Homologs in group_1434

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08870 FBDBKF_08870 100.0 Morganella morganii S1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
EHELCC_12655 EHELCC_12655 100.0 Morganella morganii S2 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
NLDBIP_12995 NLDBIP_12995 100.0 Morganella morganii S4 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
HKOGLL_11470 HKOGLL_11470 100.0 Morganella morganii S5 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
F4V73_RS10075 F4V73_RS10075 89.4 Morganella psychrotolerans ampH D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH
PMI_RS17280 PMI_RS17280 58.4 Proteus mirabilis HI4320 ampH D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH

Distribution of the homologs in the orthogroup group_1434

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1434

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AD70 1.01e-147 427 58 1 347 1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Escherichia coli (strain K12)
P0AD71 1.01e-147 427 58 1 347 3 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Escherichia coli O157:H7
Q54SB6 3.97e-18 89 25 11 353 3 DDB_G0282555 Beta-lactamase-like protein 3 Dictyostelium discoideum
A8MY62 3.01e-14 77 29 9 261 1 LACTBL1 Putative beta-lactamase-like 1 Homo sapiens
P05193 1.36e-13 75 23 11 382 1 ampC Beta-lactamase Citrobacter freundii
Q48434 3.51e-13 73 23 10 358 1 blaCMY-2 Beta-lactamase CMY-2 Klebsiella pneumoniae
O53044 4.26e-13 73 23 10 358 3 blaCMY-4 Beta-lactamase CMY-4 Klebsiella pneumoniae
Q54SB5 1.56e-12 72 25 10 358 3 DDB_G0282557 Beta-lactamase-like protein 4 Dictyostelium discoideum
Q54VJ1 3.43e-12 71 27 6 274 3 DDB_G0280307 Beta-lactamase-like protein 2 Dictyostelium discoideum
P00811 1.31e-11 69 23 12 353 1 ampC Beta-lactamase Escherichia coli (strain K12)
P45460 8.1e-11 66 24 13 347 3 ampC Beta-lactamase Yersinia enterocolitica
Q8XBJ0 9.19e-11 67 24 11 274 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Escherichia coli O157:H7
P94958 1.53e-10 65 23 11 346 3 ampC Beta-lactamase Morganella morganii
Q6G6M9 2.39e-10 65 21 9 338 3 flp Protein flp Staphylococcus aureus (strain MSSA476)
P85302 4.39e-10 64 23 11 351 1 ampC Beta-lactamase Pseudomonas fluorescens
Q8NUZ4 5.5e-10 64 25 6 218 3 flp Protein flp Staphylococcus aureus (strain MW2)
P77619 6.46e-10 64 24 10 274 1 yfeW Putative D-alanyl-D-alanine carboxypeptidase Escherichia coli (strain K12)
Q5HDB2 1.36e-09 63 21 9 338 4 flp Protein flp Staphylococcus aureus (strain COL)
Q9KJ74 2.65e-09 62 21 9 338 4 flp Protein flp Staphylococcus aureus
Q2FVH6 2.65e-09 62 21 9 338 4 flp Protein flp Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q6GDZ1 4.6e-09 61 20 9 338 3 flp Protein flp Staphylococcus aureus (strain MRSA252)
Q7A3Q5 5.43e-09 61 20 9 338 1 flp Protein flp Staphylococcus aureus (strain N315)
Q99RJ0 5.43e-09 61 20 9 338 3 flp Protein flp Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q8Z4S7 6.19e-09 61 21 13 422 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella typhi
C0PZ64 6.76e-09 61 21 13 422 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella paratyphi C (strain RKS4594)
A9N307 6.76e-09 61 21 13 422 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4T0K5 6.76e-09 61 21 13 422 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella newport (strain SL254)
B5FQG8 6.76e-09 61 21 13 422 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella dublin (strain CT_02021853)
Q57LN2 6.76e-09 61 21 13 422 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella choleraesuis (strain SC-B67)
Q8ZN80 7.13e-09 60 21 13 422 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B5R4I5 8.45e-09 60 21 10 354 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella enteritidis PT4 (strain P125109)
B4TR50 8.6e-09 60 21 13 422 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella schwarzengrund (strain CVM19633)
B4TD53 1.09e-08 60 21 13 422 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella heidelberg (strain SL476)
B5BB26 1.15e-08 60 21 13 422 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella paratyphi A (strain AKU_12601)
Q5PCQ2 1.15e-08 60 21 13 422 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5F0K5 2.43e-08 59 23 10 274 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella agona (strain SL483)
O69773 5.19e-08 58 20 9 373 3 ampC Beta-lactamase Providencia stuartii
P9WLZ3 6.86e-08 57 23 8 318 1 Rv1367c Protein Rv1367c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WLZ2 6.86e-08 57 23 8 318 4 MT1414 Uncharacterized protein MT1414 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
B5RCU8 1.41e-07 57 23 7 206 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella gallinarum (strain 287/91 / NCTC 13346)
P05364 9.56e-07 54 21 10 351 1 ampC Beta-lactamase Enterobacter cloacae
Q9KX40 3.2e-06 52 25 7 220 1 estB Esterase EstB Burkholderia gladioli
O05213 5.88e-06 52 23 7 234 1 amiE N-acetylmuramyl-L-alanine amidase Bacillus subtilis (strain 168)
O31773 1.19e-05 50 21 5 232 2 pbpX Putative penicillin-binding protein PbpX Bacillus subtilis (strain 168)
P24735 2.76e-05 49 21 12 360 1 ampC Beta-lactamase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A6WYS5 2.87e-05 49 27 13 274 3 dap D-aminopeptidase Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37)
Q6GI27 2.99e-05 49 21 4 209 3 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain MRSA252)
Q7A185 3.47e-05 49 22 4 209 3 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain MW2)
O50608 3.47e-05 49 22 4 209 1 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus
Q6GAF6 3.47e-05 49 22 4 209 3 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain MSSA476)
Q7A6A2 3.47e-05 49 22 4 209 1 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain N315)
Q7A2T0 3.47e-05 49 22 4 209 1 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HH27 3.63e-05 49 22 4 209 2 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain COL)
Q2FZK3 3.63e-05 49 22 4 209 2 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain NCTC 8325 / PS 47)
P18539 6.68e-05 48 22 13 365 3 ampC Beta-lactamase Serratia marcescens
A0A2I1D2N1 0.000117 47 23 11 253 3 ungD' Unguisins hydrolase ungD' Aspergillus campestris (strain IBT 28561)
Q5FRJ7 0.000505 45 23 7 232 3 dap D-aminopeptidase Gluconobacter oxydans (strain 621H)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_13560
Feature type CDS
Gene ampH
Product D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
Location 154297 - 155520 (strand: -1)
Length 1224 (nucleotides) / 407 (amino acids)

Contig

Accession ZDB_370
Length 162442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1434
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00144 Beta-lactamase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1680 Defense mechanisms (V) V CubicO group peptidase, beta-lactamase class C family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K18988 serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] - -

Protein Sequence

MSKLHRHIVRLMPLSLLAIALSACSSQPEKHSTASAERPPLDWSIVESNPEALKLAPQLVDEIGEKIFSETDARGMFMVVIDNNEVFHRSYGETRPGNGIKPRTDSLIRIASVSKLMTSEVMVKMADDGLVNLNDPLQKYSYKQSSVPSYNGKPIRLFHLASHTSILPREQPGGKWGRPVFTWPSRDQRWTWLKTAKLTAQPGTEAAYSNLAYDLLADALEKAGNRPYSELFRHYVTQPAGMKDTTYNPSAAQCKRLMVGFKPSDCYSTLAAIGSGGVYSTPADMQKWMQRFLSSGNTQRKATATKEQTIYFKRGHLNEIKGMDVAGEADGLGLGWVYLAPVGDIPAIYQKTGGGGGFNTYMAMIPEKNIGVFVVMTRKDGSKFSPLPNGVNDLVRSLADLHTRNYL

Flanking regions ( +/- flanking 50bp)

GACTTACAGTGTCATATCCCTGTGTCTGCATGGAAGGCTGTTGAATTATCATGAGTAAATTACACCGTCATATTGTGCGCCTGATGCCGTTATCGCTGCTGGCTATCGCGCTGTCCGCCTGTTCTTCGCAGCCGGAGAAACACAGTACAGCGTCTGCCGAACGTCCGCCGCTTGACTGGTCTATTGTTGAAAGCAATCCGGAAGCACTGAAGCTGGCACCACAGCTGGTCGATGAGATCGGTGAGAAGATTTTCTCCGAAACCGATGCCCGCGGTATGTTTATGGTGGTGATTGATAATAACGAAGTGTTTCACCGCAGCTACGGCGAGACCCGTCCCGGAAATGGTATTAAGCCACGGACGGATTCGCTGATCCGCATTGCGTCCGTCAGTAAGCTGATGACCAGCGAAGTGATGGTGAAGATGGCGGATGACGGCCTGGTGAATCTCAATGATCCGCTGCAGAAATACAGTTATAAACAGTCCTCCGTGCCGTCCTATAACGGCAAGCCGATCCGCCTGTTCCACCTGGCGAGTCATACCAGTATCCTGCCGCGTGAGCAGCCCGGCGGGAAATGGGGTCGTCCGGTGTTTACCTGGCCGAGCCGCGATCAGCGCTGGACCTGGCTGAAAACCGCCAAACTGACGGCTCAGCCGGGAACAGAGGCCGCGTATTCCAATCTGGCCTATGATTTACTGGCAGATGCCCTGGAAAAAGCCGGAAATCGTCCGTATAGCGAGCTGTTCCGCCACTATGTGACACAACCGGCGGGTATGAAAGATACGACCTATAATCCGTCTGCCGCGCAGTGTAAGCGGCTGATGGTCGGGTTTAAACCGAGTGATTGTTACAGCACGCTGGCGGCTATCGGCAGCGGCGGGGTGTATTCCACCCCGGCGGATATGCAGAAGTGGATGCAGCGCTTCCTCTCTTCCGGCAATACACAGCGCAAAGCGACAGCCACCAAAGAGCAGACCATCTATTTTAAACGTGGTCATCTGAATGAGATCAAAGGGATGGATGTTGCCGGTGAGGCTGACGGTCTGGGTCTCGGCTGGGTGTATCTGGCGCCGGTCGGGGACATTCCGGCGATTTATCAGAAAACCGGCGGCGGCGGCGGATTTAATACTTATATGGCGATGATACCGGAGAAAAATATCGGTGTATTCGTAGTGATGACCCGCAAAGACGGCAGTAAATTCAGTCCGTTACCAAATGGTGTCAATGACCTGGTCCGTTCCCTGGCAGATCTGCATACCCGTAATTACCTGTGATACATAAGAGCATGCCCGCATCAGGCGCGGGCATGCTCTGTATATGCAGT