Homologs in group_512

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01060 FBDBKF_01060 100.0 Morganella morganii S1 rodZ cytoskeleton protein RodZ
EHELCC_00485 EHELCC_00485 100.0 Morganella morganii S2 rodZ cytoskeleton protein RodZ
LHKJJB_04490 LHKJJB_04490 100.0 Morganella morganii S3 rodZ cytoskeleton protein RodZ
HKOGLL_02555 HKOGLL_02555 100.0 Morganella morganii S5 rodZ cytoskeleton protein RodZ
F4V73_RS07135 F4V73_RS07135 80.6 Morganella psychrotolerans rodZ cytoskeleton protein RodZ
PMI_RS09110 PMI_RS09110 43.7 Proteus mirabilis HI4320 rodZ cytoskeleton protein RodZ

Distribution of the homologs in the orthogroup group_512

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_512

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A4WD94 8.62e-85 263 43 8 332 3 rodZ Cytoskeleton protein RodZ Enterobacter sp. (strain 638)
A8GHW6 2.48e-84 261 43 7 324 3 rodZ Cytoskeleton protein RodZ Serratia proteamaculans (strain 568)
B5XNL4 5.13e-82 255 41 5 327 3 rodZ Cytoskeleton protein RodZ Klebsiella pneumoniae (strain 342)
B4T0Q0 6.73e-82 255 42 5 332 3 rodZ Cytoskeleton protein RodZ Salmonella newport (strain SL254)
Q8Z4P3 1.04e-81 254 43 6 323 3 rodZ Cytoskeleton protein RodZ Salmonella typhi
B5R583 1.5e-81 254 42 5 330 3 rodZ Cytoskeleton protein RodZ Salmonella enteritidis PT4 (strain P125109)
B5FR64 1.5e-81 254 42 5 330 3 rodZ Cytoskeleton protein RodZ Salmonella dublin (strain CT_02021853)
Q8ZN53 1.87e-81 254 42 5 330 3 rodZ Cytoskeleton protein RodZ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B5BAY4 1.87e-81 254 42 5 330 3 rodZ Cytoskeleton protein RodZ Salmonella paratyphi A (strain AKU_12601)
A9N200 1.87e-81 254 42 5 330 3 rodZ Cytoskeleton protein RodZ Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PNI3 1.87e-81 254 42 5 330 3 rodZ Cytoskeleton protein RodZ Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5F199 1.87e-81 254 42 5 330 3 rodZ Cytoskeleton protein RodZ Salmonella agona (strain SL483)
C0PYM9 2.88e-81 253 42 5 330 3 rodZ Cytoskeleton protein RodZ Salmonella paratyphi C (strain RKS4594)
B4TD94 2.88e-81 253 42 5 330 3 rodZ Cytoskeleton protein RodZ Salmonella heidelberg (strain SL476)
Q57LI5 2.88e-81 253 42 5 330 3 rodZ Cytoskeleton protein RodZ Salmonella choleraesuis (strain SC-B67)
A7MGV6 5.3e-81 253 40 6 332 3 rodZ Cytoskeleton protein RodZ Cronobacter sakazakii (strain ATCC BAA-894)
A6TCD5 9.63e-81 252 42 8 330 3 rodZ Cytoskeleton protein RodZ Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5RCZ3 1.51e-80 252 41 5 330 3 rodZ Cytoskeleton protein RodZ Salmonella gallinarum (strain 287/91 / NCTC 13346)
A1JKS1 3.33e-80 251 41 9 346 3 rodZ Cytoskeleton protein RodZ Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B7NRG6 7.61e-80 250 41 7 336 3 rodZ Cytoskeleton protein RodZ Escherichia coli O7:K1 (strain IAI39 / ExPEC)
A9MHL4 1.17e-79 249 41 4 320 3 rodZ Cytoskeleton protein RodZ Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B1LNH1 1.59e-79 249 41 7 336 3 rodZ Cytoskeleton protein RodZ Escherichia coli (strain SMS-3-5 / SECEC)
B7MYF1 5.18e-79 248 41 7 336 3 rodZ Cytoskeleton protein RodZ Escherichia coli O81 (strain ED1a)
Q1R8L7 7.16e-79 248 41 7 336 3 rodZ Cytoskeleton protein RodZ Escherichia coli (strain UTI89 / UPEC)
A1AE54 7.16e-79 248 41 7 336 3 rodZ Cytoskeleton protein RodZ Escherichia coli O1:K1 / APEC
B7MI01 7.16e-79 248 41 7 336 3 rodZ Cytoskeleton protein RodZ Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UGW2 7.16e-79 248 41 7 336 3 rodZ Cytoskeleton protein RodZ Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B4TR96 1.78e-78 246 42 5 330 3 rodZ Cytoskeleton protein RodZ Salmonella schwarzengrund (strain CVM19633)
A4TMT8 1.81e-78 247 41 7 349 3 rodZ Cytoskeleton protein RodZ Yersinia pestis (strain Pestoides F)
Q1CK92 2.2e-78 246 41 7 349 3 rodZ Cytoskeleton protein RodZ Yersinia pestis bv. Antiqua (strain Nepal516)
A9R803 2.2e-78 246 41 7 349 3 rodZ Cytoskeleton protein RodZ Yersinia pestis bv. Antiqua (strain Angola)
Q7CJM7 2.2e-78 246 41 7 349 3 rodZ Cytoskeleton protein RodZ Yersinia pestis
Q1C5I7 2.2e-78 246 41 7 349 3 rodZ Cytoskeleton protein RodZ Yersinia pestis bv. Antiqua (strain Antiqua)
Q0TEW9 2.71e-78 246 41 7 336 3 rodZ Cytoskeleton protein RodZ Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q3YZ36 2.75e-78 246 41 8 338 3 rodZ Cytoskeleton protein RodZ Shigella sonnei (strain Ss046)
Q83QK7 2.75e-78 246 41 8 338 3 rodZ Cytoskeleton protein RodZ Shigella flexneri
Q0T203 2.75e-78 246 41 8 338 3 rodZ Cytoskeleton protein RodZ Shigella flexneri serotype 5b (strain 8401)
Q32D46 3.35e-78 246 41 8 338 3 rodZ Cytoskeleton protein RodZ Shigella dysenteriae serotype 1 (strain Sd197)
Q8FF56 5.01e-78 245 41 7 336 3 rodZ Cytoskeleton protein RodZ Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A8AD70 2.27e-77 244 39 6 338 3 rodZ Cytoskeleton protein RodZ Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q667Z8 6.46e-77 243 39 7 363 3 rodZ Cytoskeleton protein RodZ Yersinia pseudotuberculosis serotype I (strain IP32953)
B2K9Q1 6.46e-77 243 39 7 363 3 rodZ Cytoskeleton protein RodZ Yersinia pseudotuberculosis serotype IB (strain PB1/+)
B7N6A4 7.86e-77 242 40 6 337 3 rodZ Cytoskeleton protein RodZ Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7M7M0 7.86e-77 242 40 6 337 3 rodZ Cytoskeleton protein RodZ Escherichia coli O8 (strain IAI1)
B7LDA8 7.86e-77 242 40 6 337 3 rodZ Cytoskeleton protein RodZ Escherichia coli (strain 55989 / EAEC)
B2TXU1 9.44e-77 242 40 6 337 3 rodZ Cytoskeleton protein RodZ Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B6I588 9.44e-77 242 40 6 337 3 rodZ Cytoskeleton protein RodZ Escherichia coli (strain SE11)
B1IWE5 9.44e-77 242 40 6 337 3 rodZ Cytoskeleton protein RodZ Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A322 9.44e-77 242 40 6 337 3 rodZ Cytoskeleton protein RodZ Escherichia coli O9:H4 (strain HS)
B5Z0Y5 1.81e-76 241 40 6 337 3 rodZ Cytoskeleton protein RodZ Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q7ABM8 1.81e-76 241 40 6 337 3 rodZ Cytoskeleton protein RodZ Escherichia coli O157:H7
B7LKC2 2.26e-76 241 40 5 338 3 rodZ Cytoskeleton protein RodZ Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
A7ZPV9 2.52e-76 241 40 6 337 3 rodZ Cytoskeleton protein RodZ Escherichia coli O139:H28 (strain E24377A / ETEC)
P27434 5.09e-76 240 40 6 337 1 rodZ Cytoskeleton protein RodZ Escherichia coli (strain K12)
B1XAZ1 5.09e-76 240 40 6 337 3 rodZ Cytoskeleton protein RodZ Escherichia coli (strain K12 / DH10B)
C4ZX91 5.09e-76 240 40 6 337 3 rodZ Cytoskeleton protein RodZ Escherichia coli (strain K12 / MC4100 / BW2952)
B1JS04 9.93e-76 240 39 8 365 3 rodZ Cytoskeleton protein RodZ Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
B2VE88 7.69e-75 237 39 9 353 3 rodZ Cytoskeleton protein RodZ Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
A7FFY8 1.96e-74 237 39 8 367 3 rodZ Cytoskeleton protein RodZ Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q31XX4 1.3e-72 231 40 6 337 3 rodZ Cytoskeleton protein RodZ Shigella boydii serotype 4 (strain Sb227)
Q6D275 4.09e-67 217 39 6 348 3 rodZ Cytoskeleton protein RodZ Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q57065 8.97e-26 108 28 10 300 4 HI_0367 Uncharacterized protein HI_0367 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_02975
Feature type CDS
Gene rodZ
Product cytoskeleton protein RodZ
Location 564461 - 565519 (strand: -1)
Length 1059 (nucleotides) / 352 (amino acids)

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_512
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13413 Helix-turn-helix domain
PF13464 RodZ C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1426 Cell cycle control, cell division, chromosome partitioning (D) D Cytoskeletal protein RodZ, contains Xre-like HTH and DUF4115 domains

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K15539 cytoskeleton protein RodZ - -

Protein Sequence

MQYAGIRNFGARKGRSPRFLVTRTVCVLKLMNNSQSQDNLQLTLGQFLTQRREQLQLSRETVADRLCLKLTTVREIEEDALKEGNPTFIRGYVRTYAKLLQIPESAIMPYLDKIAPAQMTKVQPMKSVTIGRQRKKREGWLMKFTWLVLLVVLALVGVWWWQQYQAQQADIASLAQQNDVTVNAPADVPGTDPADSTAPQTLNAPAGTPDTAPAGNTNTAALELSAATPQDQEIDSSKIVPLPGSDRVPAVVNRAVDSEGGTLPTTTQTQDGLVLTFKNTCWLEVTDNKGTKIFSGTKQKGDTLEFAGAEPYRLKIGAPAAVDVQFKGQSVDLSHFVKANRVANLSVPKAGE

Flanking regions ( +/- flanking 50bp)

AATATAAAAGTGATGTTGTTTTCAGGATTATTTTTATCATTACGGGTGGCATGCAGTATGCCGGAATACGGAACTTCGGTGCGCGGAAGGGCAGATCTCCGCGCTTTCTCGTAACCAGAACTGTTTGTGTCCTGAAACTCATGAATAACTCTCAATCTCAAGATAATCTCCAACTCACTCTTGGCCAATTCTTAACACAACGTCGGGAACAACTTCAGTTATCACGGGAAACAGTCGCCGACAGACTTTGTCTTAAACTGACTACAGTGCGTGAAATCGAAGAAGATGCACTGAAAGAAGGCAACCCGACCTTTATCCGCGGTTATGTCCGTACGTATGCCAAGCTGTTGCAGATCCCTGAATCTGCGATCATGCCTTATCTTGATAAAATCGCCCCCGCTCAGATGACCAAAGTCCAGCCGATGAAAAGTGTGACTATCGGCCGCCAGCGTAAAAAACGCGAAGGCTGGCTGATGAAGTTCACCTGGCTGGTACTGCTGGTGGTTCTGGCGCTGGTTGGCGTGTGGTGGTGGCAGCAGTATCAGGCACAACAGGCTGATATTGCTTCACTGGCACAACAGAATGATGTCACCGTGAATGCCCCGGCAGATGTTCCGGGTACCGATCCGGCAGACAGCACCGCACCACAGACACTGAATGCCCCTGCCGGAACGCCGGACACCGCTCCGGCCGGTAATACCAATACCGCTGCACTGGAATTATCGGCAGCCACCCCGCAGGATCAGGAAATTGACAGCAGCAAGATTGTGCCGCTGCCGGGCAGTGACCGCGTACCGGCGGTTGTTAACCGTGCCGTAGACAGTGAAGGCGGCACGCTGCCGACCACCACACAGACACAGGATGGTCTGGTTCTGACCTTTAAAAACACCTGCTGGCTGGAAGTGACAGATAACAAAGGTACAAAAATTTTCAGCGGCACCAAACAGAAAGGGGATACCCTGGAATTTGCGGGCGCAGAACCTTACCGTCTGAAAATCGGCGCACCGGCTGCCGTGGATGTGCAGTTCAAAGGTCAGAGTGTTGACCTGAGTCATTTTGTTAAGGCAAACCGGGTGGCAAACCTGAGTGTGCCGAAAGCCGGTGAATAATTGGTTTATAAATTAAATCTTTACTACACAATAAACACAGCAATGATTAA