Homologs in group_2586

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_03125 EHELCC_03125 100.0 Morganella morganii S2 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_00335 NLDBIP_00335 100.0 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_01700 LHKJJB_01700 100.0 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_01740 HKOGLL_01740 100.0 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS05155 F4V73_RS05155 81.3 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator

Distribution of the homologs in the orthogroup group_2586

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2586

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A0R666 9.51e-06 48 23 3 138 1 ethR HTH-type transcriptional regulator EthR Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_02655
Feature type CDS
Gene acrR
Product DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
Location 228257 - 228853 (strand: 1)
Length 597 (nucleotides) / 198 (amino acids)
In genomic island -

Contig

Accession contig_2
Length 292399 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2586
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00440 Bacterial regulatory proteins, tetR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1309 Transcription (K) K DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Protein Sequence

MSGRLQRDERQIQLLNVANSIILAEGTDALTLITLAEKAGVTKPVTYKHFGNRKSLLHALFKYSDDVLTERMNTGMEQPIADLDQAVSVFITTYFDVMADDGEAFNATVAALKAYPEYAGISREVQDFFCQILQRALQRWLPDNFRIPEWTSVMIFGATESLCLMMFADPALKAKVCEEAIWLVKTLLADQLKRFTGR

Flanking regions ( +/- flanking 50bp)

ATACACTTTCCGGCAGACAGAACGACTTTAATATCAATGAGGAGGCAGATTTGTCCGGACGTTTACAGCGCGACGAGCGCCAGATACAACTGCTCAATGTTGCCAACAGCATTATCCTGGCGGAAGGCACCGATGCCCTGACCCTCATTACTCTTGCGGAAAAGGCGGGCGTGACCAAGCCGGTGACCTACAAGCATTTCGGCAACCGCAAGTCTTTGCTGCACGCGCTGTTTAAATACAGTGATGATGTTCTGACCGAACGGATGAATACCGGGATGGAACAGCCGATAGCGGACCTCGATCAGGCCGTTTCTGTCTTTATCACGACCTATTTTGATGTGATGGCGGATGACGGGGAAGCCTTCAATGCCACCGTGGCGGCACTGAAAGCCTATCCTGAATATGCGGGGATCAGCCGCGAAGTGCAGGATTTTTTCTGCCAGATCCTGCAACGTGCACTGCAGCGCTGGCTGCCGGATAATTTCCGGATCCCGGAATGGACTTCTGTGATGATTTTCGGTGCAACCGAGTCACTGTGCCTGATGATGTTTGCTGACCCGGCGCTGAAAGCAAAAGTCTGTGAAGAAGCCATCTGGCTGGTCAAAACCCTGCTGGCCGACCAGCTTAAGCGGTTCACCGGCCGCTGATGACCAGTTCTTCCTCTTCTGACGGATAACTGAAGTGCGCGGTGATCAGG