Homologs in group_2933

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14400 FBDBKF_14400 65.0 Morganella morganii S1 dsdC DNA-binding transcriptional regulator DsdC
EHELCC_07880 EHELCC_07880 65.0 Morganella morganii S2 dsdC DNA-binding transcriptional regulator DsdC
NLDBIP_08205 NLDBIP_08205 65.0 Morganella morganii S4 dsdC DNA-binding transcriptional regulator DsdC
LHKJJB_06060 LHKJJB_06060 65.0 Morganella morganii S3 dsdC DNA-binding transcriptional regulator DsdC
HKOGLL_04855 HKOGLL_04855 65.0 Morganella morganii S5 dsdC DNA-binding transcriptional regulator DsdC

Distribution of the homologs in the orthogroup group_2933

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2933

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P46068 7.44e-137 393 60 1 302 2 dsdC HTH-type transcriptional regulator DsdC Escherichia coli (strain K12)
P0A9F6 3.73e-45 158 31 4 297 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 3.73e-45 158 31 4 297 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 3.73e-45 158 31 4 297 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
Q57083 6.47e-39 142 32 6 302 1 perR HTH-type transcriptional regulator PerR Escherichia coli (strain K12)
P52660 1.36e-37 138 29 4 294 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
P45099 8.09e-35 131 30 6 308 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P24734 3.21e-34 129 33 4 256 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P52658 5.35e-33 126 30 6 297 3 ampR HTH-type transcriptional activator AmpR Citrobacter koseri
P55576 7.81e-29 115 29 6 299 3 NGR_a02420 Uncharacterized HTH-type transcriptional regulator y4mQ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P14145 2.21e-28 114 28 5 289 3 ampR HTH-type transcriptional activator AmpR Rhodobacter capsulatus
P52683 6.34e-28 112 28 6 292 3 smeR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Serratia marcescens
P34818 3.68e-26 108 27 5 294 3 trpI HTH-type transcriptional regulator TrpI Pseudomonas syringae pv. syringae
P52676 1.05e-25 107 26 5 291 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
P12529 4.79e-25 105 29 3 258 1 ampR HTH-type transcriptional activator AmpR Citrobacter freundii
P05051 6.65e-25 104 30 4 265 3 ampR HTH-type transcriptional activator AmpR Enterobacter cloacae
O69772 8.06e-25 104 28 4 292 3 ampR HTH-type transcriptional activator AmpR Providencia stuartii
P11720 5.52e-24 102 26 4 291 1 trpI HTH-type transcriptional regulator TrpI Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P42507 8.62e-21 93 27 9 298 3 hvrB AhcY transcriptional activator HvrB Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P75836 1.74e-20 92 33 4 190 3 ycaN Uncharacterized HTH-type transcriptional regulator YcaN Escherichia coli (strain K12)
P45461 1.85e-19 89 28 6 266 3 ampR HTH-type transcriptional activator AmpR Yersinia enterocolitica
P76250 1.42e-18 87 32 3 185 1 dmlR HTH-type transcriptional regulator DmlR Escherichia coli (strain K12)
A0A0H2ZDG9 3.21e-17 84 25 4 293 3 PA14_22550 HTH-type transcriptional repressor PA14_22550 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q9JXW7 4.15e-17 83 30 4 190 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JPU9 5.05e-17 83 26 9 290 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
P30864 1.5e-16 82 25 6 286 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
P37641 2.65e-14 75 31 2 158 3 yhjC Uncharacterized HTH-type transcriptional regulator YhjC Escherichia coli (strain K12)
Q5N5I5 4.6e-14 75 34 3 129 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 4.6e-14 75 34 3 129 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P52689 1.07e-13 73 27 1 158 3 ltrA Probable HTH-type transcriptional regulator LtrA Klebsiella pneumoniae
P0ACR8 4.7e-13 72 28 4 170 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 4.7e-13 72 28 4 170 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
P72131 5.45e-13 71 24 5 303 1 ptxR HTH-type transcriptional regulator PtxR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P96725 8.23e-13 70 26 6 232 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
P67662 8.39e-13 71 28 2 166 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli (strain K12)
P67663 8.39e-13 71 28 2 166 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P67664 8.39e-13 71 28 2 166 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O157:H7
P27111 1.85e-12 70 29 6 198 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
Q8X4M5 2.03e-12 70 29 6 203 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
P42722 7.5e-12 68 27 4 181 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P25544 2.12e-11 67 23 9 288 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
A0T0G2 2.76e-11 66 32 7 179 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
O34827 4.04e-11 66 30 5 180 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
Q06610 5.06e-11 65 34 4 131 3 rbcR RuBisCO operon transcriptional regulator Acidithiobacillus ferrooxidans
P52595 9.99e-11 65 25 15 304 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
Q0TD46 1.24e-10 64 25 6 207 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P45463 1.27e-10 64 25 6 207 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain K12)
Q1R6S1 1.82e-10 64 25 6 207 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain UTI89 / UPEC)
Q8FDH0 1.82e-10 64 25 6 207 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8XBK9 2.52e-10 63 25 6 207 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O157:H7
P94501 3.73e-10 63 27 3 193 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
Q9X5P2 4.3e-10 63 29 3 131 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
Q55459 8.54e-10 62 32 6 149 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P77333 9.24e-10 62 22 8 303 1 pgrR HTH-type transcriptional regulator PgrR Escherichia coli (strain K12)
P0A2Q2 1.19e-09 61 32 2 118 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 1.19e-09 61 32 2 118 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
A0T0V5 1.49e-09 61 30 7 182 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
P0C6D1 1.55e-09 61 28 3 173 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P55181 1.65e-09 61 30 7 168 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
A5F9F9 1.78e-09 61 28 3 173 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P71025 2.65e-09 60 30 3 126 3 czcR HTH-type transcriptional regulator CzcR Bacillus subtilis (strain 168)
P05827 2.69e-09 60 31 2 118 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
P77309 1.09e-08 58 27 0 131 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
P44821 1.18e-08 58 30 3 135 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8KA72 1.31e-08 58 32 1 121 3 metR HTH-type transcriptional regulator MetR Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P96194 1.43e-08 56 40 3 97 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
P39592 1.56e-08 58 22 5 256 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
O34701 1.66e-08 58 28 4 166 3 yoaU Uncharacterized HTH-type transcriptional regulator YoaU Bacillus subtilis (strain 168)
A0R8S0 1.87e-08 58 29 3 138 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis (strain Al Hakam)
P52693 1.88e-08 58 33 4 139 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P48271 2.02e-08 58 34 3 126 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
P45349 2.65e-08 57 25 4 170 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q01610 3.43e-08 57 30 5 176 3 PA2220 Putative transcriptional regulator Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q63H01 3.56e-08 57 29 3 127 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ZK / E33L)
Q73EY2 3.56e-08 57 29 3 127 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 10987 / NRS 248)
P52696 3.72e-08 57 26 1 125 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
Q6HPH4 3.8e-08 57 29 3 127 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis subsp. konkukian (strain 97-27)
Q81IX0 3.98e-08 57 29 3 127 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q81VJ1 4.06e-08 57 29 3 127 3 czcR HTH-type transcriptional regulator CzcR Bacillus anthracis
B4E8V9 8.42e-08 56 28 3 128 1 cysB HTH-type transcriptional regulator CysB Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
P77171 1e-07 56 28 3 179 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P20668 1.08e-07 55 29 4 176 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
O34685 1.36e-07 55 28 1 122 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
P0A9G1 2.04e-07 55 24 4 215 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 2.04e-07 55 24 4 215 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 2.04e-07 55 24 4 215 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
Q04778 2.43e-07 55 28 2 144 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P77700 2.73e-07 54 40 1 84 1 yahB Uncharacterized HTH-type transcriptional regulator YahB Escherichia coli (strain K12)
P45105 3.05e-07 54 25 9 247 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P39647 3.12e-07 54 22 9 297 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
Q85G62 3.27e-07 54 29 2 125 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
P0ACR4 4.02e-07 54 23 9 268 1 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli (strain K12)
P0ACR5 4.02e-07 54 23 9 268 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACR6 4.02e-07 54 23 9 268 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O157:H7
P52669 4.13e-07 54 26 6 184 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P0A2Q4 4.78e-07 53 24 4 215 3 metR HTH-type transcriptional regulator MetR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q5 4.78e-07 53 24 4 215 3 metR HTH-type transcriptional regulator MetR Salmonella typhi
A7Z5E4 5.5e-07 53 30 2 127 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
Q9HWH8 5.69e-07 53 24 2 185 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P77744 5.89e-07 53 24 4 173 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
Q8YQ82 7.46e-07 53 29 2 125 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P0ACR2 8.03e-07 53 43 1 65 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli (strain K12)
P0ACR3 8.03e-07 53 43 1 65 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli O157:H7
Q6B936 9.51e-07 53 32 4 133 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
O32255 9.82e-07 53 30 5 129 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
P73123 1.05e-06 53 30 5 130 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P94387 1.07e-06 53 26 6 157 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
Q3MCB5 1.08e-06 53 29 2 125 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
P25545 1.44e-06 52 27 2 120 3 cbbR HTH-type transcriptional regulator CbbR Xanthobacter flavus
O78432 1.84e-06 52 29 2 124 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
P52666 1.99e-06 52 30 2 128 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
O19892 2.13e-06 52 29 3 126 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
Q1XDT2 2.72e-06 52 30 4 126 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
P51205 2.79e-06 51 26 6 180 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
P0ACR0 3.04e-06 51 25 12 267 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 3.04e-06 51 25 12 267 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
B2TU26 3.83e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1R4H3 3.94e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 3.94e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 3.94e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 3.94e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 3.94e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
O07906 4.03e-06 51 27 1 111 3 yraN Uncharacterized HTH-type transcriptional regulator YraN Bacillus subtilis (strain 168)
Q329U3 4.05e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 4.05e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 4.05e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 4.05e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 4.05e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 4.05e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 4.05e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
Q3YVK2 4.09e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 4.09e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 4.09e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 4.09e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 4.09e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 4.09e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 4.09e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 4.09e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 4.09e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 4.09e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7NU32 4.09e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7UMM1 4.09e-06 51 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B7NF72 4.24e-06 50 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q57748 4.43e-06 51 23 1 150 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
B7LUJ5 4.61e-06 50 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q44311 4.75e-06 50 26 3 155 3 soxR HTH-type transcriptional regulator SoxR Arthrobacter sp. (strain TE1826)
B4TNR5 5.16e-06 50 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
B4SYF7 5.35e-06 50 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
P0A2Q0 5.65e-06 50 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 5.65e-06 50 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 5.65e-06 50 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 5.65e-06 50 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 5.65e-06 50 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 5.65e-06 50 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 5.65e-06 50 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 5.65e-06 50 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
B5FN59 5.87e-06 50 47 0 59 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
Q8FK66 6.23e-06 50 25 12 267 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 6.23e-06 50 25 12 267 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q1RF30 6.46e-06 50 25 12 267 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 6.46e-06 50 25 12 267 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
P52665 9.89e-06 48 40 0 64 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
P77746 1.02e-05 50 31 1 105 2 ybdO Uncharacterized HTH-type transcriptional regulator YbdO Escherichia coli (strain K12)
O33812 1.04e-05 49 28 2 114 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
B1JQ39 1.14e-05 49 49 0 59 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 1.14e-05 49 49 0 59 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 1.14e-05 49 49 0 59 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 1.14e-05 49 49 0 59 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 1.14e-05 49 49 0 59 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 1.14e-05 49 49 0 59 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 1.14e-05 49 49 0 59 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 1.14e-05 49 49 0 59 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 1.14e-05 49 49 0 59 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
P0A9F3 1.19e-05 50 23 9 247 3 cysB HTH-type transcriptional regulator CysB Escherichia coli (strain K12)
P0A9F4 1.19e-05 50 23 9 247 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F5 1.19e-05 50 23 9 247 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O157:H7
A1JI47 1.2e-05 49 49 0 59 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q47083 1.27e-05 49 28 2 120 1 cbl HTH-type transcriptional regulator cbl Escherichia coli (strain K12)
P39127 1.43e-05 49 31 1 109 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
P49518 1.55e-05 49 28 8 189 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
P56885 1.82e-05 49 30 5 149 3 cbbR HTH-type transcriptional regulator CbbR Sinorhizobium medicae (strain WSM419)
O35038 1.82e-05 49 32 5 139 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
P52670 1.94e-05 48 27 8 194 3 ilvR HTH-type transcriptional regulator IlvR Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
A4QH19 2.33e-05 48 30 1 120 1 shiR HTH-type transcriptional regulator ShiR Corynebacterium glutamicum (strain R)
P33634 2.42e-05 48 23 3 173 3 yfiE Uncharacterized HTH-type transcriptional regulator YfiE Escherichia coli (strain K12)
P0DUU5 2.98e-05 48 25 3 167 1 aceR HTH-type transcriptional regulator AceR Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
O87883 3.7e-05 47 28 2 128 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
P0A9G3 4.47e-05 48 45 1 64 3 nhaR Transcriptional activator protein NhaR Shigella flexneri
P0A9G2 4.47e-05 48 45 1 64 1 nhaR Transcriptional activator protein NhaR Escherichia coli (strain K12)
Q47005 5.94e-05 47 23 3 150 3 nac Nitrogen assimilation regulatory protein nac Escherichia coli (strain K12)
P52691 6.72e-05 47 30 2 124 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P37499 8.07e-05 47 29 2 121 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
Q765S2 8.65e-05 47 33 4 121 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
A2CI69 0.000105 47 25 8 188 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
O06703 0.00011 47 25 6 191 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P58332 0.00012 46 30 5 142 3 cbbR HTH-type transcriptional regulator CbbR Rhizobium meliloti (strain 1021)
P16931 0.000128 46 23 0 126 3 dgdR HTH-type transcriptional regulator DgdR Burkholderia cepacia
O68014 0.000135 46 34 0 78 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P43011 0.000147 46 22 1 154 3 HI_1364 Uncharacterized HTH-type transcriptional regulator HI_1364 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P37459 0.000154 46 27 7 170 3 sinR Probable HTH-type transcriptional regulator SinR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q4G384 0.000168 46 28 3 125 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
Q9I6Z9 0.000198 46 28 3 132 3 bauR HTH-type transcriptional activator BauR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P67660 0.000236 45 40 0 62 1 yhaJ Probable HTH-type transcriptional regulator YhaJ Escherichia coli (strain K12)
P67661 0.000236 45 40 0 62 1 yhaJ HTH-type transcriptional regulator YhaJ Escherichia coli O157:H7
P03030 0.000279 45 25 2 131 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
O32186 0.000282 45 26 2 130 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
P52675 0.000324 43 31 4 116 3 cysB HTH-type transcriptional regulator CysB (Fragment) Thiocapsa roseopersicina
Q9S4Y7 0.000418 45 24 11 265 3 allS HTH-type transcriptional activator AllS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PCH2 0.000418 45 24 11 265 3 allS HTH-type transcriptional activator AllS Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57S50 0.000425 45 24 11 265 3 allS HTH-type transcriptional activator AllS Salmonella choleraesuis (strain SC-B67)
P37682 0.000437 45 22 8 258 3 yiaU Uncharacterized HTH-type transcriptional regulator YiaU Escherichia coli (strain K12)
P52662 0.000671 44 28 0 115 3 pecT HTH-type transcriptional regulator PecT Dickeya dadantii (strain 3937)
P94403 0.000716 44 24 3 121 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00890
Feature type CDS
Gene dsdC
Product DNA-binding transcriptional regulator DsdC
Location 219014 - 219958 (strand: -1)
Length 945 (nucleotides) / 314 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2933
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K13636 LysR family transcriptional regulator, D-serine deaminase activator - -

Protein Sequence

MFGSSNVILRNKRLSSYQLARLHTFEATGRHLSFALAAEELSLTPSAISHRINTLEKELGIKLFNRFHRRIELTEEGERIYWALKKTLEDINQEILDIYNQEISGVLTVYSRPSIAQCWLVPRISDFTQRYPSIELNLLTGNDDINFRGYGIDLAIYFDDKHLKNLYCEDLISESIIPVCSPEYAARHELVGNIHHLANCTLLHDRQAWSNNSDFDEWRAWSEYMGLGLFPNKSNICFDRSDLAVIAAVNHSGVAMGRKRLIQKQLANNELIVPFDNCEFFCAQRYYLVTRDEKSNAKVQLFIQWLKKQILQGM

Flanking regions ( +/- flanking 50bp)

AACTTGATTATTACCTTACGTTACTAATAATAATTAAATGAGAATAAAAAATGTTTGGATCTTCTAACGTGATTTTGAGAAATAAGCGCTTATCCAGTTATCAATTAGCACGACTTCACACTTTTGAAGCAACAGGACGGCATTTATCATTCGCTTTAGCCGCAGAGGAATTGTCCTTGACGCCTAGCGCGATTAGCCATCGTATTAATACACTAGAGAAAGAATTAGGGATAAAGCTATTTAATCGCTTTCATCGGCGTATTGAATTAACCGAAGAAGGTGAACGTATTTATTGGGCATTGAAAAAAACACTTGAAGATATTAATCAAGAGATTTTAGATATCTATAATCAAGAAATATCTGGCGTATTAACGGTGTATTCTCGCCCTTCTATTGCGCAATGTTGGCTTGTACCTCGTATTTCTGATTTTACTCAACGCTATCCTTCTATTGAATTAAACTTACTTACTGGCAATGACGATATTAATTTTCGTGGTTATGGTATCGATCTCGCTATCTATTTCGATGATAAACACCTGAAAAATCTCTATTGTGAAGATTTAATCTCAGAATCAATTATTCCTGTTTGTAGCCCTGAATATGCTGCTCGCCATGAATTAGTAGGTAATATCCATCACCTTGCTAATTGTACTTTGTTACATGATAGACAAGCTTGGAGTAATAACTCTGATTTTGATGAATGGCGCGCTTGGAGTGAATATATGGGATTAGGATTATTTCCAAATAAAAGTAATATTTGTTTTGATCGCTCTGATTTAGCTGTTATTGCTGCCGTTAATCATTCCGGTGTCGCAATGGGGCGTAAACGCTTAATTCAAAAACAACTCGCAAATAATGAATTAATAGTCCCTTTTGATAATTGTGAGTTTTTTTGTGCACAACGCTATTATCTGGTTACCCGCGATGAAAAGAGTAACGCTAAAGTACAGCTTTTTATTCAATGGCTGAAAAAACAGATCTTACAAGGGATGTGATCTGACAAAATAAAAAAGAGATCGGTTTAATCTAAGCCGATCTCTTACTC