Homologs in group_2800

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09120 FBDBKF_09120 100.0 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_10290 EHELCC_10290 100.0 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_10635 NLDBIP_10635 100.0 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
HKOGLL_13780 HKOGLL_13780 100.0 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS10830 F4V73_RS10830 83.7 Morganella psychrotolerans - fimbrial protein

Distribution of the homologs in the orthogroup group_2800

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2800

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P33340 5.79e-05 48 26 5 168 2 yehA Uncharacterized fimbrial-like protein YehA Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_10720
Feature type CDS
Gene fimA
Product Pilin (type 1 fimbrial protein)
Location 116500 - 117567 (strand: 1)
Length 1068 (nucleotides) / 355 (amino acids)

Contig

Accession ZDB_367
Length 191445 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2800
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MLRKTHFFAGLLMLITGYAQAECYNDGNKQAPPLTADLSETFYRQTETTLYFNTRYSGEFSCNGYSSSVSNASYLQKRSIVVGFQNGRYPVEFRVIDLQPGSTQKFAYSRNPYPADRLQARFTLSARVMPQNSRSDVTVPGSQYRFDGAVIAADTTRVGILQFFVRLGLDILTYLLTGHWPEHNEDLFLQPLDVIYQPRETTCTFDNADLLVELPQVDRAQLLRNTTAGMTRFHLDISCRDRLNGRTSRPVKAYLASNQVWLRDMKTLIDTSQGAAQGVGIRVGRYADTNDNSALVINPPGRQPRADSYLFEWGKDKFIEVNNGFNLWAYYYVYDAARLSAGRINTTAILNFEYY

Flanking regions ( +/- flanking 50bp)

GATCCGCAGAGTGCGCCTCTGCCCTGTGCAGAATAAAGGAGACATCACCGATGCTCAGAAAAACCCATTTTTTTGCCGGTCTGCTGATGCTGATCACCGGTTATGCGCAGGCAGAGTGCTACAACGACGGCAACAAACAGGCGCCGCCGCTGACAGCTGATCTGTCGGAAACCTTTTACCGTCAGACAGAAACCACCCTCTATTTTAATACCCGCTACAGCGGGGAATTCAGCTGTAACGGCTACAGCAGCAGCGTCTCCAACGCCTCTTACCTGCAAAAACGTTCCATTGTGGTCGGTTTTCAGAACGGCCGCTATCCGGTGGAGTTCCGGGTGATCGACCTCCAGCCCGGCAGCACCCAGAAATTCGCTTACAGCAGGAACCCGTACCCGGCGGACCGCCTTCAGGCACGTTTCACCCTCAGCGCGCGGGTGATGCCGCAGAACTCACGCAGTGATGTGACGGTGCCCGGCAGCCAGTACCGTTTTGACGGCGCGGTGATCGCCGCTGACACCACGCGGGTCGGCATCCTTCAGTTCTTTGTCCGCCTCGGGCTGGATATCCTCACTTATCTGCTGACCGGACACTGGCCGGAACATAATGAGGATCTGTTCCTGCAGCCGCTGGATGTCATTTATCAGCCCCGTGAAACCACCTGTACCTTTGATAATGCGGATTTATTAGTCGAACTGCCGCAGGTGGACAGAGCACAGCTGCTGCGTAACACAACCGCCGGGATGACACGTTTCCATCTGGATATCTCCTGCAGGGATCGCCTGAACGGCCGCACCAGCCGTCCGGTAAAAGCCTATCTGGCCAGCAATCAGGTCTGGCTGCGGGATATGAAAACCCTCATTGATACCTCACAGGGCGCGGCACAGGGTGTGGGGATCCGGGTCGGCCGTTATGCGGATACCAATGACAACAGTGCACTGGTGATCAACCCGCCGGGACGGCAGCCGCGTGCGGATTCCTATCTGTTTGAATGGGGAAAGGACAAATTTATTGAAGTAAATAACGGCTTTAATCTCTGGGCGTATTACTATGTCTATGATGCTGCCCGGCTCAGTGCAGGCCGCATCAATACCACGGCAATCCTCAATTTCGAGTACTACTAATCATAAATTCTGATAAAAATGGCCAGTAAAAACCGCAGAAAAAAGTGAAA