COG0619


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0619, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ECF-type transporter transmembrane protein EcfT
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG0619 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3313 FBDBKF_10830 134212 134928 -1 ecfT ECF-type transporter transmembrane protein EcfT Morganella morganii S1
1 group_3079 FBDBKF_18845 15451 16128 -1 cbiQ energy-coupling factor ABC transporter transmembrane protein Morganella morganii S1
2 group_3079 EHELCC_17040 15452 16129 -1 cbiQ energy-coupling factor ABC transporter transmembrane protein Morganella morganii S2
3 group_3313 NLDBIP_14995 134202 134918 -1 ecfT ECF-type transporter transmembrane protein EcfT Morganella morganii S4
4 group_3079 NLDBIP_18420 15451 16128 -1 cbiQ energy-coupling factor ABC transporter transmembrane protein Morganella morganii S4
5 group_3079 LHKJJB_09205 176201 176878 1 cbiQ energy-coupling factor ABC transporter transmembrane protein Morganella morganii S3
6 group_3313 LHKJJB_14350 6808 7524 1 ecfT ECF-type transporter transmembrane protein EcfT Morganella morganii S3
7 group_3079 HKOGLL_08755 176201 176878 1 cbiQ energy-coupling factor ABC transporter transmembrane protein Morganella morganii S5
8 group_3313 HKOGLL_12970 6808 7524 1 ecfT ECF-type transporter transmembrane protein EcfT Morganella morganii S5
9 group_4056 F4V73_RS06475 1349804 1350508 -1 energy-coupling factor transporter transmembrane component T Morganella psychrotolerans
10 group_3079 F4V73_RS13750 383749 384426 1 energy-coupling factor ABC transporter transmembrane protein Morganella psychrotolerans
11 group_3313 F4V73_RS16920 6677 7393 1 energy-coupling factor transporter transmembrane component T Morganella psychrotolerans