COG1894


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1894, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit (chain F)
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG1894 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1895 FBDBKF_14145 24720 26072 -1 nuoF NADH-quinone oxidoreductase subunit NuoF Morganella morganii S1
1 group_1895 EHELCC_08135 90913 92265 1 nuoF NADH-quinone oxidoreductase subunit NuoF Morganella morganii S2
2 group_1895 NLDBIP_08460 90913 92265 1 nuoF NADH-quinone oxidoreductase subunit NuoF Morganella morganii S4
3 group_1895 LHKJJB_05805 164894 166246 -1 nuoF NADH-quinone oxidoreductase subunit NuoF Morganella morganii S3
4 group_1895 HKOGLL_05110 75504 76856 1 nuoF NADH-quinone oxidoreductase subunit NuoF Morganella morganii S5
5 group_1895 F4V73_RS02790 588293 589645 1 nuoF NADH-quinone oxidoreductase subunit NuoF Morganella psychrotolerans
6 group_1895 PMI_RS08625 1883715 1885079 -1 nuoF NADH-quinone oxidoreductase subunit NuoF Proteus mirabilis HI4320