Homologs in group_2933

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14400 FBDBKF_14400 100.0 Morganella morganii S1 dsdC DNA-binding transcriptional regulator DsdC
EHELCC_07880 EHELCC_07880 100.0 Morganella morganii S2 dsdC DNA-binding transcriptional regulator DsdC
LHKJJB_06060 LHKJJB_06060 100.0 Morganella morganii S3 dsdC DNA-binding transcriptional regulator DsdC
HKOGLL_04855 HKOGLL_04855 100.0 Morganella morganii S5 dsdC DNA-binding transcriptional regulator DsdC
PMI_RS00890 PMI_RS00890 65.0 Proteus mirabilis HI4320 dsdC DNA-binding transcriptional regulator DsdC

Distribution of the homologs in the orthogroup group_2933

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2933

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P46068 6.46e-135 388 59 1 304 2 dsdC HTH-type transcriptional regulator DsdC Escherichia coli (strain K12)
Q57083 1.86e-36 135 31 8 300 1 perR HTH-type transcriptional regulator PerR Escherichia coli (strain K12)
P0A9F6 7.32e-36 134 28 1 293 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 7.32e-36 134 28 1 293 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 7.32e-36 134 28 1 293 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
P52660 9.2e-34 128 29 5 297 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
P24734 5.39e-30 118 30 5 292 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P05051 1.44e-28 114 31 7 299 3 ampR HTH-type transcriptional activator AmpR Enterobacter cloacae
P52658 2.88e-28 114 29 7 290 3 ampR HTH-type transcriptional activator AmpR Citrobacter koseri
O69772 1.18e-26 109 32 7 296 3 ampR HTH-type transcriptional activator AmpR Providencia stuartii
P45099 1.5e-26 109 28 6 300 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P55576 2.07e-26 108 31 5 262 3 NGR_a02420 Uncharacterized HTH-type transcriptional regulator y4mQ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P12529 2.52e-24 103 29 3 258 1 ampR HTH-type transcriptional activator AmpR Citrobacter freundii
P34818 6.31e-24 102 27 7 298 3 trpI HTH-type transcriptional regulator TrpI Pseudomonas syringae pv. syringae
P14145 1.23e-23 101 29 6 292 3 ampR HTH-type transcriptional activator AmpR Rhodobacter capsulatus
P52683 8.05e-23 99 27 6 292 3 smeR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Serratia marcescens
P52676 5.55e-22 97 26 6 291 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
P11720 1.49e-21 95 27 4 295 1 trpI HTH-type transcriptional regulator TrpI Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P45461 3.63e-21 94 27 6 290 3 ampR HTH-type transcriptional activator AmpR Yersinia enterocolitica
P42507 3.77e-19 89 27 7 293 3 hvrB AhcY transcriptional activator HvrB Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P75836 2.66e-18 87 28 6 248 3 ycaN Uncharacterized HTH-type transcriptional regulator YcaN Escherichia coli (strain K12)
P76250 5.16e-15 77 29 3 193 1 dmlR HTH-type transcriptional regulator DmlR Escherichia coli (strain K12)
A0A0H2ZDG9 6.1e-15 77 27 5 262 3 PA14_22550 HTH-type transcriptional repressor PA14_22550 Pseudomonas aeruginosa (strain UCBPP-PA14)
P30864 1.77e-14 76 23 6 298 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
P37641 1.25e-13 73 28 1 169 3 yhjC Uncharacterized HTH-type transcriptional regulator YhjC Escherichia coli (strain K12)
P42722 2.81e-12 69 26 8 252 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P67662 2.98e-12 69 25 2 175 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli (strain K12)
P67663 2.98e-12 69 25 2 175 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P67664 2.98e-12 69 25 2 175 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O157:H7
P52689 7.52e-12 68 25 2 194 3 ltrA Probable HTH-type transcriptional regulator LtrA Klebsiella pneumoniae
Q9JXW7 1.12e-11 67 25 4 214 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q5N5I5 4.52e-11 66 33 3 129 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 4.52e-11 66 33 3 129 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q9JPU9 6.65e-11 65 24 5 237 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
P52696 7.98e-11 65 24 6 289 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
Q06610 1.3e-10 64 34 4 131 3 rbcR RuBisCO operon transcriptional regulator Acidithiobacillus ferrooxidans
Q8KA72 3.98e-10 63 23 3 180 3 metR HTH-type transcriptional regulator MetR Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P96725 4.34e-10 63 27 5 201 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
P0ACR8 4.5e-10 63 28 2 178 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 4.5e-10 63 28 2 178 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
P94501 4.91e-10 63 28 2 167 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
P27111 8.22e-10 62 31 6 171 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
Q1R6S1 1.35e-09 62 25 4 179 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain UTI89 / UPEC)
Q8FDH0 1.35e-09 62 25 4 179 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P72131 1.38e-09 61 25 8 288 1 ptxR HTH-type transcriptional regulator PtxR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8X4M5 1.53e-09 61 31 6 171 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
P52595 1.62e-09 61 25 13 298 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
O34701 1.69e-09 61 29 4 169 3 yoaU Uncharacterized HTH-type transcriptional regulator YoaU Bacillus subtilis (strain 168)
P45463 2.09e-09 61 26 6 184 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain K12)
Q0TD46 2.13e-09 61 25 4 179 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A5F9F9 2.81e-09 60 31 1 124 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0C6D1 2.84e-09 60 31 1 124 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q8XBK9 5.45e-09 60 26 6 184 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O157:H7
P39592 1.26e-08 58 22 5 245 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
P05827 2.04e-08 58 30 1 126 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
P70785 2.14e-08 58 30 4 189 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P77333 2.75e-08 57 25 9 272 1 pgrR HTH-type transcriptional regulator PgrR Escherichia coli (strain K12)
P25544 2.92e-08 57 37 1 85 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
Q04778 3.71e-08 57 23 6 246 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P0A2Q2 4.25e-08 57 29 1 126 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 4.25e-08 57 29 1 126 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
P45349 5.56e-08 57 25 4 174 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P77309 5.75e-08 56 25 4 201 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
Q55459 6.69e-08 56 31 5 129 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P52693 9.29e-08 56 31 5 148 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P52669 1.24e-07 55 29 6 178 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P0A9G1 2.08e-07 55 24 2 170 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 2.08e-07 55 24 2 170 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 2.08e-07 55 24 2 170 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
O34827 2.53e-07 54 26 2 134 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
P33634 2.55e-07 54 27 3 173 3 yfiE Uncharacterized HTH-type transcriptional regulator YfiE Escherichia coli (strain K12)
P25545 2.68e-07 55 28 3 145 3 cbbR HTH-type transcriptional regulator CbbR Xanthobacter flavus
P55181 3.29e-07 54 33 3 132 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
P0ACR2 3.68e-07 54 51 0 56 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli (strain K12)
P0ACR3 3.68e-07 54 51 0 56 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli O157:H7
P94387 3.76e-07 54 27 7 168 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
P39127 4.37e-07 54 23 11 294 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
P77171 5.88e-07 53 29 4 174 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P0A2Q4 6.03e-07 53 23 2 170 3 metR HTH-type transcriptional regulator MetR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q5 6.03e-07 53 23 2 170 3 metR HTH-type transcriptional regulator MetR Salmonella typhi
P96194 6.22e-07 51 39 3 97 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
P77700 7.29e-07 53 36 1 84 1 yahB Uncharacterized HTH-type transcriptional regulator YahB Escherichia coli (strain K12)
Q01610 7.56e-07 53 38 0 77 3 PA2220 Putative transcriptional regulator Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A7Z5E4 8.79e-07 53 29 5 167 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
P71025 1.84e-06 52 30 3 126 3 czcR HTH-type transcriptional regulator CzcR Bacillus subtilis (strain 168)
Q9X5P2 2.09e-06 52 29 3 131 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
A0T0V5 2.92e-06 51 27 7 180 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
P44821 3.02e-06 51 24 3 145 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O33812 3.38e-06 51 20 8 289 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
O34685 3.51e-06 51 30 1 122 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
O32255 4.2e-06 51 32 5 128 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
Q57748 4.39e-06 51 25 1 134 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q44311 5.44e-06 50 24 7 215 3 soxR HTH-type transcriptional regulator SoxR Arthrobacter sp. (strain TE1826)
P20668 6.67e-06 50 27 6 193 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
Q85G62 7.67e-06 50 30 4 124 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
O32186 7.83e-06 50 30 2 130 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
P77746 8.37e-06 50 31 1 100 2 ybdO Uncharacterized HTH-type transcriptional regulator YbdO Escherichia coli (strain K12)
P39647 8.8e-06 50 22 10 296 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
B1JQ39 8.82e-06 50 31 0 115 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 8.82e-06 50 31 0 115 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 8.82e-06 50 31 0 115 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 8.82e-06 50 31 0 115 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 8.82e-06 50 31 0 115 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 8.82e-06 50 31 0 115 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 8.82e-06 50 31 0 115 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 8.82e-06 50 31 0 115 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 8.82e-06 50 31 0 115 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
P0ACR4 1.21e-05 49 24 4 173 1 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli (strain K12)
P0ACR5 1.21e-05 49 24 4 173 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACR6 1.21e-05 49 24 4 173 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O157:H7
P56885 1.32e-05 49 32 4 144 3 cbbR HTH-type transcriptional regulator CbbR Sinorhizobium medicae (strain WSM419)
P77744 1.4e-05 49 24 4 172 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
A1JI47 1.51e-05 49 30 0 115 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B4E8V9 1.63e-05 49 29 3 131 1 cysB HTH-type transcriptional regulator CysB Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
O35038 2.75e-05 48 30 5 139 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
Q9HWH8 3.26e-05 48 30 0 131 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O87883 3.45e-05 47 30 1 123 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
P58332 4.21e-05 48 31 4 148 3 cbbR HTH-type transcriptional regulator CbbR Rhizobium meliloti (strain 1021)
Q1R4H3 5.01e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 5.01e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 5.01e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 5.01e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 5.01e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
B2TU26 5.11e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B5FN59 5.13e-05 47 31 0 99 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
B4TNR5 5.18e-05 47 31 0 99 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
B7NU32 5.2e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7NF72 5.25e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q329U3 5.3e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 5.3e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 5.3e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 5.3e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 5.3e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 5.3e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 5.3e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
B4SYF7 5.37e-05 47 31 0 99 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
Q3YVK2 5.39e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 5.39e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 5.39e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 5.39e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 5.39e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 5.39e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 5.39e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 5.39e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 5.39e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 5.39e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7UMM1 5.39e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
P0A2Q0 5.52e-05 47 31 0 99 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 5.52e-05 47 31 0 99 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 5.52e-05 47 31 0 99 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 5.52e-05 47 31 0 99 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 5.52e-05 47 31 0 99 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 5.52e-05 47 31 0 99 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 5.52e-05 47 31 0 99 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 5.52e-05 47 31 0 99 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
B7LUJ5 5.54e-05 47 44 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
P52665 0.000123 45 42 0 64 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
P52659 0.000127 46 29 6 178 3 abaB HTH-type transcriptional regulator AbaB Streptomyces antibioticus
P0ACR0 0.000199 46 44 0 59 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 0.000199 46 44 0 59 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
Q8FK66 0.000203 46 44 0 59 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 0.000203 46 44 0 59 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q1RF30 0.000212 46 44 0 59 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 0.000212 46 44 0 59 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
Q1XDT2 0.000263 45 25 7 185 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
B5XUC3 0.000285 45 27 6 179 3 argP HTH-type transcriptional regulator ArgP Klebsiella pneumoniae (strain 342)
A6TDS6 0.000296 45 27 6 179 3 argP HTH-type transcriptional regulator ArgP Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
P51205 0.000307 45 25 7 185 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
P52666 0.000358 45 29 3 144 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
Q9I6Z9 0.000374 45 27 3 132 3 bauR HTH-type transcriptional activator BauR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8YQ82 0.000743 44 29 6 173 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
O78432 0.000765 44 28 3 124 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
P03030 0.000855 44 26 2 124 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
Q3MCB5 0.001 44 29 6 173 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_08205
Feature type CDS
Gene dsdC
Product DNA-binding transcriptional regulator DsdC
Location 34242 - 35207 (strand: -1)
Length 966 (nucleotides) / 321 (amino acids)

Contig

Accession ZDB_523
Length 257158 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2933
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K13636 LysR family transcriptional regulator, D-serine deaminase activator - -

Protein Sequence

MSSDINRYEPSGSLRRNKRVSGHQLSRLHTFEAAARHCSFALAAQELALTPGAVSHRINTLESELGFRLFERFHRRVELTSDGERIYWALRKNLDDINQEIIDIKNQEISGELTVYSRPSLAQCWLIPGIADFTDQYPAIQLNLLTGNDDVNFRGYGIDIAIYYDDISRPNLYCEDLMSESIVPVCSPEYAKRYELHNNIHQLRNCMLLHDRQAWSSNSDYDEWKAWSEHYQPDLFPHRRNLCFDRSDLAIVAAMNHAGVAMGRKQLVEKRIQSRMLVMPFGDISLTCSQRYYFAMLGDRRNPKADIFISWLKQKVTKTLP

Flanking regions ( +/- flanking 50bp)

GCGGTATTCTTTATGCAAAAAACATCCTGCGTAATAAAAAGAGAGCGGCTATGTCATCGGATATAAACCGGTATGAACCATCGGGATCCCTGCGGCGTAACAAGCGGGTATCGGGTCATCAGCTGTCACGTCTGCATACTTTCGAAGCGGCGGCACGGCACTGTTCATTTGCTCTGGCAGCACAGGAACTGGCGCTGACTCCCGGCGCGGTAAGCCACCGTATCAATACCCTCGAAAGTGAACTGGGTTTCCGGTTATTTGAGCGTTTTCACCGGCGGGTTGAACTCACATCAGACGGTGAACGCATCTACTGGGCATTACGGAAAAACCTGGATGACATTAACCAGGAAATCATTGATATCAAAAATCAGGAAATTTCCGGCGAGTTAACCGTCTATTCCCGCCCGTCACTGGCGCAATGCTGGCTGATTCCGGGGATCGCGGATTTTACGGATCAATACCCTGCTATTCAGCTGAATCTGTTAACCGGTAATGATGATGTCAATTTCCGCGGCTATGGCATTGATATCGCAATTTATTACGATGATATATCAAGACCTAATCTCTATTGCGAGGATTTGATGTCAGAATCAATCGTACCGGTTTGCAGCCCGGAATATGCGAAACGTTATGAGCTGCATAACAATATTCATCAGCTCAGGAACTGCATGTTGTTACATGACCGCCAGGCATGGAGCAGTAACTCAGATTACGACGAATGGAAAGCCTGGAGTGAACATTATCAGCCTGATTTGTTCCCTCACCGGCGCAATCTGTGTTTTGATCGTTCAGATTTGGCGATTGTCGCGGCAATGAATCATGCCGGTGTCGCGATGGGACGTAAACAACTGGTGGAAAAACGTATTCAGAGCAGGATGCTGGTGATGCCCTTCGGCGATATTTCACTGACATGCAGTCAGCGATATTACTTTGCTATGCTCGGAGACAGGCGTAATCCGAAAGCAGATATCTTTATTTCGTGGCTGAAACAAAAGGTTACGAAGACATTACCATAAATACAGCCGCCCCCCGGGGGCCCGCAGGTAATACGTTCAATCTGCACATC