Homologs in group_2999

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17470 FBDBKF_17470 100.0 Morganella morganii S1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
EHELCC_17365 EHELCC_17365 100.0 Morganella morganii S2 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_17830 NLDBIP_17830 100.0 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_17760 HKOGLL_17760 100.0 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS16645 F4V73_RS16645 78.8 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator

Distribution of the homologs in the orthogroup group_2999

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2999

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P32398 0.000369 43 46 0 47 4 yhgD Uncharacterized HTH-type transcriptional regulator YhgD Bacillus subtilis (strain 168)
P96676 0.000739 42 40 1 54 4 ydeS Uncharacterized HTH-type transcriptional regulator YdeS Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_17750
Feature type CDS
Gene acrR
Product DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
Location 13818 - 14447 (strand: -1)
Length 630 (nucleotides) / 209 (amino acids)

Contig

Accession ZDB_380
Length 42793 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2999
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00440 Bacterial regulatory proteins, tetR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1309 Transcription (K) K DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Protein Sequence

MANNEAATEPRGRGRPVVPEEELIAKIREASLSLLLSQGYSAMTMDAVAKQAGVSKKTLYRFAGNREDLAEQIVRGWTDSFVPLFMQDAKTKDEFYQLLENNLTIMSHKVLSAEAAGLFCLLSSEFPGRELLLTRYQAGGIERGRALLAEWLSRHQAFLPLPDAAQTSDLLLSMVMAEPLRQIALKLAPPAPDYPVQARIRAAVALLKR

Flanking regions ( +/- flanking 50bp)

CTAATTAATGTTGTCCTGTAACGGGTATTTGTCAATTGAGGATCGCACGTATGGCTAATAATGAAGCTGCCACAGAACCCCGCGGACGTGGCCGTCCGGTTGTTCCGGAAGAAGAACTGATTGCAAAAATCCGCGAGGCATCACTTAGTCTGTTGTTATCACAGGGATATTCCGCAATGACGATGGATGCGGTGGCAAAACAGGCGGGTGTCTCCAAAAAGACGCTGTACCGGTTCGCTGGCAACCGTGAAGATCTGGCGGAGCAGATAGTGCGCGGCTGGACGGATTCCTTTGTGCCGCTGTTTATGCAGGATGCAAAGACTAAAGATGAATTTTATCAGCTGCTTGAAAACAATCTGACCATCATGAGCCACAAGGTGCTCAGCGCTGAGGCGGCGGGATTATTTTGTCTGCTGAGCAGTGAATTTCCCGGCCGGGAGTTATTGCTGACCCGCTATCAGGCCGGCGGAATTGAGCGCGGACGTGCACTGCTGGCGGAATGGCTGTCCCGGCATCAGGCGTTTCTGCCGCTGCCGGATGCAGCACAAACCAGTGATTTGCTGTTATCGATGGTAATGGCAGAGCCGCTGCGCCAGATTGCCCTGAAACTGGCACCACCAGCACCGGATTACCCGGTACAGGCGCGGATCCGTGCTGCGGTGGCATTACTGAAACGCTGACGGGCACCGGCGGATAACCGGCACCCGAAACCGCATTATTTCTGTATCAG