Homologs in group_1895

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14145 FBDBKF_14145 100.0 Morganella morganii S1 nuoF NADH-quinone oxidoreductase subunit NuoF
EHELCC_08135 EHELCC_08135 100.0 Morganella morganii S2 nuoF NADH-quinone oxidoreductase subunit NuoF
LHKJJB_05805 LHKJJB_05805 100.0 Morganella morganii S3 nuoF NADH-quinone oxidoreductase subunit NuoF
HKOGLL_05110 HKOGLL_05110 100.0 Morganella morganii S5 nuoF NADH-quinone oxidoreductase subunit NuoF
F4V73_RS02790 F4V73_RS02790 98.0 Morganella psychrotolerans nuoF NADH-quinone oxidoreductase subunit NuoF
PMI_RS08625 PMI_RS08625 88.2 Proteus mirabilis HI4320 nuoF NADH-quinone oxidoreductase subunit NuoF

Distribution of the homologs in the orthogroup group_1895

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1895

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P33901 0.0 818 88 2 448 3 nuoF NADH-quinone oxidoreductase subunit F Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P31979 0.0 815 87 2 448 1 nuoF NADH-quinone oxidoreductase subunit F Escherichia coli (strain K12)
Q9I0J7 0.0 710 79 0 422 3 nuoF NADH-quinone oxidoreductase subunit F Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8K9Y3 0.0 659 71 2 443 3 nuoF NADH-quinone oxidoreductase subunit F Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57256 0.0 638 67 2 443 3 nuoF NADH-quinone oxidoreductase subunit F Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AU2 0.0 608 67 2 423 3 nuoF NADH-quinone oxidoreductase subunit F Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P56913 1.02e-136 402 49 3 414 3 nuoF2 NADH-quinone oxidoreductase subunit F 2 Rhizobium meliloti (strain 1021)
Q56222 5.92e-134 395 50 6 401 1 nqo1 NADH-quinone oxidoreductase subunit 1 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Q9XAQ9 8.7e-132 390 48 5 415 3 nuoF NADH-quinone oxidoreductase subunit F Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P9WIV7 1.58e-131 390 48 6 420 1 nuoF NADH-quinone oxidoreductase subunit F Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIV6 1.58e-131 390 48 6 420 3 nuoF NADH-quinone oxidoreductase subunit F Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P65568 1.58e-131 390 48 6 420 3 nuoF NADH-quinone oxidoreductase subunit F Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
O66841 6.46e-112 339 46 7 397 1 nuoF NADH-quinone oxidoreductase subunit F Aquifex aeolicus (strain VF5)
P29913 2.45e-109 332 43 4 408 1 nqo1 NADH-quinone oxidoreductase chain 1 Paracoccus denitrificans
Q68XY3 1.88e-108 330 44 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q92JB2 2.14e-108 330 44 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia conorii (strain ATCC VR-613 / Malish 7)
A8GQT6 3.06e-108 329 44 4 387 2 nuoF NADH-quinone oxidoreductase subunit F Rickettsia rickettsii (strain Sheila Smith)
Q9ZE33 4.92e-108 329 44 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia prowazekii (strain Madrid E)
A8F0M0 1.6e-107 327 44 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia massiliae (strain Mtu5)
Q46507 3.7e-107 329 41 5 404 1 hndC NADP-reducing hydrogenase subunit HndC Solidesulfovibrio fructosivorans
Q4UKA6 6.82e-107 326 44 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
O07948 3.45e-106 324 41 7 433 3 nuoF NADH-quinone oxidoreductase subunit F Rhodobacter capsulatus
Q1RHA0 5.3e-106 323 44 5 388 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia bellii (strain RML369-C)
A8GYE0 5.3e-106 323 44 5 388 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia bellii (strain OSU 85-389)
A8EXI1 2.33e-105 322 43 5 390 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia canadensis (strain McKiel)
Q0MQI4 1.93e-104 321 45 5 390 2 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Pongo pygmaeus
P25708 2.42e-104 321 45 5 390 1 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Bos taurus
Q0MQI6 3.07e-104 320 44 5 390 2 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Pan troglodytes
Q54I90 3.68e-104 321 43 6 404 2 ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Dictyostelium discoideum
Q91YT0 3.98e-104 320 44 5 395 1 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Mus musculus
O52682 4.31e-104 325 42 3 400 1 hydB Bifurcating [FeFe] hydrogenase beta subunit Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q0MQI5 5.11e-104 320 44 5 390 2 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Gorilla gorilla gorilla
Q8HXQ9 8.3e-104 319 44 5 390 2 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Macaca fascicularis
P49821 1.05e-103 319 44 5 390 1 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Homo sapiens
A8GM77 1.43e-103 317 43 4 387 3 nuoF NADH-quinone oxidoreductase subunit F Rickettsia akari (strain Hartford)
P24917 1.52e-103 320 45 5 383 2 nuo-51 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Q9FNN5 1.1e-100 312 42 5 399 1 At5g08530 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Arabidopsis thaliana
P56912 6.46e-100 308 43 5 380 3 nuoF1 NADH-quinone oxidoreductase subunit F 1 Rhizobium meliloti (strain 1021)
Q92406 1.52e-97 304 42 5 383 3 NUO51 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial Aspergillus niger
P22317 2.96e-73 244 39 8 332 1 hoxF NAD-reducing hydrogenase HoxS subunit alpha Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
O94500 5.21e-65 219 33 6 403 3 SPBC18E5.10 NADH-ubiquinone oxidoreductase 51 kDa subunit homolog SPBC18E5.10, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
H6LC32 2.54e-07 56 24 8 271 1 rnfC Na(+)-translocating ferredoxin:NAD(+) oxidoreductase complex subunit C Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1)
D5ARZ1 2.06e-05 50 23 9 271 3 rnfC Ion-translocating oxidoreductase complex subunit C Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
Q52716 2.06e-05 50 23 9 271 1 rnfC Ion-translocating oxidoreductase complex subunit C Rhodobacter capsulatus
A0A0H3AJC2 0.000177 47 34 2 84 3 rnfC Ion-translocating oxidoreductase complex subunit C Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q9KT88 0.000185 47 34 2 84 3 rnfC Ion-translocating oxidoreductase complex subunit C Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q9XDM9 0.000301 46 28 8 242 1 pduS Cobalamin reductase PduS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A8AH10 0.000312 47 28 2 129 3 rnfC Ion-translocating oxidoreductase complex subunit C Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
D8GR66 0.001 45 23 10 272 2 rnfC Proton-translocating ferredoxin:NAD(+) oxidoreductase complex subunit C Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_08460
Feature type CDS
Gene nuoF
Product NADH-quinone oxidoreductase subunit NuoF
Location 90913 - 92265 (strand: 1)
Length 1353 (nucleotides) / 450 (amino acids)

Contig

Accession ZDB_523
Length 257158 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1895
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit
PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1894 Energy production and conversion (C) C NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit (chain F)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00335 NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] Oxidative phosphorylation
Metabolic pathways		 NADH:quinone oxidoreductase, prokaryotes

Protein Sequence

MTVKTVCRTAETHPLTWRLRDDHQPVWLDEYRSKNGYAGAERALKGMAPDEITSLVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAKHLRHAIEEAKAAGLLGKNILGSGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPASSGVWGKPTCVNNVETLCNVPAILAHGKEWYIGLSEGKSTDAGTKLMGFSGRVKNPGVWELPFGTTAREILEDYAGGMRDGLTLKAWQPGGAGTDFLTQDHLDLPMDFEHIGKAGSRLGTALAMAVDNEINMVSLTRNLEEFFARESCGWCTPCRDGLPWSVKILRAIEKGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRDEFEAGIVQPVYGNVQTIAGIQPNLLKQRW

Flanking regions ( +/- flanking 50bp)

CACAGTCACGTTACGCCTGAAGCCATTGAAACGTTACTGGAGCAGTATCCATGACAGTGAAAACGGTTTGCCGTACTGCGGAAACGCATCCTCTCACCTGGCGGTTGCGCGACGACCATCAGCCGGTGTGGCTGGATGAATACCGCAGTAAAAACGGTTATGCGGGGGCGGAACGCGCCCTGAAAGGCATGGCACCGGATGAGATCACCAGTCTTGTCAAAGACGCGGGTCTGAAGGGCCGCGGAGGTGCGGGGTTCTCCACGGGTCTGAAGTGGAGCCTGATGCCGAAAGACGAGAGCATGAATATCCGTTACCTGCTGTGTAACGCCGACGAAATGGAACCGGGTACCTACAAAGACCGGCTCCTGATGGAACAACTGCCGCACCTGCTGGTGGAAGGGATGCTGATCAGCGCCTTCGCCCTGAAAGCATACCGGGGCTATATCTTCCTGCGCGGCGAGTACATTGAGGCAGCGAAACACCTGCGTCACGCCATTGAAGAAGCGAAAGCTGCCGGTCTGCTGGGGAAAAATATCCTCGGCAGCGGGTTTGATTTCGAACTGTTTGTGCACACCGGAGCCGGGCGTTATATCTGCGGGGAAGAAACCGCGCTGATTAACTCCCTGGAAGGCCGCCGCGCCAATCCGCGCTCCAAACCGCCGTTCCCGGCCAGTTCCGGGGTGTGGGGTAAACCGACCTGTGTCAACAACGTCGAAACCCTGTGTAACGTACCGGCGATTCTGGCACACGGCAAAGAGTGGTATATCGGTCTGAGTGAAGGCAAAAGTACCGATGCCGGTACCAAGCTGATGGGCTTTTCCGGCCGCGTGAAAAATCCGGGTGTCTGGGAACTGCCGTTCGGCACCACCGCCCGTGAAATCCTCGAGGATTACGCCGGGGGCATGCGCGACGGACTGACCTTAAAAGCCTGGCAGCCGGGTGGTGCGGGAACCGACTTTCTGACACAGGATCACCTTGATTTACCGATGGATTTCGAGCATATCGGCAAAGCGGGCAGCCGTCTGGGAACGGCGCTGGCGATGGCGGTGGATAATGAAATCAACATGGTGTCACTGACCCGTAACCTCGAAGAATTTTTTGCCCGCGAATCCTGCGGCTGGTGTACACCGTGCCGTGACGGATTGCCGTGGAGCGTGAAAATTCTGCGCGCAATAGAAAAAGGGGAAGGCCAGCCGGGAGACATTGAGACATTAGAGCAATTATGTCGTTTCCTGGGACCGGGTAAAACCTTCTGCGCACACGCGCCGGGCGCGGTAGAGCCGTTACAGAGTGCGATCAAATATTTCCGTGATGAATTTGAAGCGGGGATCGTACAGCCGGTTTACGGCAACGTGCAGACCATTGCCGGGATCCAGCCGAACCTGCTGAAGCAGCGCTGGTGATCCCTTACGGATTTTCGTTTAACGCCTGCATAGCAGGCCTTTTGGAAGCA