COG0619
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0619, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 12 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description |
ECF-type transporter transmembrane protein EcfT |
Function(s) descr. |
Coenzyme transport and metabolism (H) |
Occurence in the database
COG0619 is associated with 12 different proteins (see tab "Protein list" and "Profile") |
The 12 proteins are classified into 3 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_3313 |
FBDBKF_10830 |
134212 |
134928 |
-1 |
ecfT |
ECF-type transporter transmembrane protein EcfT |
Morganella morganii S1 |
1 |
group_3079 |
FBDBKF_18845 |
15451 |
16128 |
-1 |
cbiQ |
energy-coupling factor ABC transporter transmembrane protein |
Morganella morganii S1 |
2 |
group_3079 |
EHELCC_17040 |
15452 |
16129 |
-1 |
cbiQ |
energy-coupling factor ABC transporter transmembrane protein |
Morganella morganii S2 |
3 |
group_3313 |
NLDBIP_14995 |
134202 |
134918 |
-1 |
ecfT |
ECF-type transporter transmembrane protein EcfT |
Morganella morganii S4 |
4 |
group_3079 |
NLDBIP_18420 |
15451 |
16128 |
-1 |
cbiQ |
energy-coupling factor ABC transporter transmembrane protein |
Morganella morganii S4 |
5 |
group_3079 |
LHKJJB_09205 |
176201 |
176878 |
1 |
cbiQ |
energy-coupling factor ABC transporter transmembrane protein |
Morganella morganii S3 |
6 |
group_3313 |
LHKJJB_14350 |
6808 |
7524 |
1 |
ecfT |
ECF-type transporter transmembrane protein EcfT |
Morganella morganii S3 |
7 |
group_3079 |
HKOGLL_08755 |
176201 |
176878 |
1 |
cbiQ |
energy-coupling factor ABC transporter transmembrane protein |
Morganella morganii S5 |
8 |
group_3313 |
HKOGLL_12970 |
6808 |
7524 |
1 |
ecfT |
ECF-type transporter transmembrane protein EcfT |
Morganella morganii S5 |
9 |
group_4056 |
F4V73_RS06475 |
1349804 |
1350508 |
-1 |
|
energy-coupling factor transporter transmembrane component T |
Morganella psychrotolerans |
10 |
group_3079 |
F4V73_RS13750 |
383749 |
384426 |
1 |
|
energy-coupling factor ABC transporter transmembrane protein |
Morganella psychrotolerans |
11 |
group_3313 |
F4V73_RS16920 |
6677 |
7393 |
1 |
|
energy-coupling factor transporter transmembrane component T |
Morganella psychrotolerans |