sctE type III secretion system translocon subunit SctE

Distribution of the homologs in the orthogroup group_2826

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2826

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q56134 3.18e-05 50 31 3 135 1 sctE1 SPI-1 type 3 secretion system translocon protein SctE Salmonella typhi
Q56019 3.26e-05 50 31 3 135 1 sctE1 SPI-1 type 3 secretion system translocon protein SctE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q79BT1 3.26e-05 50 31 3 135 3 sctE1 SPI-1 type 3 secretion system translocon protein SctE Salmonella dublin
Q03945 8.2e-05 49 26 4 205 3 sctE Type 3 secretion system translocon protein SctE Shigella dysenteriae

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_10475
Feature type CDS
Gene sipB
Product Cell invasion protein SipB
Location 34763 - 36574 (strand: 1)
Length 1812 (nucleotides) / 603 (amino acids)
In genomic island -

Contig

Accession ZDB_525
Length 191527 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2826
Orthogroup size 6
N. genomes 6

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Genomic region

Kegg Ortholog Annotation(s)

Protein Sequence

MTVIIDKTSDFGVLNTTTSSENVNKNSGANKQNRVNDPIGEFSKVMVSDVSKKSTSANDGKKKSELNKPKLDNPKLNKDTAGSESTTESKNTPESKDTTDSKDTTGKKKGGFSLNELHSLLMVFYSEEKFKINSRAHGYNLKFIKELWSDNKVNQLSELISESGDLINDHIEATAEYYFSQMGSELLGKMPDGELKNKLTGNGVDKFKSKDEISLYLRSKTNADEVIKNINSESVLYKDKTKLFKSFSDEMNKFPVLGDELGSLIAGNREEITAELNSLHEMAALQDEAKDIVKDISDIFGSQRKSDMNYSKSLTILMGKIADLRNKLAQRKLENDRLIATIQQKTLQDKTDADGAEMAKKIKKAERLQALFKWLGPLLIALMVILTALTGGLLAKALAAVIVVVTIISEIVKAAGGPDIMATIMTPVTKLVEVVQKFIKDMAMKIGQKLGLPPAELKKLEEKMEIIAMVLAVVVVMAVFAAAGAVAGKVIGQVVSESVKEILRQVMVEVKRLLISMTLTSTVVNGINSVTQAELNKDVMKLNADIDLDQELLDKLMELMEKIMAAFSESQQDLNKMKEQLGKIGKDDFQRKKAIIQSGPLAV

Flanking regions ( +/- flanking 50bp)

GCTCAGGAATTAAAGGGATTTTTAAGATTCTGATATAAAAAGGGAATTGTATGACTGTAATTATTGATAAAACATCAGATTTTGGTGTTTTAAATACCACAACGTCAAGTGAAAATGTAAATAAAAATTCAGGTGCAAATAAACAAAATCGTGTTAACGATCCTATCGGGGAGTTTAGCAAGGTGATGGTTAGTGATGTTAGTAAAAAATCAACATCAGCTAATGATGGAAAGAAAAAATCAGAATTAAATAAACCGAAATTGGATAACCCAAAGTTAAATAAAGATACCGCAGGCAGTGAAAGTACTACGGAAAGTAAAAATACCCCGGAAAGTAAGGATACCACAGACAGTAAAGATACTACGGGTAAGAAAAAAGGTGGATTTTCACTTAATGAATTACATTCATTGCTGATGGTTTTTTATTCTGAAGAGAAATTTAAAATTAATTCAAGAGCTCATGGGTACAATCTTAAATTCATCAAGGAATTATGGTCTGATAATAAAGTAAATCAATTATCAGAGCTTATTTCTGAATCCGGGGATTTGATTAATGACCATATTGAAGCAACGGCAGAGTATTATTTCTCACAAATGGGCAGTGAGCTGTTGGGAAAGATGCCGGATGGTGAGCTGAAAAATAAATTAACCGGTAATGGTGTTGATAAGTTTAAAAGTAAAGATGAAATTTCTTTATATTTAAGAAGTAAAACAAATGCCGATGAAGTTATTAAAAATATCAATTCGGAGTCAGTGCTTTATAAGGATAAAACCAAGTTATTTAAATCATTTTCTGATGAGATGAATAAATTTCCTGTGCTGGGTGATGAACTCGGTTCTCTCATTGCCGGAAATCGTGAGGAGATTACGGCTGAATTAAATTCATTACATGAAATGGCCGCTCTTCAGGATGAAGCGAAAGATATTGTGAAAGATATTTCTGATATATTCGGCTCTCAGCGTAAGTCTGATATGAATTATAGTAAATCATTAACTATTTTGATGGGTAAAATAGCAGATCTGCGGAATAAGCTAGCACAGCGTAAACTTGAAAATGATCGTCTTATAGCCACAATTCAGCAAAAAACATTGCAGGATAAAACCGATGCTGACGGAGCTGAAATGGCAAAAAAAATAAAAAAAGCAGAGCGTTTACAGGCCCTTTTTAAATGGTTAGGGCCATTATTGATCGCATTAATGGTTATATTAACTGCTCTGACTGGTGGTTTACTGGCAAAAGCACTGGCCGCAGTGATTGTGGTTGTCACTATTATTAGTGAAATTGTTAAGGCGGCGGGTGGCCCGGATATTATGGCAACAATAATGACACCGGTGACAAAATTGGTGGAAGTTGTCCAGAAGTTTATTAAAGATATGGCTATGAAAATTGGCCAAAAACTTGGGCTGCCACCGGCTGAGTTAAAAAAACTGGAAGAAAAAATGGAAATTATTGCCATGGTACTTGCAGTTGTTGTTGTGATGGCGGTGTTTGCTGCTGCAGGTGCTGTTGCCGGAAAAGTTATCGGTCAGGTGGTATCAGAATCGGTAAAGGAAATATTGAGACAGGTAATGGTGGAGGTTAAAAGATTATTAATTTCAATGACGCTGACATCTACTGTCGTTAACGGTATAAATTCAGTCACTCAGGCAGAACTTAATAAAGATGTAATGAAATTAAACGCTGATATAGATTTAGATCAGGAATTGCTGGATAAGTTGATGGAATTGATGGAAAAAATAATGGCAGCTTTTTCAGAATCACAGCAGGATTTAAATAAAATGAAAGAGCAGTTAGGTAAGATAGGAAAAGACGATTTTCAGCGTAAGAAGGCTATTATACAGTCAGGGCCATTAGCTGTTTAATTTAAAAAGGAATTTATTATGACGACGATAACCACAGCAAATAATACGAA