Homologs in group_1456

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_10130 EHELCC_10130 100.0 Morganella morganii S2 sipB Cell invasion protein SipB
NLDBIP_10475 NLDBIP_10475 100.0 Morganella morganii S4 sipB Cell invasion protein SipB
LHKJJB_10880 LHKJJB_10880 100.0 Morganella morganii S3 sipB Cell invasion protein SipB
HKOGLL_13940 HKOGLL_13940 100.0 Morganella morganii S5 sipB Cell invasion protein SipB
F4V73_RS10685 F4V73_RS10685 35.5 Morganella psychrotolerans sctE type III secretion system translocon subunit SctE
PMI_RS13220 PMI_RS13220 24.9 Proteus mirabilis HI4320 sctE type III secretion system translocon subunit SctE

Distribution of the homologs in the orthogroup group_1456

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1456

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q56134 3.18e-05 50 31 3 135 1 sctE1 SPI-1 type 3 secretion system translocon protein SctE Salmonella typhi
Q56019 3.26e-05 50 31 3 135 1 sctE1 SPI-1 type 3 secretion system translocon protein SctE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q79BT1 3.26e-05 50 31 3 135 3 sctE1 SPI-1 type 3 secretion system translocon protein SctE Salmonella dublin
Q03945 8.2e-05 49 26 4 205 3 sctE Type 3 secretion system translocon protein SctE Shigella dysenteriae

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_09280
Feature type CDS
Gene sipB
Product Cell invasion protein SipB
Location 87801 - 89612 (strand: -1)
Length 1812 (nucleotides) / 603 (amino acids)

Contig

Accession contig_10
Length 146103 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1456
Orthogroup size 7
N. genomes 7

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Genomic region

Kegg Ortholog Annotation(s)

Protein Sequence

MTVIIDKTSDFGVLNTTTSSENVNKNSGANKQNRVNDPIGEFSKVMVSDVSKKSTSANDGKKKSELNKPKLDNPKLNKDTAGSESTTESKNTPESKDTTDSKDTTGKKKGGFSLNELHSLLMVFYSEEKFKINSRAHGYNLKFIKELWSDNKVNQLSELISESGDLINDHIEATAEYYFSQMGSELLGKMPDGELKNKLTGNGVDKFKSKDEISLYLRSKTNADEVIKNINSESVLYKDKTKLFKSFSDEMNKFPVLGDELGSLIAGNREEITAELNSLHEMAALQDEAKDIVKDISDIFGSQRKSDMNYSKSLTILMGKIADLRNKLAQRKLENDRLIATIQQKTLQDKTDADGAEMAKKIKKAERLQALFKWLGPLLIALMVILTALTGGLLAKALAAVIVVVTIISEIVKAAGGPDIMATIMTPVTKLVEVVQKFIKDMAMKIGQKLGLPPAELKKLEEKMEIIAMVLAVVVVMAVFAAAGAVAGKVIGQVVSESVKEILRQVMVEVKRLLISMTLTSTVVNGINSVTQAELNKDVMKLNADIDLDQELLDKLMELMEKIMAAFSESQQDLNKMKEQLGKIGKDDFQRKKAIIQSGPLAV

Flanking regions ( +/- flanking 50bp)

GCTCAGGAATTAAAGGGATTTTTAAGATTCTGATATAAAAAGGGAATTGTATGACTGTAATTATTGATAAAACATCAGATTTTGGTGTTTTAAATACCACAACGTCAAGTGAAAATGTAAATAAAAATTCAGGTGCAAATAAACAAAATCGTGTTAACGATCCTATCGGGGAGTTTAGCAAGGTGATGGTTAGTGATGTTAGTAAAAAATCAACATCAGCTAATGATGGAAAGAAAAAATCAGAATTAAATAAACCGAAATTGGATAACCCAAAGTTAAATAAAGATACCGCAGGCAGTGAAAGTACTACGGAAAGTAAAAATACCCCGGAAAGTAAGGATACCACAGACAGTAAAGATACTACGGGTAAGAAAAAAGGTGGATTTTCACTTAATGAATTACATTCATTGCTGATGGTTTTTTATTCTGAAGAGAAATTTAAAATTAATTCAAGAGCTCATGGGTACAATCTTAAATTCATCAAGGAATTATGGTCTGATAATAAAGTAAATCAATTATCAGAGCTTATTTCTGAATCCGGGGATTTGATTAATGACCATATTGAAGCAACGGCAGAGTATTATTTCTCACAAATGGGCAGTGAGCTGTTGGGAAAGATGCCGGATGGTGAGCTGAAAAATAAATTAACCGGTAATGGTGTTGATAAGTTTAAAAGTAAAGATGAAATTTCTTTATATTTAAGAAGTAAAACAAATGCCGATGAAGTTATTAAAAATATCAATTCGGAGTCAGTGCTTTATAAGGATAAAACCAAGTTATTTAAATCATTTTCTGATGAGATGAATAAATTTCCTGTGCTGGGTGATGAACTCGGTTCTCTCATTGCCGGAAATCGTGAGGAGATTACGGCTGAATTAAATTCATTACATGAAATGGCCGCTCTTCAGGATGAAGCGAAAGATATTGTGAAAGATATTTCTGATATATTCGGCTCTCAGCGTAAGTCTGATATGAATTATAGTAAATCATTAACTATTTTGATGGGTAAAATAGCAGATCTGCGGAATAAGCTAGCACAGCGTAAACTTGAAAATGATCGTCTTATAGCCACAATTCAGCAAAAAACATTGCAGGATAAAACCGATGCTGACGGAGCTGAAATGGCAAAAAAAATAAAAAAAGCAGAGCGTTTACAGGCCCTTTTTAAATGGTTAGGGCCATTATTGATCGCATTAATGGTTATATTAACTGCTCTGACTGGTGGTTTACTGGCAAAAGCACTGGCCGCAGTGATTGTGGTTGTCACTATTATTAGTGAAATTGTTAAGGCGGCGGGTGGCCCGGATATTATGGCAACAATAATGACACCGGTGACAAAATTGGTGGAAGTTGTCCAGAAGTTTATTAAAGATATGGCTATGAAAATTGGCCAAAAACTTGGGCTGCCACCGGCTGAGTTAAAAAAACTGGAAGAAAAAATGGAAATTATTGCCATGGTACTTGCAGTTGTTGTTGTGATGGCGGTGTTTGCTGCTGCAGGTGCTGTTGCCGGAAAAGTTATCGGTCAGGTGGTATCAGAATCGGTAAAGGAAATATTGAGACAGGTAATGGTGGAGGTTAAAAGATTATTAATTTCAATGACGCTGACATCTACTGTCGTTAACGGTATAAATTCAGTCACTCAGGCAGAACTTAATAAAGATGTAATGAAATTAAACGCTGATATAGATTTAGATCAGGAATTGCTGGATAAGTTGATGGAATTGATGGAAAAAATAATGGCAGCTTTTTCAGAATCACAGCAGGATTTAAATAAAATGAAAGAGCAGTTAGGTAAGATAGGAAAAGACGATTTTCAGCGTAAGAAGGCTATTATACAGTCAGGGCCATTAGCTGTTTAATTTAAAAAGGAATTTATTATGACGACGATAACCACAGCAAATAATACGAA