Homologs in group_2558

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02655 FBDBKF_02655 100.0 Morganella morganii S1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
EHELCC_03125 EHELCC_03125 100.0 Morganella morganii S2 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_01700 LHKJJB_01700 100.0 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_01740 HKOGLL_01740 100.0 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS05155 F4V73_RS05155 81.3 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator

Distribution of the homologs in the orthogroup group_2558

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2558

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A0R666 9.51e-06 48 23 3 138 1 ethR HTH-type transcriptional regulator EthR Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_00335
Feature type CDS
Gene acrR
Product DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
Location 63463 - 64059 (strand: -1)
Length 597 (nucleotides) / 198 (amino acids)

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2558
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF00440 Bacterial regulatory proteins, tetR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1309 Transcription (K) K DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Protein Sequence

MSGRLQRDERQIQLLNVANSIILAEGTDALTLITLAEKAGVTKPVTYKHFGNRKSLLHALFKYSDDVLTERMNTGMEQPIADLDQAVSVFITTYFDVMADDGEAFNATVAALKAYPEYAGISREVQDFFCQILQRALQRWLPDNFRIPEWTSVMIFGATESLCLMMFADPALKAKVCEEAIWLVKTLLADQLKRFTGR

Flanking regions ( +/- flanking 50bp)

ATACACTTTCCGGCAGACAGAACGACTTTAATATCAATGAGGAGGCAGATTTGTCCGGACGTTTACAGCGCGACGAGCGCCAGATACAACTGCTCAATGTTGCCAACAGCATTATCCTGGCGGAAGGCACCGATGCCCTGACCCTCATTACTCTTGCGGAAAAGGCGGGCGTGACCAAGCCGGTGACCTACAAGCATTTCGGCAACCGCAAGTCTTTGCTGCACGCGCTGTTTAAATACAGTGATGATGTTCTGACCGAACGGATGAATACCGGGATGGAACAGCCGATAGCGGACCTCGATCAGGCCGTTTCTGTCTTTATCACGACCTATTTTGATGTGATGGCGGATGACGGGGAAGCCTTCAATGCCACCGTGGCGGCACTGAAAGCCTATCCTGAATATGCGGGGATCAGCCGCGAAGTGCAGGATTTTTTCTGCCAGATCCTGCAACGTGCACTGCAGCGCTGGCTGCCGGATAATTTCCGGATCCCGGAATGGACTTCTGTGATGATTTTCGGTGCAACCGAGTCACTGTGCCTGATGATGTTTGCTGACCCGGCGCTGAAAGCAAAAGTCTGTGAAGAAGCCATCTGGCTGGTCAAAACCCTGCTGGCCGACCAGCTTAAGCGGTTCACCGGCCGCTGATGACCAGTTCTTCCTCTTCTGACGGATAACTGAAGTGCGCGGTGATCAGG