Homologs in group_3086

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18880 FBDBKF_18880 100.0 Morganella morganii S1 cbiG Cobalamin biosynthesis protein CbiG
EHELCC_17075 EHELCC_17075 100.0 Morganella morganii S2 cbiG Cobalamin biosynthesis protein CbiG
NLDBIP_18455 NLDBIP_18455 100.0 Morganella morganii S4 cbiG Cobalamin biosynthesis protein CbiG
HKOGLL_08720 HKOGLL_08720 100.0 Morganella morganii S5 cbiG Cobalamin biosynthesis protein CbiG
F4V73_RS13715 F4V73_RS13715 83.9 Morganella psychrotolerans - cobalt-precorrin 5A hydrolase

Distribution of the homologs in the orthogroup group_3086

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3086

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q05631 3.18e-137 397 56 1 350 3 cbiG Cobalt-precorrin-5A hydrolase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O87697 7.18e-40 147 34 12 312 1 cbiG Cobalt-precorrin-5A hydrolase Priestia megaterium
Q58544 8.09e-25 105 26 11 356 3 cbiG Probable cobalt-precorrin-5A hydrolase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P21635 1.28e-06 51 33 1 98 4 cobE Protein CobE Sinorhizobium sp.

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_09170
Feature type CDS
Gene cbiG
Product Cobalamin biosynthesis protein CbiG
Location 171083 - 172150 (strand: 1)
Length 1068 (nucleotides) / 355 (amino acids)

Contig

Accession ZDB_365
Length 192330 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3086
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF01890 Cobalamin synthesis G C-terminus
PF11760 Cobalamin synthesis G N-terminal
PF11761 Cobalamin biosynthesis central region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2073 Coenzyme transport and metabolism (H) H Cobalamin biosynthesis protein CbiG

Kegg Ortholog Annotation(s)

Protein Sequence

MSTAKPRGKRIALFCLTPGGKALAEKIRPLLPVTCYTSEKLVSDGFKPFRDGFAATLQQAFAENDALIVIGATGITVRVLAPVIQDKMSDPAVIVMDEKGQHVISLLSGHLGGANELATWLAGRIGGQAVITTATDVNQVTSFDLLAQEMNATFTDFRATVKTLNQMMVSGDRIGIWWHPDMAAEQDKYALPGLIPVADLRTLPELDALVCVSYRREEVMLPVPVYKLIPRRIIAGMGCRRDTGADEVQQLFAEQLAENNLLPEAVRAIGSITLKAQEPALLALAARYQVPFTVFSAEELAPVAAQFPESEFVKKTTGVGSVSRPVAWLMSKGCLIGQTCKTRGITITLGAETVC

Flanking regions ( +/- flanking 50bp)

CCTCGGCGACGAGTATCACTATTCAAAACTGTATGACGCAGGCTTCAGCCATGAGTACCGCAAAGCCTCGCGGTAAGCGCATTGCGCTGTTTTGCCTGACACCGGGCGGCAAAGCGCTGGCGGAAAAAATCCGCCCGCTGCTGCCGGTGACCTGTTACACCAGCGAAAAACTGGTGTCGGATGGCTTTAAACCGTTCCGTGACGGCTTTGCCGCCACCTTACAGCAGGCATTTGCAGAGAATGACGCCCTGATTGTCATCGGCGCGACCGGCATTACCGTGCGGGTACTGGCACCGGTGATTCAGGACAAAATGAGTGACCCTGCCGTGATCGTGATGGATGAGAAAGGACAGCATGTGATCAGTCTGCTCTCCGGCCATCTCGGCGGTGCCAATGAGCTGGCCACCTGGCTGGCAGGCCGGATCGGCGGACAGGCGGTGATCACCACCGCCACCGATGTCAATCAGGTCACCAGTTTTGATCTGCTGGCGCAGGAGATGAATGCCACGTTCACCGATTTCCGCGCCACCGTCAAAACCCTGAACCAGATGATGGTCAGCGGGGATCGTATCGGCATCTGGTGGCATCCGGATATGGCGGCAGAGCAGGATAAATACGCCTTACCGGGGCTTATCCCGGTGGCGGATCTGCGCACTCTGCCGGAACTGGATGCGCTGGTGTGCGTCAGTTACCGCCGCGAGGAAGTGATGCTGCCGGTGCCGGTATATAAACTGATCCCGCGCCGGATTATTGCCGGTATGGGCTGTCGCAGAGATACCGGGGCAGACGAGGTTCAGCAGCTGTTTGCTGAACAGCTGGCTGAGAACAATCTGCTGCCGGAAGCCGTCCGCGCTATCGGCAGTATTACCCTGAAAGCACAGGAGCCCGCCCTGCTGGCGCTCGCTGCCCGCTATCAGGTGCCGTTTACCGTATTCAGTGCTGAGGAACTTGCCCCTGTGGCGGCACAGTTCCCGGAATCAGAATTTGTTAAAAAAACCACGGGTGTCGGGAGTGTATCCCGGCCGGTCGCCTGGCTGATGAGCAAAGGCTGTCTGATAGGGCAAACCTGTAAGACCCGGGGGATCACCATTACGTTAGGAGCAGAAACAGTATGTTAACCGTTATAGGCATTGGCCCCGGCAGTGAAGCCATGATGACCGAAGAAGCC