Orthogroup:group_2933


Homologs in group_2933

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14400 FBDBKF_14400 Morganella morganii S1 dsdC DNA-binding transcriptional regulator DsdC
EHELCC_07880 EHELCC_07880 Morganella morganii S2 dsdC DNA-binding transcriptional regulator DsdC
NLDBIP_08205 NLDBIP_08205 Morganella morganii S4 dsdC DNA-binding transcriptional regulator DsdC
LHKJJB_06060 LHKJJB_06060 Morganella morganii S3 dsdC DNA-binding transcriptional regulator DsdC
HKOGLL_04855 HKOGLL_04855 Morganella morganii S5 dsdC DNA-binding transcriptional regulator DsdC
PMI_RS00890 PMI_RS00890 Proteus mirabilis HI4320 dsdC DNA-binding transcriptional regulator DsdC

Distribution of group_2933 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2933 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2933

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2933.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dsdC 6

Product

# Product Occurence
1 DNA-binding transcriptional regulator DsdC 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0583 6 K Transcription (K) DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K13636 6 LysR family transcriptional regulator, D-serine deaminase activator - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00126 6 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 6 LysR substrate binding domain

Annotations of the 217 SwissProt hits

Annotation Number of occurrences
AhcY transcriptional activator HvrB 1
Carbapenem-hydrolyzing beta-lactamase transcriptional activator 2
Glycine cleavage system transcriptional activator 3
Glycine cleavage system transcriptional activator homolog 1
HTH-type transcriptional activator AaeR 3
HTH-type transcriptional activator AllS 10
HTH-type transcriptional activator AmpR 7
HTH-type transcriptional activator BauR 1
HTH-type transcriptional activator CmpR 3
HTH-type transcriptional activator IlvY 3
HTH-type transcriptional activator TtdR 5
HTH-type transcriptional regulator AbaB 1
HTH-type transcriptional regulator AbgR 1
HTH-type transcriptional regulator AceR 1
HTH-type transcriptional regulator AlsR 1
HTH-type transcriptional regulator ArgP 2
HTH-type transcriptional regulator BbuR 1
HTH-type transcriptional regulator BenM 1
HTH-type transcriptional regulator BlaA 1
HTH-type transcriptional regulator BsdA 1
HTH-type transcriptional regulator BudR 1
HTH-type transcriptional regulator BudR (Fragment) 1
HTH-type transcriptional regulator CbbR 4
HTH-type transcriptional regulator CfxR 1
HTH-type transcriptional regulator CitR 1
HTH-type transcriptional regulator CrgA 2
HTH-type transcriptional regulator CynR 2
HTH-type transcriptional regulator CysB 5
HTH-type transcriptional regulator CysB (Fragment) 1
HTH-type transcriptional regulator CysL 1
HTH-type transcriptional regulator CzcR 7
HTH-type transcriptional regulator DgdR 1
HTH-type transcriptional regulator DmlR 1
HTH-type transcriptional regulator DsdC 1
HTH-type transcriptional regulator GltR 1
HTH-type transcriptional regulator HdfR 48
HTH-type transcriptional regulator IlvR 1
HTH-type transcriptional regulator IlvY 1
HTH-type transcriptional regulator MetR 7
HTH-type transcriptional regulator NmoR 1
HTH-type transcriptional regulator PecT 1
HTH-type transcriptional regulator PerR 1
HTH-type transcriptional regulator PgrR 1
HTH-type transcriptional regulator PtxR 1
HTH-type transcriptional regulator ShiR 1
HTH-type transcriptional regulator SoxR 1
HTH-type transcriptional regulator TrpI 2
HTH-type transcriptional regulator TtuA 2
HTH-type transcriptional regulator YhaJ 1
HTH-type transcriptional regulator YofA 2
HTH-type transcriptional regulator YtlI 1
HTH-type transcriptional regulator cbl 1
HTH-type transcriptional repressor PA14_22550 1
Iron-regulated virulence regulatory protein IrgB 2
Nitrogen assimilation regulatory protein nac 1
Probable HTH-type transcriptional regulator LrrA 1
Probable HTH-type transcriptional regulator LtrA 1
Probable HTH-type transcriptional regulator SinR 1
Probable HTH-type transcriptional regulator YhaJ 1
Probable RuBisCO transcriptional regulator 15
Probable hydrogen peroxide-inducible genes activator 1
Probable hydrogen peroxide-inducible genes activator (Fragment) 1
Probable nitrogen assimilation transcriptional activator 1
Putative transcriptional regulator 1
RuBisCO operon transcriptional regulator 2
Transcriptional activator protein LysR 1
Transcriptional activator protein NhaR 2
Transcriptional dual regulator GltC 1
Uncharacterized HTH-type transcriptional regulator HI_1364 1
Uncharacterized HTH-type transcriptional regulator MJ0300 1
Uncharacterized HTH-type transcriptional regulator YafC 1
Uncharacterized HTH-type transcriptional regulator YahB 1
Uncharacterized HTH-type transcriptional regulator YbdO 1
Uncharacterized HTH-type transcriptional regulator YbhD 1
Uncharacterized HTH-type transcriptional regulator YcaN 1
Uncharacterized HTH-type transcriptional regulator YcgK 1
Uncharacterized HTH-type transcriptional regulator YdcI 1
Uncharacterized HTH-type transcriptional regulator YdhB 2
Uncharacterized HTH-type transcriptional regulator YeiE 3
Uncharacterized HTH-type transcriptional regulator YfeR 2
Uncharacterized HTH-type transcriptional regulator YfiE 1
Uncharacterized HTH-type transcriptional regulator YhjC 1
Uncharacterized HTH-type transcriptional regulator YiaU 1
Uncharacterized HTH-type transcriptional regulator YkuM 1
Uncharacterized HTH-type transcriptional regulator YneJ 1
Uncharacterized HTH-type transcriptional regulator YoaU 1
Uncharacterized HTH-type transcriptional regulator YraN 1
Uncharacterized HTH-type transcriptional regulator YusT 1
Uncharacterized HTH-type transcriptional regulator YvbU 1
Uncharacterized HTH-type transcriptional regulator YwbI 1
Uncharacterized HTH-type transcriptional regulator YwqM 1
Uncharacterized HTH-type transcriptional regulator YxjO 1
Uncharacterized HTH-type transcriptional regulator YybE 1
Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region 1
Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) 1
Uncharacterized HTH-type transcriptional regulator y4mQ 1

Protein length

Min length 314
Max length 321
Mean length (sd) 319.8 (2.9)
Median length 321.0

Protein length distribution