Homologs in group_2679

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05010 FBDBKF_05010 100.0 Morganella morganii S1 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
EHELCC_12580 EHELCC_12580 100.0 Morganella morganii S2 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
NLDBIP_12920 NLDBIP_12920 100.0 Morganella morganii S4 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
HKOGLL_11395 HKOGLL_11395 100.0 Morganella morganii S5 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
PMI_RS13025 PMI_RS13025 50.1 Proteus mirabilis HI4320 - TPM domain-containing protein

Distribution of the homologs in the orthogroup group_2679

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2679

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P55140 4.48e-22 98 36 2 145 3 ygcG UPF0603 protein YgcG Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_12780
Feature type CDS
Gene ygcG
Product Uncharacterized membrane protein YgcG, contains a TPM-fold domain
Location 172899 - 174041 (strand: 1)
Length 1143 (nucleotides) / 380 (amino acids)

Contig

Accession ZDB_369
Length 181491 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2679
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF04536 TPM domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1512 Function unknown (S) S Uncharacterized membrane protein YgcG, contains a TPM-fold domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06872 uncharacterized protein - -

Protein Sequence

MSRVMAGCLILLFVSFFARADVQALPELKRERVIDSAGLLTGSQLTQLNRQLIEYELSRNDGSQFVVFIVPSTGGESIETFAHRAFNTWKIGRKGQNNGLLLVVAVNDRNLRFEVGYGLEGILPDVSAGRIIRQRITPEFKKGHYFTGIEAGVTDAIDIISGNEPEYIKSETSGTEALKLKRLTIIYLLTFITVYLWSLFIGSPRRKKRIEKQVLNDIEYLREEYAKSKNKKKRQPERIIRLAQKRLTAFLQYKYIYPTPLGHTVNVLFYSVLIFIMTRVLIDGDPDPDALFISIMMLIFLNVFGSLFICYLLYTLIPEYLTQEAEIRKLTGVIAGTGGGYSSGSDSGSYSSSSGGSSGSSGSSGGGGGSSGGGGASGSW

Flanking regions ( +/- flanking 50bp)

ATGGCGGCGCGCTATGCGCGGCAGGGGAAAGAACATTCACAGGAGTAATGATGAGCAGGGTTATGGCAGGATGCCTGATACTTCTTTTTGTCAGTTTTTTTGCCCGTGCGGATGTGCAGGCTCTGCCGGAACTGAAACGGGAACGGGTTATTGACAGCGCCGGTCTTCTGACCGGCTCTCAATTAACACAGCTTAACCGGCAACTCATTGAGTATGAACTGAGCCGCAATGACGGCAGCCAGTTCGTGGTGTTTATTGTGCCGTCAACCGGCGGAGAAAGTATTGAGACATTTGCGCACCGTGCGTTTAATACATGGAAGATCGGCCGCAAAGGTCAGAATAACGGACTGTTGCTGGTCGTGGCGGTGAATGACCGTAATTTGCGTTTTGAGGTCGGCTATGGACTGGAAGGTATTCTGCCGGATGTCTCCGCAGGCCGTATTATCCGTCAGCGTATCACCCCTGAATTTAAAAAAGGCCATTATTTTACCGGAATTGAAGCGGGTGTGACCGATGCCATTGATATTATCAGCGGAAATGAACCGGAATATATCAAATCAGAGACATCCGGAACAGAAGCATTAAAACTCAAACGACTGACGATTATTTATCTTCTGACCTTTATTACGGTGTATCTCTGGTCATTATTTATTGGTTCTCCCCGCCGTAAGAAAAGGATAGAAAAGCAGGTTCTTAACGATATTGAATATCTGAGAGAAGAATACGCGAAATCCAAAAACAAGAAAAAACGTCAGCCTGAACGGATAATCCGCCTTGCGCAGAAACGCCTGACGGCATTTTTGCAGTATAAGTATATTTATCCGACACCGCTCGGCCATACTGTGAACGTATTATTTTATTCAGTTCTGATTTTTATAATGACACGGGTTCTGATAGACGGAGATCCTGATCCTGATGCGTTGTTCATCAGTATAATGATGCTCATTTTTCTTAATGTATTTGGCTCACTATTTATTTGTTATTTATTATATACATTAATTCCGGAATATCTTACTCAGGAAGCGGAAATACGGAAATTAACCGGTGTCATAGCAGGTACAGGAGGCGGGTATTCATCCGGTTCTGACAGTGGCAGTTACAGCAGCAGTTCCGGCGGTAGTTCCGGAAGCAGCGGATCGTCCGGTGGCGGAGGCGGCAGCAGTGGTGGTGGCGGTGCTTCCGGGAGCTGGTAAAAGACATAAAAAAGCCGTGACAAAGAATGCCACGGCTTTTTTTTACCGGA