Homologs in group_3079

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18845 FBDBKF_18845 89.8 Morganella morganii S1 cbiQ energy-coupling factor ABC transporter transmembrane protein
EHELCC_17040 EHELCC_17040 89.8 Morganella morganii S2 cbiQ energy-coupling factor ABC transporter transmembrane protein
NLDBIP_18420 NLDBIP_18420 89.8 Morganella morganii S4 cbiQ energy-coupling factor ABC transporter transmembrane protein
LHKJJB_09205 LHKJJB_09205 89.8 Morganella morganii S3 cbiQ energy-coupling factor ABC transporter transmembrane protein
HKOGLL_08755 HKOGLL_08755 89.8 Morganella morganii S5 cbiQ energy-coupling factor ABC transporter transmembrane protein

Distribution of the homologs in the orthogroup group_3079

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3079

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q05598 1.33e-92 273 58 0 225 1 cbiQ Cobalt transport protein CbiQ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
D5AUZ7 1.63e-20 89 31 4 227 1 cbiQ Cobalt transport protein CbiQ Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
A2SSD6 1.9e-16 80 27 4 222 3 cbiMQ Putative fused cobalt transport protein CbiMQ Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z)
Q58489 4e-12 67 25 6 225 3 MJ1089 Uncharacterized protein MJ1089 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13750
Feature type CDS
Gene -
Product energy-coupling factor ABC transporter transmembrane protein
Location 383749 - 384426 (strand: 1)
Length 678 (nucleotides) / 225 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000003
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3079
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF02361 Cobalt transport protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0619 Coenzyme transport and metabolism (H) H ECF-type transporter transmembrane protein EcfT

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02008 cobalt/nickel transport system permease protein ABC transporters -

Protein Sequence

MQSLDALSYQSRWRQRDPRAKFALYVLMMVLAMSLPPAGQAALLIIIAAFTCWLLRVSPLRYLKWLLIPFSFLAVGLVAIIISFARQPDVLLWSIQTGKYWIGLDPAGIATANLTFWRSMAALAATFWFMLNMPFEQLIKLMKHGRIPLVLIEQILLTWRFIFIFLEEAAIIYHAQSLRFGYRNLRTGYRSLAMLVTMLFSRVMMRYQQMSVALDVKLYQGNFHI

Flanking regions ( +/- flanking 50bp)

CACCGCAGTTATTTTCTACGTGCTCGGTTATTACCGCAGCGGCCGGAAAAATGCAAAGCCTTGATGCGCTGAGTTACCAAAGCCGCTGGCGTCAGCGTGATCCGAGGGCGAAATTCGCCCTCTACGTTCTGATGATGGTGCTGGCGATGAGCCTGCCTCCGGCAGGCCAGGCGGCTTTACTTATTATTATCGCAGCTTTTACCTGCTGGTTATTGCGGGTATCACCGCTGCGCTATCTGAAATGGCTGCTGATCCCGTTCAGTTTTCTGGCGGTCGGTCTGGTGGCGATTATTATTTCCTTTGCCCGCCAGCCGGATGTCTTACTGTGGAGTATTCAGACCGGAAAGTACTGGATAGGATTAGATCCCGCAGGTATCGCAACGGCAAATCTGACATTCTGGCGCAGTATGGCGGCTCTTGCCGCGACATTCTGGTTTATGCTCAATATGCCGTTTGAACAGCTGATTAAACTGATGAAACACGGACGCATTCCGCTGGTGCTTATCGAACAAATTCTGCTGACCTGGCGGTTTATTTTTATCTTTCTGGAAGAAGCGGCAATCATTTATCACGCACAGTCTCTGCGCTTCGGCTACCGCAACCTGCGTACCGGCTACCGCTCGCTGGCGATGCTGGTAACCATGCTGTTTTCCAGAGTCATGATGCGCTATCAGCAAATGTCAGTTGCACTCGATGTGAAGTTATATCAGGGGAATTTTCATATATGAACCAGCGCCCTCAATTAGCCGTTAATGACCTTACTTTTCGCTATCAGGAT