Homologs in group_2441

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19290 FBDBKF_19290 100.0 Morganella morganii S1 hybE hydrogenase-2 assembly chaperone
EHELCC_07575 EHELCC_07575 100.0 Morganella morganii S2 hybE hydrogenase-2 assembly chaperone
NLDBIP_07900 NLDBIP_07900 100.0 Morganella morganii S4 hybE hydrogenase-2 assembly chaperone
HKOGLL_03495 HKOGLL_03495 100.0 Morganella morganii S5 hybE hydrogenase-2 assembly chaperone
F4V73_RS12050 F4V73_RS12050 78.5 Morganella psychrotolerans hybE hydrogenase-2 assembly chaperone
PMI_RS00175 PMI_RS00175 45.0 Proteus mirabilis HI4320 hybE hydrogenase-2 assembly chaperone

Distribution of the homologs in the orthogroup group_2441

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2441

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AAN1 6.63e-83 244 72 1 157 1 hybE Hydrogenase-2 operon protein HybE Escherichia coli (strain K12)
P0AAN2 6.63e-83 244 72 1 157 3 hybE Hydrogenase-2 operon protein HybE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8XBW0 9.72e-82 241 71 1 157 3 hybE Hydrogenase-2 operon protein HybE Escherichia coli O157:H7
P48341 4.46e-07 50 25 1 96 3 hupJ Hydrogenase expression/formation protein HupJ Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
P28152 1.14e-06 49 28 2 102 3 hupJ Hydrogenase expression/formation protein HupJ Rhizobium leguminosarum bv. viciae
Q43958 4.55e-06 47 29 6 148 3 hupT Hydrogenase expression/formation protein HupT Azotobacter chroococcum mcd 1
P30781 2.03e-05 45 29 4 141 3 hoxT Hydrogenase expression/formation protein HoxT Azotobacter vinelandii
Q03009 0.000266 43 24 0 91 3 hupJ Probable rubredoxin HupJ Rhodobacter capsulatus

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_07435
Feature type CDS
Gene hybE
Product hydrogenase-2 assembly chaperone
Location 216709 - 217200 (strand: 1)
Length 492 (nucleotides) / 163 (amino acids)
In genomic island -

Contig

Accession ZDB_363
Length 233386 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2441
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE

Protein Sequence

MSEDIQGFMHSPAEQIRNAFEKVAADTMHDLTFLHPSMPVYVTELTLFEGQWTGCVITPWMFSAVIFPGPEQLWPQRKVSEKIGLRLPYGIMTFTVGELEGVSQYLACSLLSPLPHTLSPQEGMRLADDSARMLLSLPVTDPDAPAMAGRRALFTGKPVPRHA

Flanking regions ( +/- flanking 50bp)

GGCTGTACTGCGTGAATCAGGTGTTGAGGCGGTGAAGAAGGAGACGGCAGATGTCTGAGGATATTCAGGGCTTTATGCACAGCCCGGCAGAACAGATCCGCAACGCGTTTGAAAAAGTAGCGGCGGATACTATGCACGATCTCACCTTCCTGCACCCGTCAATGCCGGTTTATGTCACGGAACTGACGCTGTTTGAAGGGCAGTGGACGGGTTGTGTGATCACGCCGTGGATGTTCAGTGCCGTGATTTTTCCGGGGCCGGAGCAGCTCTGGCCGCAGCGTAAAGTCAGTGAAAAAATCGGCCTGCGGCTGCCGTACGGCATCATGACATTCACCGTCGGTGAGCTGGAGGGCGTATCTCAGTATCTGGCGTGTTCGCTGCTGTCGCCGTTGCCGCATACACTGTCACCGCAGGAAGGGATGCGGCTGGCGGATGACAGTGCGCGTATGCTGCTTTCACTGCCGGTCACGGACCCGGATGCTCCGGCGATGGCCGGGCGCAGGGCGCTGTTTACCGGAAAACCGGTACCCCGGCATGCATGAGTTATCCCTGTGCATGAGTGCGGCGGACATTATCCGCGAACAGGCTGAAC