Homologs in group_2174

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16035 FBDBKF_16035 100.0 Morganella morganii S1 wzzB LPS O-antigen chain length determinant protein, WzzB/FepE family
EHELCC_18640 EHELCC_18640 100.0 Morganella morganii S2 wzzB LPS O-antigen chain length determinant protein, WzzB/FepE family
NLDBIP_17470 NLDBIP_17470 100.0 Morganella morganii S4 wzzB LPS O-antigen chain length determinant protein, WzzB/FepE family
HKOGLL_17205 HKOGLL_17205 100.0 Morganella morganii S5 wzzB LPS O-antigen chain length determinant protein, WzzB/FepE family
F4V73_RS16275 F4V73_RS16275 62.0 Morganella psychrotolerans - Wzz/FepE/Etk N-terminal domain-containing protein
PMI_RS10755 PMI_RS10755 32.4 Proteus mirabilis HI4320 wzz(fepE) LPS O-antigen length regulator Wzz(fepE)

Distribution of the homologs in the orthogroup group_2174

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2174

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P26266 3.33e-26 110 27 5 351 1 fepE Ferric enterobactin transport protein FepE Escherichia coli (strain K12)
O33953 1.2e-10 65 23 7 330 3 wzzB Chain length determinant protein Escherichia coli
P95730 4.82e-07 54 22 11 336 3 wzzB Chain length determinant protein Shigella dysenteriae
P37792 7.73e-07 53 22 11 336 1 wzzB Chain length determinant protein Shigella flexneri
P35272 1.75e-06 52 22 10 332 1 wzzB Chain length determinant protein Escherichia coli
P76372 2.86e-06 52 22 11 337 1 wzzB Chain length determinant protein Escherichia coli (strain K12)
Q04866 4.63e-06 51 23 9 347 1 wzzB Chain length determinant protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O33789 1.87e-05 49 22 12 338 3 wzzE ECA polysaccharide chain length modulation protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AG02 0.000341 45 21 11 339 3 wzzE ECA polysaccharide chain length modulation protein Shigella flexneri
P0AG00 0.000341 45 21 11 339 1 wzzE ECA polysaccharide chain length modulation protein Escherichia coli (strain K12)
P0AG01 0.000341 45 21 11 339 1 wzzE ECA polysaccharide chain length modulation protein Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_17190
Feature type CDS
Gene wzzB
Product LPS O-antigen chain length determinant protein, WzzB/FepE family
Location 6526 - 7515 (strand: -1)
Length 990 (nucleotides) / 329 (amino acids)
In genomic island -

Contig

Accession ZDB_378
Length 56187 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2174
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02706 Chain length determinant protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3765 Cell wall/membrane/envelope biogenesis (M) M LPS O-antigen chain length determinant protein, WzzB/FepE family

Protein Sequence

MVNEKGSVNLNNDEIDIIDLLKLLYRHKVFIVIVTVLFAAAGFGVSKILPQKWTSTAEVTATELRDMPELDKVSQQMNALNVTAVSDLPAAFNVFGTVWQSPSVQESFRLSQGDTAVSGSFGFQKTDGDILKPATAKVTFTAADPQTAQQMLSDYLDYTAQYSQNVMQTQLQENLAAALSAGQSQYNVALVRAEHQREQTLAYLAAAERVAPAAASVPPQNPEADPVASYSAMGRPAVMQMRDSLKALDLPAVDAELLDRAYALKTIKSIAPFSLNIVPFTVTESPDLPVVKDGPGTKMYLIASAFLGFILSVMAVFAWNMFVNRKKSA

Flanking regions ( +/- flanking 50bp)

TTTTAAGTGAAATTCAGTACTTCATCGCAGACAGGACAGGTGCTACGGACATGGTGAATGAGAAGGGTTCAGTGAACCTGAATAATGACGAGATCGATATTATTGATCTGCTGAAACTGTTATACCGCCATAAGGTTTTTATCGTCATTGTGACCGTATTATTCGCTGCCGCCGGGTTCGGTGTCTCCAAAATACTGCCGCAGAAATGGACCAGTACCGCCGAAGTGACGGCAACAGAGCTTCGTGACATGCCGGAGCTGGATAAAGTCAGCCAGCAGATGAATGCACTCAATGTGACTGCGGTATCTGATCTGCCGGCTGCATTTAATGTGTTCGGTACTGTCTGGCAGTCGCCGTCAGTACAGGAATCATTCCGCCTCTCACAGGGCGATACTGCTGTTTCCGGCTCTTTTGGTTTTCAGAAAACGGACGGCGATATACTGAAACCGGCTACTGCCAAAGTGACCTTCACTGCGGCAGATCCGCAAACAGCACAGCAAATGTTGTCGGATTACCTCGATTACACCGCACAATACAGCCAGAATGTGATGCAGACGCAGTTACAGGAAAACCTGGCCGCTGCGCTGAGTGCCGGTCAGAGTCAGTATAATGTGGCGCTGGTGAGAGCGGAACATCAGCGGGAGCAAACGCTGGCTTACCTGGCTGCAGCTGAACGGGTTGCACCGGCGGCGGCATCTGTTCCGCCTCAGAATCCGGAAGCTGACCCGGTTGCCTCTTACAGTGCCATGGGGCGTCCGGCAGTGATGCAGATGAGAGACTCCCTGAAAGCTCTGGATTTACCGGCTGTGGATGCGGAACTTCTGGACAGAGCCTATGCGCTGAAAACCATCAAAAGTATCGCGCCTTTCTCACTGAACATTGTTCCGTTCACCGTGACCGAGTCCCCGGATCTGCCGGTGGTGAAAGACGGCCCCGGCACTAAAATGTATCTCATCGCATCCGCCTTTTTAGGGTTTATTCTGTCAGTGATGGCGGTTTTCGCATGGAATATGTTTGTTAACAGAAAAAAATCAGCATAATTTCCGGTTGAGCGGACATTGAGGGTTCTGTCCGCTCACATTCTTCCCCG