Homologs in group_3079

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18845 FBDBKF_18845 100.0 Morganella morganii S1 cbiQ energy-coupling factor ABC transporter transmembrane protein
EHELCC_17040 EHELCC_17040 100.0 Morganella morganii S2 cbiQ energy-coupling factor ABC transporter transmembrane protein
NLDBIP_18420 NLDBIP_18420 100.0 Morganella morganii S4 cbiQ energy-coupling factor ABC transporter transmembrane protein
HKOGLL_08755 HKOGLL_08755 100.0 Morganella morganii S5 cbiQ energy-coupling factor ABC transporter transmembrane protein
F4V73_RS13750 F4V73_RS13750 89.8 Morganella psychrotolerans - energy-coupling factor ABC transporter transmembrane protein

Distribution of the homologs in the orthogroup group_3079

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3079

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q05598 8.01e-94 276 58 0 225 1 cbiQ Cobalt transport protein CbiQ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
D5AUZ7 5.24e-21 90 31 4 227 1 cbiQ Cobalt transport protein CbiQ Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
A2SSD6 5.39e-18 85 26 2 219 3 cbiMQ Putative fused cobalt transport protein CbiMQ Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z)
Q58489 4e-12 67 21 4 224 3 MJ1089 Uncharacterized protein MJ1089 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_09205
Feature type CDS
Gene cbiQ
Product energy-coupling factor ABC transporter transmembrane protein
Location 176201 - 176878 (strand: 1)
Length 678 (nucleotides) / 225 (amino acids)

Contig

Accession ZDB_365
Length 192330 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3079
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF02361 Cobalt transport protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0619 Coenzyme transport and metabolism (H) H ECF-type transporter transmembrane protein EcfT

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02008 cobalt/nickel transport system permease protein ABC transporters -

Protein Sequence

MQSLDALSYQSRWRQRDPGMKFTFWVVMMVLAMSLPPAGQAALLLCIAAFTCWLLRVSPLRYLKWLLIPFSFLAVGLVAIIISFARTPDTLLWGIQIGQYWVGLDPAGLTTANQTFWRSMAALAATFWFMLNMPFEQLIKLMKRGRLPLVLIEQILLTWRFIFIFLEEAATIYHAQSLRFGYRNLRTGYRSLAMLVTMLFSRVMMRYQQMSVALNVKLYQGDFHL

Flanking regions ( +/- flanking 50bp)

CACTGCAGTGATTTTCTACGTGCTCGGTTACTACCGCAGCGGCCGGAAAAATGCAAAGCCTTGATGCGCTGAGTTATCAAAGCCGCTGGCGTCAGCGTGACCCGGGGATGAAGTTTACCTTCTGGGTCGTGATGATGGTTCTGGCGATGAGCCTGCCGCCGGCAGGCCAGGCGGCTTTATTGCTGTGTATTGCGGCGTTTACCTGCTGGTTACTGCGGGTATCGCCGCTCCGCTATCTTAAATGGCTGCTGATCCCGTTCAGTTTTCTGGCGGTGGGTCTGGTGGCCATTATTATCTCATTTGCCCGCACACCGGACACTCTGCTGTGGGGCATTCAGATTGGTCAGTACTGGGTTGGCCTTGATCCCGCCGGTCTGACAACTGCCAATCAGACCTTCTGGCGCAGCATGGCGGCTCTCGCTGCCACCTTCTGGTTTATGCTCAATATGCCGTTTGAGCAGCTGATTAAACTGATGAAACGCGGCCGTCTGCCGCTGGTGCTGATCGAGCAGATCCTGCTGACCTGGCGCTTTATCTTTATTTTTCTGGAAGAAGCCGCCACCATTTATCACGCACAATCCCTGCGCTTCGGCTACCGCAACCTGCGCACCGGCTACCGCTCACTGGCTATGCTGGTTACCATGCTGTTTTCCCGCGTGATGATGCGCTATCAGCAAATGTCCGTCGCACTGAATGTGAAGCTCTATCAGGGAGATTTCCACCTATGAATCATCACCCTCAATTATCGGTCAGCGGTCTCACATTCCGCTATCAGGAC