K18988


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K18988, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K18988
KO K18988
Description serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K18988 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1434 PMI_RS17280 3795147 3796364 -1 ampH D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH Proteus mirabilis HI4320
1 group_1434 FBDBKF_08870 155579 156802 -1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Morganella morganii S1
2 group_1434 EHELCC_12655 6923 8146 1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Morganella morganii S2
3 group_1434 NLDBIP_12995 6923 8146 1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Morganella morganii S4
4 group_1434 LHKJJB_13560 154297 155520 -1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Morganella morganii S3
5 group_1434 HKOGLL_11470 6923 8146 1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Morganella morganii S5
6 group_1434 F4V73_RS10075 123022 124245 -1 ampH D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH Morganella psychrotolerans