Homologs in group_1456

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09280 FBDBKF_09280 35.5 Morganella morganii S1 sipB Cell invasion protein SipB
EHELCC_10130 EHELCC_10130 35.5 Morganella morganii S2 sipB Cell invasion protein SipB
NLDBIP_10475 NLDBIP_10475 35.5 Morganella morganii S4 sipB Cell invasion protein SipB
LHKJJB_10880 LHKJJB_10880 35.5 Morganella morganii S3 sipB Cell invasion protein SipB
HKOGLL_13940 HKOGLL_13940 35.5 Morganella morganii S5 sipB Cell invasion protein SipB
PMI_RS13220 PMI_RS13220 24.0 Proteus mirabilis HI4320 sctE type III secretion system translocon subunit SctE

Distribution of the homologs in the orthogroup group_1456

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1456

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10685
Feature type CDS
Gene sctE
Product type III secretion system translocon subunit SctE
Location 265848 - 267635 (strand: 1)
Length 1788 (nucleotides) / 595 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1456
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04888 Secretion system effector C (SseC) like family

Protein Sequence

MDINSNLSSVKKTDDTQQEHSVSTAELQKTAGAVVAQHATATVSLVVNSTVKNKNNYKKPHLSGNNKSDGKEKEYKKTTVAETSCYEIFAKIQDYFFSEQADKYKNSAAINKKQYSCIMTDKQISVMNKRIDELSIMVDNHMDNLSDYYYGEFKCPEGVGGYLDYPGNMDKDFLAKFDKETKEKFISVAKDEKLKGALVTDKMATKSFKEYLVEKLDIANVHRTLFNKEKTSEEKIKAVSELLNNFSELPSENSAAGKKWMAALGNAQSELRYLHSQVELYSSMAAYCEQVANSNLNNNSNDRYENELAVIMAKLSDLREKMMQSKMESEIRVQRLQQLALQAKTEKEAADIEIKIKEAEELQALFKWLAPLIAFILLILAALTAGTMTAFIVALIFTAIMVIDAILDSLGKDGIMSTLMTPFTKLMEEIQQFIKSIALESARAEGKSEKEIKELEMKMEIIAMVVAMVVMVALMSALSSLIGKMVGKFMSETVKQIVKEIMKEVQRAMIVMSVSNAVTGGINTILQAKIDKEITRRIADIEFDQQLIDSLTEMMNRLMESFSANQEELRTLNEKTSAMARDSFRNWKAILHTSV

Flanking regions ( +/- flanking 50bp)

TAAAAGCATGCTAAGAAATTAGATTTTGTAGTATTAACTTAGGAAATAATATGGATATTAATTCTAATCTATCTTCCGTTAAAAAAACGGATGATACGCAGCAGGAGCATAGTGTCAGTACAGCAGAACTACAAAAAACAGCAGGGGCAGTGGTTGCGCAGCATGCTACAGCTACTGTTTCTTTAGTGGTTAATAGTACTGTAAAAAATAAAAACAATTACAAGAAGCCTCATCTTTCAGGCAATAATAAGTCTGATGGTAAAGAAAAGGAGTATAAAAAGACGACTGTAGCTGAAACTTCATGTTATGAAATATTCGCTAAAATACAGGATTACTTTTTTTCAGAGCAAGCTGATAAATATAAAAACAGTGCGGCTATAAATAAAAAACAATATTCATGTATTATGACGGATAAACAGATATCTGTTATGAATAAACGTATTGATGAATTGTCAATTATGGTGGATAACCATATGGATAACTTATCAGACTATTATTATGGAGAGTTTAAATGCCCTGAAGGAGTTGGTGGGTATTTAGATTATCCGGGAAATATGGATAAGGATTTTTTAGCTAAATTTGATAAGGAAACGAAAGAAAAATTTATCTCTGTAGCAAAGGATGAAAAGCTGAAGGGAGCATTAGTAACGGATAAAATGGCAACAAAGTCATTCAAAGAATATCTTGTTGAAAAACTTGATATTGCCAATGTTCATCGCACACTTTTTAATAAAGAAAAAACTTCAGAAGAAAAAATAAAAGCAGTCTCTGAACTGCTGAATAATTTTAGTGAACTACCATCAGAAAATAGTGCAGCCGGAAAAAAATGGATGGCTGCTCTTGGTAATGCACAATCTGAACTGAGGTATTTACACAGCCAGGTTGAGCTATATAGCAGCATGGCTGCCTATTGTGAACAAGTAGCGAATAGTAATCTAAATAATAATTCAAATGACAGATACGAAAATGAATTAGCGGTGATCATGGCGAAATTGTCAGATTTACGTGAAAAAATGATGCAGAGCAAAATGGAAAGTGAAATCCGGGTTCAGCGGCTTCAGCAACTGGCATTGCAGGCAAAAACAGAAAAAGAAGCGGCAGATATAGAGATAAAAATCAAAGAAGCCGAAGAGTTACAGGCACTATTTAAATGGCTGGCCCCCTTAATCGCATTTATTTTACTGATATTAGCGGCGCTTACGGCGGGCACGATGACCGCTTTCATTGTAGCTCTTATTTTTACTGCCATTATGGTCATTGATGCAATTCTGGACTCACTGGGTAAAGACGGCATTATGAGTACGCTGATGACACCGTTTACAAAGTTAATGGAAGAAATTCAGCAATTTATTAAAAGTATTGCTCTTGAATCCGCGAGAGCGGAAGGGAAATCTGAAAAAGAGATCAAAGAATTAGAGATGAAAATGGAGATTATCGCGATGGTTGTGGCCATGGTGGTGATGGTCGCGCTGATGTCTGCATTGAGTTCCCTTATCGGGAAAATGGTCGGTAAATTTATGTCTGAGACAGTAAAACAGATAGTAAAAGAGATCATGAAAGAAGTGCAGCGTGCAATGATTGTCATGTCGGTTTCGAATGCCGTAACTGGTGGGATAAATACCATTCTCCAGGCAAAGATTGATAAGGAAATCACCCGGCGCATTGCCGATATCGAATTTGATCAACAGCTTATTGATTCACTGACAGAGATGATGAACAGGCTGATGGAAAGCTTTTCAGCAAATCAGGAAGAGTTGCGCACGTTAAATGAGAAAACCAGTGCAATGGCAAGAGACAGTTTTCGTAACTGGAAAGCGATATTACACACTTCAGTGTAGTTAATTAAATTAAAAGGAATTTTCAATGACTTCACCAATCTTATCCCCTG