Homologs in group_2137

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16035 FBDBKF_16035 62.0 Morganella morganii S1 wzzB LPS O-antigen chain length determinant protein, WzzB/FepE family
EHELCC_18640 EHELCC_18640 62.0 Morganella morganii S2 wzzB LPS O-antigen chain length determinant protein, WzzB/FepE family
NLDBIP_17470 NLDBIP_17470 62.0 Morganella morganii S4 wzzB LPS O-antigen chain length determinant protein, WzzB/FepE family
LHKJJB_17190 LHKJJB_17190 62.0 Morganella morganii S3 wzzB LPS O-antigen chain length determinant protein, WzzB/FepE family
HKOGLL_17205 HKOGLL_17205 62.0 Morganella morganii S5 wzzB LPS O-antigen chain length determinant protein, WzzB/FepE family
PMI_RS10755 PMI_RS10755 28.9 Proteus mirabilis HI4320 wzz(fepE) LPS O-antigen length regulator Wzz(fepE)

Distribution of the homologs in the orthogroup group_2137

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2137

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P26266 1.16e-23 103 26 10 363 1 fepE Ferric enterobactin transport protein FepE Escherichia coli (strain K12)
O33953 1.46e-05 49 21 8 332 3 wzzB Chain length determinant protein Escherichia coli
P35272 7.19e-05 47 22 8 334 1 wzzB Chain length determinant protein Escherichia coli
P95730 0.000762 44 21 8 334 3 wzzB Chain length determinant protein Shigella dysenteriae

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16275
Feature type CDS
Gene -
Product Wzz/FepE/Etk N-terminal domain-containing protein
Location 67602 - 68591 (strand: -1)
Length 990 (nucleotides) / 329 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2137
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02706 Chain length determinant protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3765 Cell wall/membrane/envelope biogenesis (M) M LPS O-antigen chain length determinant protein, WzzB/FepE family

Protein Sequence

MMSTREPANLNDDEIDIIDLIKLLYRYKIFIIIVTLLFTVAGFGLSKLMPQKWTSTAEIAAVDVRDMPLLDKLRLQMGALNVSAVSDLPAAFNVLGAVWQSPDIQQSFLQSTGNLTTSGTFGFQGKEANLLMPATAKVSFTANNPQTAQRILSDYLDYTRDYSRTVLQTRLQENLDAALDKGKSEYRVAFIQVEHERNQTLAYLNMAGKIAGNSLVVPPQNTVSDPVAAYSALGRPAISEIENALKNMDLSKVNAGLRDKAYVLRAINNADTRTLDFIPFSVKEAPALPVVKDGPGVKMYILASAFLGFILSVLAIFSWNMFVNRKKSA

Flanking regions ( +/- flanking 50bp)

TTTTGAGTGAAATGGCGTATTTCATAGCAGAAATGACGGGTGGCGCGGATATGATGAGTACAAGGGAACCAGCGAATCTGAATGATGATGAGATTGATATTATCGATCTCATTAAACTGCTTTATCGCTATAAAATTTTTATTATTATAGTGACACTGCTGTTTACGGTCGCCGGGTTTGGTTTGTCAAAACTTATGCCGCAAAAATGGACAAGCACGGCTGAAATTGCCGCCGTTGATGTCCGTGATATGCCATTATTAGATAAGCTGCGCCTGCAAATGGGGGCGCTGAATGTGTCTGCGGTATCTGACCTGCCTGCTGCATTTAATGTACTCGGTGCTGTCTGGCAGTCACCGGATATTCAGCAGAGTTTTTTACAGTCAACGGGCAATCTGACAACATCCGGTACATTCGGTTTTCAGGGAAAAGAGGCCAATTTACTGATGCCGGCAACAGCCAAAGTCTCTTTCACGGCGAATAACCCGCAAACTGCGCAGCGCATACTATCAGACTATCTGGATTATACCCGCGACTATAGTCGTACAGTGCTGCAAACCCGGTTACAGGAAAATCTGGATGCTGCGCTGGATAAGGGAAAAAGTGAATACCGTGTTGCATTTATACAGGTTGAGCATGAGCGCAATCAGACACTTGCCTACCTGAATATGGCCGGAAAAATAGCCGGAAACAGTCTGGTTGTTCCACCACAAAATACGGTGTCTGATCCGGTAGCTGCCTACAGTGCGTTAGGGCGTCCGGCTATTTCTGAAATAGAAAATGCATTGAAAAACATGGATTTGTCTAAAGTGAATGCAGGGCTTCGGGACAAGGCTTATGTTTTACGGGCGATTAATAATGCGGATACCCGCACGCTGGATTTTATACCGTTTTCCGTGAAGGAAGCACCTGCTCTGCCGGTCGTAAAAGACGGACCGGGGGTTAAAATGTATATCCTGGCTTCTGCATTTTTAGGTTTTATTCTCTCTGTTCTGGCCATTTTTTCATGGAATATGTTTGTTAACCGGAAAAAATCAGCGTAATTTCCGGTTGAGCGGGCATTCATGTGTCTGCCCGCTCACATTCCTGTCAG