Homologs in group_2800

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09120 FBDBKF_09120 83.7 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_10290 EHELCC_10290 83.7 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_10635 NLDBIP_10635 83.7 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_10720 LHKJJB_10720 83.7 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_13780 HKOGLL_13780 83.7 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)

Distribution of the homologs in the orthogroup group_2800

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2800

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P33340 0.001 44 23 5 168 2 yehA Uncharacterized fimbrial-like protein YehA Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10830
Feature type CDS
Gene -
Product fimbrial protein
Location 301645 - 302712 (strand: -1)
Length 1068 (nucleotides) / 355 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2800
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MLRKCYFFAALLMLLTSYAQAECSNTGNKQAPPLSVDLSETFYRQTETTLYFNTRYSGEFSCTAYNNSVVNASYLQKRSLVVGFQNGRYPVEFRVIDLQPGNTLKFDYNRKPYPADRVQARFTLSARVLPQGSRSDVTVSGNQYRFDGAVIAADTSRIGLIQFFIRLGLDILSYLLSGHWPEHNEDLFLQPLDVTYQPRETTCSFDNADLLVELPQVDRARLQRDTTGGMTRFHLDISCRDRLNGRTSRPVKAYLASNQVYQQDMKTLTDMRPGAAKGVGIRIGRHADMNNNSAVIINPPGRQVRSDSYLFEWGKNTFIEVNNGLNLWAYYYVYDAAKLSAGRINTTAILNFEYY

Flanking regions ( +/- flanking 50bp)

ACGCCGCAAACCTCACCTCTTCTCTGTACTGAACAAGGCGATATCCCCTGATGCTCAGAAAATGTTACTTTTTCGCCGCTCTTCTGATGCTGCTGACCAGCTATGCGCAGGCGGAATGTTCAAATACCGGTAATAAACAGGCACCGCCGCTGTCTGTGGATCTGTCCGAAACCTTCTACCGGCAGACGGAAACCACACTCTATTTCAACACCCGTTACAGCGGCGAATTCAGCTGTACTGCTTACAATAATAGTGTGGTCAACGCCTCTTATCTGCAAAAACGCTCTCTGGTTGTCGGCTTTCAGAACGGGCGTTACCCGGTTGAATTCAGAGTGATTGACCTTCAGCCCGGCAATACCCTGAAATTTGATTACAACAGAAAACCCTACCCGGCTGACCGCGTTCAGGCGCGTTTCACACTCAGTGCGCGGGTACTGCCTCAGGGCTCCCGCAGCGATGTGACTGTCTCCGGCAATCAATACCGGTTTGACGGGGCGGTTATCGCGGCAGATACATCCCGCATTGGTTTGATTCAGTTTTTTATCCGTCTCGGGCTGGATATCCTCAGTTACCTGTTAAGCGGACACTGGCCGGAACATAATGAAGATCTGTTTCTGCAACCGCTGGATGTAACCTATCAGCCACGCGAAACAACCTGCTCCTTTGATAATGCAGACTTATTGGTTGAGTTGCCGCAGGTGGATCGTGCCCGCCTGCAACGTGATACAACCGGTGGCATGACCCGCTTTCATCTGGATATCTCCTGCCGCGATCGCCTGAATGGTCGCACCAGCCGCCCGGTGAAAGCTTACCTGGCCAGCAATCAGGTGTATCAGCAGGATATGAAAACATTAACGGATATGCGCCCCGGTGCGGCAAAAGGGGTGGGGATCCGTATCGGACGCCATGCTGATATGAATAATAACAGTGCTGTCATTATCAACCCGCCGGGCAGGCAGGTCCGGTCAGATTCCTATCTGTTTGAGTGGGGAAAAAATACATTTATTGAAGTGAATAACGGGTTGAATCTCTGGGCGTATTACTATGTTTATGATGCGGCAAAGCTCAGTGCGGGGCGGATTAACACCACCGCTATCCTGAATTTCGAATATTACTAATAATGAACACTGATACAGAACGACATAAAAAACCGCATAAAAAAATGAAA