Homologs in group_1790

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13185 FBDBKF_13185 100.0 Morganella morganii S1 - DNA primase
EHELCC_08910 EHELCC_08910 100.0 Morganella morganii S2 - DNA primase
LHKJJB_05030 LHKJJB_05030 100.0 Morganella morganii S3 - DNA primase
HKOGLL_05885 HKOGLL_05885 100.0 Morganella morganii S5 - DNA primase
F4V73_RS02030 F4V73_RS02030 57.9 Morganella psychrotolerans - toprim domain-containing protein
PMI_RS12055 PMI_RS12055 32.9 Proteus mirabilis HI4320 - primase-helicase zinc-binding domain-containing protein

Distribution of the homologs in the orthogroup group_1790

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1790

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P10277 9.17e-08 57 34 3 86 1 Alpha Putative P4-specific DNA primase Enterobacteria phage P4

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_09235
Feature type CDS
Gene -
Product DNA primase
Location 247978 - 248964 (strand: 1)
Length 987 (nucleotides) / 328 (amino acids)

Contig

Accession ZDB_523
Length 257158 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1790
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08273 Zinc-binding domain of primase-helicase
PF13362 Toprim domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4643 Mobilome: prophages, transposons (X) X Uncharacterized domain associated with phage/plasmid primase

Protein Sequence

MNTAEAAKGQWEKIFAHYGLPPITGKRHFTGKCPICEKKGKFRIDDQDGRGTYICTCSSGTGFQLLEKTQGKSFKQLADEIDQLLGNNREKEVLKPVSSNTRSDREKFISCYAQMPDLKDTSAAGYLQNRGIFTLPAEHIRFCERQPTRKGMAVINYQAMWALATDSKGQLCYLHRTYLDGDRKADINVVKRMTKLQEDNYLDYAESVAIRMFPVASTLGVAEGIETALSCKQVYGVNTWATINAGFMDKFTAPKGVTHLIVFADADWGSATGHAAAFACAKRNLVANNDVEKVSVRWPDKGDFNDLIRDGSEVRELTFYREKHQEAA

Flanking regions ( +/- flanking 50bp)

GCAGATTTAAAACAGCAACTGAATAAAAACGCACAGCAGGGAGAATTATTGTGAATACAGCTGAAGCAGCAAAGGGGCAGTGGGAAAAGATTTTTGCACACTACGGACTGCCGCCGATCACCGGGAAGCGGCATTTTACAGGAAAGTGCCCGATATGTGAGAAAAAGGGAAAATTTCGCATAGACGATCAGGATGGCCGGGGAACGTACATCTGCACCTGCAGTTCCGGCACAGGATTTCAGTTGCTGGAAAAAACACAGGGTAAGAGCTTTAAGCAGCTGGCGGATGAGATTGATCAGCTGCTCGGAAATAACCGGGAAAAAGAGGTTCTGAAGCCGGTCAGCAGCAATACCCGTTCAGACCGTGAAAAATTTATCAGTTGCTATGCTCAGATGCCGGATCTGAAAGACACCTCAGCGGCGGGCTACCTGCAAAACCGGGGCATATTTACGTTACCGGCAGAACATATCCGGTTTTGTGAGAGACAGCCAACCCGTAAAGGCATGGCGGTTATTAATTATCAGGCCATGTGGGCGCTGGCCACGGACTCAAAAGGTCAGCTGTGTTATCTGCACCGCACGTATCTGGACGGTGACCGGAAGGCCGATATCAACGTGGTAAAGCGCATGACAAAGCTGCAGGAAGATAACTATCTGGATTATGCCGAATCAGTGGCGATCCGCATGTTCCCGGTAGCATCCACGCTGGGAGTGGCAGAGGGAATAGAAACAGCCCTGTCCTGTAAACAGGTTTACGGGGTAAACACCTGGGCAACGATTAATGCCGGATTCATGGATAAGTTCACTGCACCGAAAGGAGTGACTCACCTGATTGTTTTCGCTGATGCAGACTGGGGCAGCGCAACCGGACATGCTGCGGCTTTTGCCTGTGCCAAGCGTAACCTTGTTGCAAACAACGATGTGGAGAAGGTCAGCGTTCGCTGGCCTGATAAAGGTGATTTTAATGACCTGATCCGTGACGGAAGTGAAGTCCGTGAACTGACATTTTACCGGGAAAAACACCAGGAGGCTGCGTAATGAAACTCGAAAGCGCATTAAAACAATTTCATCCGAAGTCACCGACATTC