Homologs in group_2673

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04875 FBDBKF_04875 100.0 Morganella morganii S1 emrA Multidrug resistance efflux pump EmrA
EHELCC_06165 EHELCC_06165 100.0 Morganella morganii S2 emrA Multidrug resistance efflux pump EmrA
LHKJJB_03365 LHKJJB_03365 100.0 Morganella morganii S3 emrA Multidrug resistance efflux pump EmrA
HKOGLL_06840 HKOGLL_06840 100.0 Morganella morganii S5 emrA Multidrug resistance efflux pump EmrA
F4V73_RS09475 F4V73_RS09475 77.8 Morganella psychrotolerans - HlyD family secretion protein

Distribution of the homologs in the orthogroup group_2673

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2673

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9EXN6 0.0 597 65 1 422 3 mchE Microcin H47 secretion protein MchE Escherichia coli
P22519 0.0 577 64 1 411 1 cvaA Colicin V secretion protein CvaA Escherichia coli
P09986 5.24e-09 61 21 12 439 1 hlyD Hemolysin secretion protein D, chromosomal Escherichia coli
P16534 6.77e-09 61 22 17 433 3 lktD Leukotoxin secretion protein D Mannheimia haemolytica
P06739 7.51e-07 55 21 13 438 1 hlyD Hemolysin secretion protein D, plasmid Escherichia coli
P55125 3.04e-06 53 22 17 443 3 lktD Leukotoxin secretion protein D Pasteurella haemolytica-like sp. (strain 5943B)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_06485
Feature type CDS
Gene emrA
Product Multidrug resistance efflux pump EmrA
Location 282532 - 283818 (strand: -1)
Length 1287 (nucleotides) / 428 (amino acids)

Contig

Accession ZDB_521
Length 325332 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2673
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00529 Cation efflux system protein CusB domain 1
PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1566 Defense mechanisms (V) V Multidrug resistance efflux pump EmrA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K13408 membrane fusion protein Plant-pathogen interaction -

Protein Sequence

MFRKAALDNRKMKWRGKALLLPGIPLWLIIVCSFLFLMVFLTLILSGSYTRRVSVTGEITTNPRAVTVYAGVQGFITGQYVNEGQIIRKGDPVYRIDTSRATASGVVSENQRREIENQLQHIRDMTARLRDNKQTTLASLEKQKSLYAQAQLRSAGIIERAQEGIRIMKQNMDNYHHYRERGLINKDQWLNQAALYYSQQNSLLGLSGQNEQNILQVTSLESQILTQAAEFDNRIYQLELQQSELMKEQVNNDAGGEIIVRALTDGRVDSLGVTVGQMVNPGDTLLQILPENIRQYWLVLWVPNDALPYLNVGDAVNIRYEAFPAEKFGQFAATIQVISKTPASAQEMMTYAGAPKVSQMPQSIPYYKVIVRPEKQMIAYDGRELSLQNGMKANTTLFLEKRKIYQWMVSPFYDMKQSASGPTGADTP

Flanking regions ( +/- flanking 50bp)

CTGATACTGACGGCCTTTTATTCACCGGATAACCGCAGGCAGGGTTTATTGTGTTCCGCAAAGCCGCACTCGATAACCGAAAAATGAAATGGCGGGGTAAGGCCTTATTATTACCCGGTATTCCGCTGTGGCTGATTATAGTATGCAGTTTTCTGTTTTTAATGGTTTTTCTGACCTTGATCTTGTCCGGCAGCTATACGCGGCGGGTCAGTGTGACCGGAGAAATCACCACCAATCCCCGGGCTGTTACTGTATATGCAGGTGTGCAGGGATTTATTACCGGGCAATATGTGAATGAAGGGCAGATTATCCGCAAAGGGGATCCGGTTTACCGTATTGATACCAGCAGAGCCACAGCCAGCGGTGTGGTCAGTGAAAATCAGCGCCGTGAAATTGAAAATCAGTTACAGCATATCCGTGATATGACCGCCCGTCTCAGAGATAACAAACAGACCACTCTGGCCTCGCTCGAAAAACAAAAGTCCCTTTATGCACAGGCACAGTTGCGATCTGCCGGGATTATTGAACGGGCACAGGAAGGGATCCGCATTATGAAACAGAATATGGATAATTATCATCATTACCGGGAAAGAGGGCTGATAAATAAAGATCAGTGGCTGAATCAGGCTGCGCTTTATTATTCTCAGCAAAACAGTCTGCTGGGATTAAGCGGACAGAATGAACAGAATATTCTGCAGGTTACGTCTCTGGAAAGCCAGATCCTGACTCAGGCGGCAGAATTTGATAACCGGATTTATCAGCTGGAATTACAACAGTCTGAGCTGATGAAAGAGCAGGTGAATAATGACGCGGGTGGTGAGATTATCGTTCGTGCCCTGACAGACGGCCGTGTGGATTCCCTTGGCGTGACCGTCGGTCAGATGGTCAATCCCGGTGATACCCTGCTGCAGATCCTGCCGGAAAATATCCGTCAGTACTGGCTGGTGCTCTGGGTGCCCAATGACGCACTGCCTTATCTGAATGTCGGTGACGCGGTGAATATCCGTTATGAAGCTTTCCCGGCAGAAAAATTCGGCCAGTTTGCCGCCACCATTCAGGTGATTTCCAAAACCCCTGCCTCTGCACAGGAAATGATGACCTATGCCGGGGCGCCGAAAGTCAGTCAGATGCCGCAGTCCATCCCCTATTACAAAGTGATTGTACGTCCGGAAAAACAGATGATCGCCTATGACGGCCGCGAACTCAGCCTGCAAAACGGCATGAAAGCCAATACCACCCTGTTTCTGGAAAAACGCAAAATCTATCAGTGGATGGTATCGCCATTCTATGACATGAAACAGAGCGCCTCCGGGCCAACAGGAGCAGACACACCATGACAGAACGGACGCTGTTATCTGACCGGGAGGCTGTATGCGCTGTTTATCCC